RNA–Protein interactions for RNA: ENST00000475869.2

NBPF3-208, Transcript of NBPF member 3, human

TSL 5

Gene NBPF3, Length 485 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NBPF3-208	ENST00000475869	TOMM70	O94826	608 aa		32.06	■■■□□ 2.72
NBPF3-208	ENST00000475869	ALDH1B1	P30837	517 aa		32.06	■■■□□ 2.72
NBPF3-208	ENST00000475869	HSP90AB3P	Q58FF7	597 aa		32.06	■■■□□ 2.72
NBPF3-208	ENST00000475869	CCDC93	Q567U6	631 aa		32.05	■■■□□ 2.72
NBPF3-208	ENST00000475869	GLTPD2	A6NH11	291 aa		32.04	■■■□□ 2.72
NBPF3-208	ENST00000475869	UTP14A	Q9BVJ6	771 aa	Known RBP	32.04	■■■□□ 2.72
NBPF3-208	ENST00000475869	RRAGC	Q9HB90	399 aa		32.04	■■■□□ 2.72
NBPF3-208	ENST00000475869	HOXA10	P31260	410 aa	Predicted RBP	32.03	■■■□□ 2.72
NBPF3-208	ENST00000475869	TCIRG1	Q13488	830 aa		32.03	■■■□□ 2.72
NBPF3-208	ENST00000475869	OLFM4	Q6UX06	510 aa		32.03	■■■□□ 2.72
NBPF3-208	ENST00000475869	LAMB2	P55268	1798 aa		32.03	■■■□□ 2.72
NBPF3-208	ENST00000475869	C3orf67	Q6ZVT6	689 aa		32.02	■■■□□ 2.72
NBPF3-208	ENST00000475869	NLRP10	Q86W26	655 aa		32.02	■■■□□ 2.72
NBPF3-208	ENST00000475869	RPGR	Q92834	1020 aa	Known RBP	32.02	■■■□□ 2.72
NBPF3-208	ENST00000475869	RNF123	Q5XPI4	1314 aa		32.01	■■■□□ 2.72
NBPF3-208	ENST00000475869	HSPA6	P17066	643 aa		32.01	■■■□□ 2.71
NBPF3-208	ENST00000475869	CCDC27	Q2M243	656 aa		32.01	■■■□□ 2.71
NBPF3-208	ENST00000475869	SLC10A5	Q5PT55	438 aa		32.01	■■■□□ 2.71
NBPF3-208	ENST00000475869	PLBD2	Q8NHP8	589 aa		32.01	■■■□□ 2.71
NBPF3-208	ENST00000475869	HYPK	Q9NX55	129 aa		32.01	■■■□□ 2.71
NBPF3-208	ENST00000475869	SNED1	Q8TER0	1413 aa		32	■■■□□ 2.71
NBPF3-208	ENST00000475869	FKBP4	Q02790	459 aa	Known RBP eCLIP	31.99	■■■□□ 2.71
NBPF3-208	ENST00000475869	ANKRD13D	Q6ZTN6	518 aa		31.99	■■■□□ 2.71
NBPF3-208	ENST00000475869	C8orf58	Q8NAV2	365 aa		31.99	■■■□□ 2.71
NBPF3-208	ENST00000475869	WDR90	Q96KV7	1748 aa		31.99	■■■□□ 2.71
NBPF3-208	ENST00000475869	ELL2	O00472	640 aa	Predicted RBP	31.98	■■■□□ 2.71
NBPF3-208	ENST00000475869	C16orf71	Q8IYS4	520 aa	Predicted RBP	31.98	■■■□□ 2.71
NBPF3-208	ENST00000475869	RTKN2	Q8IZC4	609 aa		31.98	■■■□□ 2.71
NBPF3-208	ENST00000475869	RBM46	Q8TBY0	533 aa	Known RBP	31.98	■■■□□ 2.71
NBPF3-208	ENST00000475869	WWC1	Q8IX03	1113 aa		31.97	■■■□□ 2.71
NBPF3-208	ENST00000475869	NLRP3	Q96P20	1036 aa		31.97	■■■□□ 2.71
NBPF3-208	ENST00000475869	CRAMP1	Q96RY5	1269 aa		31.97	■■■□□ 2.71
NBPF3-208	ENST00000475869	RBM17	Q96I25	401 aa	Known RBP	31.96	■■■□□ 2.71
NBPF3-208	ENST00000475869	DDX60	Q8IY21	1712 aa	Known RBP	31.95	■■■□□ 2.7
NBPF3-208	ENST00000475869	NCBP3	Q53F19	620 aa	Known RBP	31.94	■■■□□ 2.7
NBPF3-208	ENST00000475869	DPY19L2	Q6NUT2	758 aa		31.94	■■■□□ 2.7
NBPF3-208	ENST00000475869	SYNE4	Q8N205	404 aa		31.94	■■■□□ 2.7
NBPF3-208	ENST00000475869	ZNF277	Q9NRM2	450 aa	Predicted RBP	31.94	■■■□□ 2.7
NBPF3-208	ENST00000475869	TRMT112	Q9UI30	125 aa	Known RBP	31.94	■■■□□ 2.7
NBPF3-208	ENST00000475869	VEGFA	P15692	232 aa	Predicted RBP	31.93	■■■□□ 2.7
NBPF3-208	ENST00000475869	TSR2	Q969E8	191 aa	Known RBP	31.93	■■■□□ 2.7
NBPF3-208	ENST00000475869	ISCA1	Q9BUE6	129 aa		31.93	■■■□□ 2.7
NBPF3-208	ENST00000475869	SH3TC1	Q8TE82	1336 aa		31.93	■■■□□ 2.7
NBPF3-208	ENST00000475869	CC2D2B	Q6DHV5	1058 aa		31.92	■■■□□ 2.7
NBPF3-208	ENST00000475869	HCLS1	P14317	486 aa	Predicted RBP	31.91	■■■□□ 2.7
NBPF3-208	ENST00000475869	TSPYL6	Q8N831	410 aa		31.91	■■■□□ 2.7
NBPF3-208	ENST00000475869	PHAX	Q9H814	394 aa	Known RBP	31.91	■■■□□ 2.7
NBPF3-208	ENST00000475869	POTEC	B2RU33	542 aa		31.9	■■■□□ 2.7
NBPF3-208	ENST00000475869	PPEF1	O14829	653 aa	Predicted RBP	31.9	■■■□□ 2.7
NBPF3-208	ENST00000475869	SLC51A	Q86UW1	340 aa		31.9	■■■□□ 2.7
NBPF3-208	ENST00000475869	PSMD1	Q99460	953 aa		31.9	■■■□□ 2.7
NBPF3-208	ENST00000475869	IL16	Q14005	1332 aa		31.9	■■■□□ 2.7
NBPF3-208	ENST00000475869	ATP5J2-PTCD1	G3V325	749 aa		31.89	■■■□□ 2.7
NBPF3-208	ENST00000475869	ZNF428	Q96B54	188 aa		31.89	■■■□□ 2.7
NBPF3-208	ENST00000475869	GOLGA2	Q08379	1002 aa		31.88	■■■□□ 2.69
NBPF3-208	ENST00000475869	FSTL1	Q12841	308 aa		31.88	■■■□□ 2.69
NBPF3-208	ENST00000475869	CCDC30	Q5VVM6	783 aa		31.88	■■■□□ 2.69
NBPF3-208	ENST00000475869	ABCC4	O15439	1325 aa		31.88	■■■□□ 2.69
NBPF3-208	ENST00000475869	IARS	P41252	1262 aa	Known RBP	31.87	■■■□□ 2.69
NBPF3-208	ENST00000475869	CHMP4A	Q9BY43	222 aa		31.87	■■■□□ 2.69
NBPF3-208	ENST00000475869	TAF1	P21675	1872 aa		31.86	■■■□□ 2.69
NBPF3-208	ENST00000475869	DDN	O94850	711 aa	Predicted RBP	31.86	■■■□□ 2.69
NBPF3-208	ENST00000475869	TRIM28	Q13263	835 aa	Known RBP	31.86	■■■□□ 2.69
NBPF3-208	ENST00000475869	GRIPAP1	Q4V328	841 aa		31.86	■■■□□ 2.69
NBPF3-208	ENST00000475869	TCERG1	O14776	1098 aa	Known RBP	31.85	■■■□□ 2.69
NBPF3-208	ENST00000475869	RIC3	Q7Z5B4	369 aa		31.85	■■■□□ 2.69
NBPF3-208	ENST00000475869	COL4A5	P29400	1685 aa		31.84	■■■□□ 2.69
NBPF3-208	ENST00000475869	APLP1	P51693	650 aa		31.84	■■■□□ 2.69
NBPF3-208	ENST00000475869	FAM89A	Q96GI7	184 aa		31.84	■■■□□ 2.69
NBPF3-208	ENST00000475869	ZNF541	Q9H0D2	1346 aa		31.83	■■■□□ 2.69
NBPF3-208	ENST00000475869	SMC1B	Q8NDV3	1235 aa		31.83	■■■□□ 2.69
NBPF3-208	ENST00000475869	ATP6V0A2	Q9Y487	856 aa		31.83	■■■□□ 2.69
NBPF3-208	ENST00000475869	SCN4A	P35499	1836 aa		31.82	■■■□□ 2.68
NBPF3-208	ENST00000475869	SALL2	Q9Y467	1007 aa	Predicted RBP	31.81	■■■□□ 2.68
NBPF3-208	ENST00000475869	FZD9	O00144	591 aa		31.8	■■■□□ 2.68
NBPF3-208	ENST00000475869	BBOX1	O75936	387 aa		31.8	■■■□□ 2.68
NBPF3-208	ENST00000475869	TWISTNB	Q3B726	338 aa	Predicted RBP	31.8	■■■□□ 2.68
NBPF3-208	ENST00000475869	DDX46	Q7L014	1031 aa	Known RBP	31.8	■■■□□ 2.68
NBPF3-208	ENST00000475869	WDR63	Q8IWG1	891 aa		31.79	■■■□□ 2.68
NBPF3-208	ENST00000475869	FAM9B	Q8IZU0	186 aa		31.79	■■■□□ 2.68
NBPF3-208	ENST00000475869	L3MBTL3	Q96JM7	780 aa	Predicted RBP	31.79	■■■□□ 2.68
NBPF3-208	ENST00000475869	MYD88	Q99836	296 aa		31.79	■■■□□ 2.68
NBPF3-208	ENST00000475869	FANCI	Q9NVI1	1328 aa		31.78	■■■□□ 2.68
NBPF3-208	ENST00000475869	LRRC37A	A6NMS7	1700 aa		31.78	■■■□□ 2.68
NBPF3-208	ENST00000475869	GRAP	Q13588	217 aa		31.78	■■■□□ 2.68
NBPF3-208	ENST00000475869	GRAPL	Q8TC17	118 aa	Predicted RBP	31.78	■■■□□ 2.68
NBPF3-208	ENST00000475869	DDX58	O95786	925 aa	Known RBP	31.77	■■■□□ 2.68
NBPF3-208	ENST00000475869	RTL5	Q5HYW3	569 aa	Predicted RBP	31.77	■■■□□ 2.68
NBPF3-208	ENST00000475869	SP8	Q8IXZ3	490 aa		31.77	■■■□□ 2.68
NBPF3-208	ENST00000475869	JDP2	Q8WYK2	163 aa		31.77	■■■□□ 2.68
NBPF3-208	ENST00000475869	TMX4	Q9H1E5	349 aa	Predicted RBP	31.77	■■■□□ 2.68
NBPF3-208	ENST00000475869	SF3B3	Q15393	1217 aa	Known RBP	31.76	■■■□□ 2.67
NBPF3-208	ENST00000475869	METTL22	Q9BUU2	404 aa	Predicted RBP	31.76	■■■□□ 2.67
NBPF3-208	ENST00000475869	STK31	Q9BXU1	1019 aa		31.76	■■■□□ 2.67
NBPF3-208	ENST00000475869	IRS4	O14654	1257 aa	Predicted RBP	31.75	■■■□□ 2.67
NBPF3-208	ENST00000475869	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	31.75	■■■□□ 2.67
NBPF3-208	ENST00000475869	CCDC191	Q8NCU4	936 aa		31.75	■■■□□ 2.67
NBPF3-208	ENST00000475869	CACNA1F	O60840	1977 aa		31.75	■■■□□ 2.67
NBPF3-208	ENST00000475869	COL4A1	P02462	1669 aa		31.74	■■■□□ 2.67
NBPF3-208	ENST00000475869	MAP3K2	Q9Y2U5	619 aa		31.74	■■■□□ 2.67

Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms