RNA–Protein interactions for RNA: ENST00000476494.1

CLDN4-205, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-205ENST00000476494 ROCK2O75116 1388 aaKnown RBP8.97□□□□□ -0.97
CLDN4-205ENST00000476494 SPTBN5Q9NRC6 3674 aaKnown RBP8.96□□□□□ -0.97
CLDN4-205ENST00000476494 INTS3Q68E01 1043 aaKnown RBP8.96□□□□□ -0.98
CLDN4-205ENST00000476494 CNBD1Q8NA66 436 aa8.96□□□□□ -0.98
CLDN4-205ENST00000476494 HDAC9Q9UKV0 1011 aa8.96□□□□□ -0.98
CLDN4-205ENST00000476494 GPR25O00155 361 aa8.95□□□□□ -0.98
CLDN4-205ENST00000476494 TBC1D8O95759 1140 aa8.95□□□□□ -0.98
CLDN4-205ENST00000476494 ZNF157P51786 506 aaPredicted RBP8.95□□□□□ -0.98
CLDN4-205ENST00000476494 USP48Q86UV5 1035 aa8.95□□□□□ -0.98
CLDN4-205ENST00000476494 REM2Q8IYK8 340 aaPredicted RBP8.95□□□□□ -0.98
CLDN4-205ENST00000476494 TRPM4Q8TD43 1214 aa8.95□□□□□ -0.98
CLDN4-205ENST00000476494 GBA2Q9HCG7 927 aaPredicted RBP8.95□□□□□ -0.98
CLDN4-205ENST00000476494 ST20-MTHFSA0A0A6YYL1 179 aa8.94□□□□□ -0.98
CLDN4-205ENST00000476494 MTHFSP49914 203 aa8.94□□□□□ -0.98
CLDN4-205ENST00000476494 CXCL9Q07325 125 aa8.94□□□□□ -0.98
CLDN4-205ENST00000476494 CHRDL2Q6WN34 429 aa8.94□□□□□ -0.98
CLDN4-205ENST00000476494 SLC51AQ86UW1 340 aa8.94□□□□□ -0.98
CLDN4-205ENST00000476494 R3HDMLQ9H3Y0 253 aa8.94□□□□□ -0.98
CLDN4-205ENST00000476494 SOX1O00570 391 aaPredicted RBP8.93□□□□□ -0.98
CLDN4-205ENST00000476494 CAMTA2O94983 1202 aa8.93□□□□□ -0.98
CLDN4-205ENST00000476494 CANXP27824 592 aaKnown RBP8.93□□□□□ -0.98
CLDN4-205ENST00000476494 SLC39A6Q13433 755 aa8.93□□□□□ -0.98
CLDN4-205ENST00000476494 ZNF530Q6P9A1 599 aaPredicted RBP8.93□□□□□ -0.98
CLDN4-205ENST00000476494 VSIG10Q8N0Z9 540 aa8.93□□□□□ -0.98
CLDN4-205ENST00000476494 TESK2Q96S53 571 aa8.93□□□□□ -0.98
CLDN4-205ENST00000476494 SETDB2Q96T68 719 aa8.93□□□□□ -0.98
CLDN4-205ENST00000476494 CFHR5Q9BXR6 569 aa8.93□□□□□ -0.98
CLDN4-205ENST00000476494 PRDM6Q9NQX0 595 aa8.93□□□□□ -0.98
CLDN4-205ENST00000476494 TBC1D2BQ9UPU7 963 aa8.93□□□□□ -0.98
CLDN4-205ENST00000476494 NPC1L1Q9UHC9 1359 aa8.92□□□□□ -0.98
CLDN4-205ENST00000476494 A0A087WZG4 1122 aa8.92□□□□□ -0.98
CLDN4-205ENST00000476494 SHTN1A0MZ66 631 aa8.92□□□□□ -0.98
CLDN4-205ENST00000476494 GMPSP49915 693 aaPredicted RBP8.92□□□□□ -0.98
CLDN4-205ENST00000476494 ST5P78524 1137 aa8.92□□□□□ -0.98
CLDN4-205ENST00000476494 EIF4A2Q14240 407 aaKnown RBP8.92□□□□□ -0.98
CLDN4-205ENST00000476494 PLEKHO1Q53GL0 409 aaPredicted RBP8.92□□□□□ -0.98
CLDN4-205ENST00000476494 RASAL3Q86YV0 1011 aa8.92□□□□□ -0.98
CLDN4-205ENST00000476494 C2orf69Q8N8R5 385 aa8.92□□□□□ -0.98
CLDN4-205ENST00000476494 ARMC5Q96C12 935 aa8.92□□□□□ -0.98
CLDN4-205ENST00000476494 KIF20BQ96Q89 1820 aa8.91□□□□□ -0.98
CLDN4-205ENST00000476494 ERBB4Q15303 1308 aa8.91□□□□□ -0.98
CLDN4-205ENST00000476494 CDHR2Q9BYE9 1310 aa8.91□□□□□ -0.98
CLDN4-205ENST00000476494 TM4SF4P48230 202 aa8.91□□□□□ -0.98
CLDN4-205ENST00000476494 AMOTQ4VCS5 1084 aa8.91□□□□□ -0.98
CLDN4-205ENST00000476494 CC2D2BQ6DHV5 1058 aa8.91□□□□□ -0.98
CLDN4-205ENST00000476494 LARGE2Q8N3Y3 721 aa8.91□□□□□ -0.98
CLDN4-205ENST00000476494 SLC52A2Q9HAB3 445 aa8.91□□□□□ -0.98
CLDN4-205ENST00000476494 POLKQ9UBT6 870 aa8.91□□□□□ -0.98
CLDN4-205ENST00000476494 MUC3AQ02505 3323 aa8.91□□□□□ -0.98
CLDN4-205ENST00000476494 UBR2Q8IWV8 1755 aa8.91□□□□□ -0.98
CLDN4-205ENST00000476494 FKTNO75072 461 aa8.9□□□□□ -0.98
CLDN4-205ENST00000476494 ALDH1B1P30837 517 aa8.9□□□□□ -0.98
CLDN4-205ENST00000476494 CRY2Q49AN0 593 aa8.9□□□□□ -0.98
CLDN4-205ENST00000476494 OTOP1Q7RTM1 612 aa8.9□□□□□ -0.98
CLDN4-205ENST00000476494 LGR6Q9HBX8 967 aa8.9□□□□□ -0.98
CLDN4-205ENST00000476494 MRC1P22897 1456 aa8.89□□□□□ -0.99
CLDN4-205ENST00000476494 PPM1GO15355 546 aaPredicted RBP8.89□□□□□ -0.99
CLDN4-205ENST00000476494 EGFRP00533 1210 aa8.89□□□□□ -0.99
CLDN4-205ENST00000476494 LRCH3Q96II8 777 aa8.89□□□□□ -0.99
CLDN4-205ENST00000476494 ADM5C9JUS6 153 aa8.88□□□□□ -0.99
CLDN4-205ENST00000476494 IL6STP40189 918 aaPredicted RBP8.88□□□□□ -0.99
CLDN4-205ENST00000476494 CAP1Q01518 475 aa8.88□□□□□ -0.99
CLDN4-205ENST00000476494 KRT26Q7Z3Y9 468 aa8.88□□□□□ -0.99
CLDN4-205ENST00000476494 NIM1KQ8IY84 436 aa8.88□□□□□ -0.99
CLDN4-205ENST00000476494 CARD14Q9BXL6 1004 aa8.88□□□□□ -0.99
CLDN4-205ENST00000476494 CNOT7Q9UIV1 285 aaKnown RBP8.88□□□□□ -0.99
CLDN4-205ENST00000476494 ZNRF3Q9ULT6 936 aa8.88□□□□□ -0.99
CLDN4-205ENST00000476494 TTC28Q96AY4 2481 aa8.87□□□□□ -0.99
CLDN4-205ENST00000476494 HOXA10P31260 410 aaPredicted RBP8.87□□□□□ -0.99
CLDN4-205ENST00000476494 GRIPAP1Q4V328 841 aa8.87□□□□□ -0.99
CLDN4-205ENST00000476494 NBPF5PQ86XG9 351 aaPredicted RBP8.87□□□□□ -0.99
CLDN4-205ENST00000476494 VPS33BQ9H267 617 aa8.87□□□□□ -0.99
CLDN4-205ENST00000476494 STXBP5LQ9Y2K9 1186 aa8.87□□□□□ -0.99
CLDN4-205ENST00000476494 PTPN22Q9Y2R2 807 aa8.87□□□□□ -0.99
CLDN4-205ENST00000476494 LAMB4A4D0S4 1761 aa8.86□□□□□ -0.99
CLDN4-205ENST00000476494 STARD3NLO95772 234 aa8.86□□□□□ -0.99
CLDN4-205ENST00000476494 AOC3Q16853 763 aa8.86□□□□□ -0.99
CLDN4-205ENST00000476494 C1orf141Q5JVX7 400 aa8.86□□□□□ -0.99
CLDN4-205ENST00000476494 CLEC4GQ6UXB4 293 aa8.86□□□□□ -0.99
CLDN4-205ENST00000476494 SAMD7Q7Z3H4 446 aa8.86□□□□□ -0.99
CLDN4-205ENST00000476494 AEBP1Q8IUX7 1158 aa8.86□□□□□ -0.99
CLDN4-205ENST00000476494 MPNDQ8N594 471 aa8.86□□□□□ -0.99
CLDN4-205ENST00000476494 RTFDC1Q9BY42 306 aaPredicted RBP8.86□□□□□ -0.99
CLDN4-205ENST00000476494 TRIM17Q9Y577 477 aa8.86□□□□□ -0.99
CLDN4-205ENST00000476494 EYSQ5T1H1 3165 aa8.86□□□□□ -0.99
CLDN4-205ENST00000476494 PRUNE2Q8WUY3 3088 aa8.86□□□□□ -0.99
CLDN4-205ENST00000476494 A0A1W2PPC1 479 aa8.85□□□□□ -0.99
CLDN4-205ENST00000476494 YDJCA8MPS7 323 aa8.85□□□□□ -0.99
CLDN4-205ENST00000476494 NPHP1O15259 732 aa8.85□□□□□ -0.99
CLDN4-205ENST00000476494 RNMTO43148 476 aaKnown RBP8.85□□□□□ -0.99
CLDN4-205ENST00000476494 PPIP5K2O43314 1243 aa8.85□□□□□ -0.99
CLDN4-205ENST00000476494 COL9A1P20849 921 aa8.85□□□□□ -0.99
CLDN4-205ENST00000476494 GPR153Q6NV75 609 aa8.85□□□□□ -0.99
CLDN4-205ENST00000476494 TPTE2Q6XPS3 522 aa8.85□□□□□ -0.99
CLDN4-205ENST00000476494 ZNF333Q96JL9 665 aa8.85□□□□□ -0.99
CLDN4-205ENST00000476494 KDM3BQ7LBC6 1761 aa8.85□□□□□ -0.99
CLDN4-205ENST00000476494 KIF7Q2M1P5 1343 aa8.84□□□□□ -0.99
CLDN4-205ENST00000476494 RAD17O75943 681 aa8.84□□□□□ -0.99
CLDN4-205ENST00000476494 A1BGP04217 495 aa8.84□□□□□ -0.99
CLDN4-205ENST00000476494 HOXD11P31277 338 aaPredicted RBP8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms