RNA–Protein interactions for RNA: ENST00000476041.1

LSM10-202, Transcript of LSM10, U7 small nuclear RNA associated, humanhuman

TSL 3

Gene LSM10, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM10-202ENST00000476041 HSPA1AP0DMV8 641 aaKnown RBP18.41■□□□□ 0.54
LSM10-202ENST00000476041 HSPA1BP0DMV9 641 aaKnown RBP18.41■□□□□ 0.54
LSM10-202ENST00000476041 FKBP4Q02790 459 aaKnown RBP eCLIP18.41■□□□□ 0.54
LSM10-202ENST00000476041 RTKN2Q8IZC4 609 aa18.41■□□□□ 0.54
LSM10-202ENST00000476041 HOXA10P31260 410 aaPredicted RBP18.4■□□□□ 0.54
LSM10-202ENST00000476041 KRT24Q2M2I5 525 aa18.4■□□□□ 0.54
LSM10-202ENST00000476041 OLFM4Q6UX06 510 aa18.4■□□□□ 0.54
LSM10-202ENST00000476041 PPP1R42Q7Z4L9 355 aa18.4■□□□□ 0.54
LSM10-202ENST00000476041 DDX21Q9NR30 783 aaKnown RBP eCLIP18.4■□□□□ 0.54
LSM10-202ENST00000476041 ANKRD36CQ5JPF3 1778 aa18.4■□□□□ 0.54
LSM10-202ENST00000476041 SNED1Q8TER0 1413 aa18.4■□□□□ 0.54
LSM10-202ENST00000476041 LAS1LQ9Y4W2 734 aaKnown RBP18.39■□□□□ 0.53
LSM10-202ENST00000476041 HOXB7P09629 217 aa18.38■□□□□ 0.53
LSM10-202ENST00000476041 COPS6Q7L5N1 327 aa18.38■□□□□ 0.53
LSM10-202ENST00000476041 XAGE3Q8WTP9 111 aa18.38■□□□□ 0.53
LSM10-202ENST00000476041 NECTIN2Q92692 538 aa18.38■□□□□ 0.53
LSM10-202ENST00000476041 RPGRQ92834 1020 aaKnown RBP18.38■□□□□ 0.53
LSM10-202ENST00000476041 CFAP44Q96MT7 982 aa18.38■□□□□ 0.53
LSM10-202ENST00000476041 DDNO94850 711 aaPredicted RBP18.37■□□□□ 0.53
LSM10-202ENST00000476041 HSP90AB3PQ58FF7 597 aa18.37■□□□□ 0.53
LSM10-202ENST00000476041 SLC10A5Q5PT55 438 aa18.37■□□□□ 0.53
LSM10-202ENST00000476041 CC2D2BQ6DHV5 1058 aa18.37■□□□□ 0.53
LSM10-202ENST00000476041 CRAMP1Q96RY5 1269 aa18.37■□□□□ 0.53
LSM10-202ENST00000476041 ZNF277Q9NRM2 450 aaPredicted RBP18.37■□□□□ 0.53
LSM10-202ENST00000476041 RNF123Q5XPI4 1314 aa18.37■□□□□ 0.53
LSM10-202ENST00000476041 AIMP1Q12904 312 aaKnown RBP18.36■□□□□ 0.53
LSM10-202ENST00000476041 C3orf67Q6ZVT6 689 aa18.36■□□□□ 0.53
LSM10-202ENST00000476041 PSMD1Q99460 953 aa18.36■□□□□ 0.53
LSM10-202ENST00000476041 UTP14AQ9BVJ6 771 aaKnown RBP18.36■□□□□ 0.53
LSM10-202ENST00000476041 IARSP41252 1262 aaKnown RBP18.35■□□□□ 0.53
LSM10-202ENST00000476041 HDGFL1Q5TGJ6 251 aa18.35■□□□□ 0.53
LSM10-202ENST00000476041 SYNE4Q8N205 404 aa18.35■□□□□ 0.53
LSM10-202ENST00000476041 RBM17Q96I25 401 aaKnown RBP18.35■□□□□ 0.53
LSM10-202ENST00000476041 L3MBTL3Q96JM7 780 aaPredicted RBP18.35■□□□□ 0.53
LSM10-202ENST00000476041 NLRP3Q96P20 1036 aa18.35■□□□□ 0.53
LSM10-202ENST00000476041 CHPF2Q9P2E5 772 aa18.35■□□□□ 0.53
LSM10-202ENST00000476041 APAF1O14727 1248 aa18.34■□□□□ 0.53
LSM10-202ENST00000476041 ZNF853P0CG23 659 aa18.34■□□□□ 0.53
LSM10-202ENST00000476041 TCIRG1Q13488 830 aa18.34■□□□□ 0.53
LSM10-202ENST00000476041 GRIPAP1Q4V328 841 aa18.34■□□□□ 0.53
LSM10-202ENST00000476041 NLRP10Q86W26 655 aa18.34■□□□□ 0.53
LSM10-202ENST00000476041 MBIPQ9NS73 344 aa18.34■□□□□ 0.53
LSM10-202ENST00000476041 SCN4AP35499 1836 aa18.34■□□□□ 0.53
LSM10-202ENST00000476041 ZNF541Q9H0D2 1346 aa18.33■□□□□ 0.53
LSM10-202ENST00000476041 DBF4Q9UBU7 674 aaPredicted RBP18.33■□□□□ 0.52
LSM10-202ENST00000476041 IQCA1LA6NCM1 817 aa18.32■□□□□ 0.52
LSM10-202ENST00000476041 FZD9O00144 591 aa18.32■□□□□ 0.52
LSM10-202ENST00000476041 DUSP27Q5VZP5 1158 aa18.32■□□□□ 0.52
LSM10-202ENST00000476041 PLBD2Q8NHP8 589 aa18.32■□□□□ 0.52
LSM10-202ENST00000476041 IFT57Q9NWB7 429 aa18.32■□□□□ 0.52
LSM10-202ENST00000476041 LAMB2P55268 1798 aa18.32■□□□□ 0.52
LSM10-202ENST00000476041 PPEF1O14829 653 aaPredicted RBP18.31■□□□□ 0.52
LSM10-202ENST00000476041 CALD1Q05682 793 aaKnown RBP18.31■□□□□ 0.52
LSM10-202ENST00000476041 GNAI1P63096 354 aa18.3■□□□□ 0.52
LSM10-202ENST00000476041 CHADLQ6NUI6 762 aa18.3■□□□□ 0.52
LSM10-202ENST00000476041 TAF1DQ9H5J8 278 aaPredicted RBP18.3■□□□□ 0.52
LSM10-202ENST00000476041 COL4A5P29400 1685 aa18.3■□□□□ 0.52
LSM10-202ENST00000476041 SH3TC1Q8TE82 1336 aa18.29■□□□□ 0.52
LSM10-202ENST00000476041 POTEIP0CG38 1075 aa18.29■□□□□ 0.52
LSM10-202ENST00000476041 POTEJP0CG39 1038 aa18.29■□□□□ 0.52
LSM10-202ENST00000476041 ZEB1P37275 1124 aaPredicted RBP18.29■□□□□ 0.52
LSM10-202ENST00000476041 ANKRD13DQ6ZTN6 518 aa18.29■□□□□ 0.52
LSM10-202ENST00000476041 SLC51AQ86UW1 340 aa18.29■□□□□ 0.52
LSM10-202ENST00000476041 JDP2Q8WYK2 163 aa18.29■□□□□ 0.52
LSM10-202ENST00000476041 HYPKQ9NX55 129 aa18.29■□□□□ 0.52
LSM10-202ENST00000476041 TRMT112Q9UI30 125 aaKnown RBP18.29■□□□□ 0.52
LSM10-202ENST00000476041 ATP6V0A2Q9Y487 856 aa18.29■□□□□ 0.52
LSM10-202ENST00000476041 ABCC4O15439 1325 aa18.28■□□□□ 0.52
LSM10-202ENST00000476041 HCLS1P14317 486 aaPredicted RBP18.28■□□□□ 0.52
LSM10-202ENST00000476041 ISCA1Q9BUE6 129 aa18.28■□□□□ 0.52
LSM10-202ENST00000476041 TCERG1O14776 1098 aaKnown RBP18.27■□□□□ 0.52
LSM10-202ENST00000476041 FAM161AQ3B820 660 aa18.27■□□□□ 0.52
LSM10-202ENST00000476041 CCDC184Q52MB2 194 aa18.27■□□□□ 0.52
LSM10-202ENST00000476041 LDHDQ86WU2 507 aa18.27■□□□□ 0.52
LSM10-202ENST00000476041 GPC2Q8N158 579 aa18.27■□□□□ 0.52
LSM10-202ENST00000476041 HACL1Q9UJ83 578 aa18.27■□□□□ 0.52
LSM10-202ENST00000476041 DDX60Q8IY21 1712 aaKnown RBP18.26■□□□□ 0.51
LSM10-202ENST00000476041 BBOX1O75936 387 aa18.26■□□□□ 0.51
LSM10-202ENST00000476041 TMX4Q9H1E5 349 aaPredicted RBP18.26■□□□□ 0.51
LSM10-202ENST00000476041 ADAMTSL1Q8N6G6 1762 aa18.25■□□□□ 0.51
LSM10-202ENST00000476041 EIF6P56537 245 aaKnown RBP18.25■□□□□ 0.51
LSM10-202ENST00000476041 TRIM28Q13263 835 aaKnown RBP18.25■□□□□ 0.51
LSM10-202ENST00000476041 SP8Q8IXZ3 490 aa18.25■□□□□ 0.51
LSM10-202ENST00000476041 LARGE2Q8N3Y3 721 aa18.25■□□□□ 0.51
LSM10-202ENST00000476041 VPS33BQ9H267 617 aa18.25■□□□□ 0.51
LSM10-202ENST00000476041 ATP5J2-PTCD1G3V325 749 aa18.24■□□□□ 0.51
LSM10-202ENST00000476041 EPHX2P34913 555 aa18.24■□□□□ 0.51
LSM10-202ENST00000476041 GRAPQ13588 217 aa18.24■□□□□ 0.51
LSM10-202ENST00000476041 DDX46Q7L014 1031 aaKnown RBP18.24■□□□□ 0.51
LSM10-202ENST00000476041 GRAPLQ8TC17 118 aaPredicted RBP18.24■□□□□ 0.51
LSM10-202ENST00000476041 RTFDC1Q9BY42 306 aaPredicted RBP18.24■□□□□ 0.51
LSM10-202ENST00000476041 ELL2O00472 640 aaPredicted RBP18.23■□□□□ 0.51
LSM10-202ENST00000476041 PNMA8AQ86V59 439 aaPredicted RBP18.23■□□□□ 0.51
LSM10-202ENST00000476041 C8orf58Q8NAV2 365 aa18.23■□□□□ 0.51
LSM10-202ENST00000476041 SUPT20HQ8NEM7 779 aa18.23■□□□□ 0.51
LSM10-202ENST00000476041 PASKQ96RG2 1323 aa18.23■□□□□ 0.51
LSM10-202ENST00000476041 TAF1P21675 1872 aa18.22■□□□□ 0.51
LSM10-202ENST00000476041 PPIP5K2O43314 1243 aa18.22■□□□□ 0.51
LSM10-202ENST00000476041 GOLGA2Q08379 1002 aa18.22■□□□□ 0.51
LSM10-202ENST00000476041 SF3B3Q15393 1217 aaKnown RBP18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms