RNA–Protein interactions for RNA: ENST00000475296.5

PLS1-206, Transcript of plastin 1, humanhuman

TSL 3

Gene PLS1, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLS1-206ENST00000475296 TMEM88BA6NKF7 163 aa17.01■□□□□ 0.31
PLS1-206ENST00000475296 EPHX2P34913 555 aa17.01■□□□□ 0.31
PLS1-206ENST00000475296 PNMA8AQ86V59 439 aaPredicted RBP17.01■□□□□ 0.31
PLS1-206ENST00000475296 RPGRQ92834 1020 aaKnown RBP17.01■□□□□ 0.31
PLS1-206ENST00000475296 PASKQ96RG2 1323 aa17■□□□□ 0.31
PLS1-206ENST00000475296 ARFGEF2Q9Y6D5 1785 aa17■□□□□ 0.31
PLS1-206ENST00000475296 PNNQ9H307 717 aaKnown RBP17■□□□□ 0.31
PLS1-206ENST00000475296 MAP3K15Q6ZN16 1313 aa16.99■□□□□ 0.31
PLS1-206ENST00000475296 FZD9O00144 591 aa16.99■□□□□ 0.31
PLS1-206ENST00000475296 ITGBL1O95965 494 aaPredicted RBP16.99■□□□□ 0.31
PLS1-206ENST00000475296 GPTP24298 496 aa16.99■□□□□ 0.31
PLS1-206ENST00000475296 EIF6P56537 245 aaKnown RBP16.99■□□□□ 0.31
PLS1-206ENST00000475296 EIF4A1P60842 406 aaKnown RBP16.99■□□□□ 0.31
PLS1-206ENST00000475296 CC2D2BQ6DHV5 1058 aa16.99■□□□□ 0.31
PLS1-206ENST00000475296 TTLL7Q6ZT98 887 aa16.99■□□□□ 0.31
PLS1-206ENST00000475296 GPC2Q8N158 579 aa16.99■□□□□ 0.31
PLS1-206ENST00000475296 PSMD1Q99460 953 aa16.99■□□□□ 0.31
PLS1-206ENST00000475296 ZBTB3Q9H5J0 574 aa16.99■□□□□ 0.31
PLS1-206ENST00000475296 GJA3Q9Y6H8 435 aa16.99■□□□□ 0.31
PLS1-206ENST00000475296 RNF123Q5XPI4 1314 aa16.98■□□□□ 0.31
PLS1-206ENST00000475296 SCN4AP35499 1836 aa16.98■□□□□ 0.31
PLS1-206ENST00000475296 DLG5Q8TDM6 1919 aa16.98■□□□□ 0.31
PLS1-206ENST00000475296 TCERG1O14776 1098 aaKnown RBP16.98■□□□□ 0.31
PLS1-206ENST00000475296 CNTROBQ8N137 903 aa16.98■□□□□ 0.31
PLS1-206ENST00000475296 AIDAQ96BJ3 306 aa16.98■□□□□ 0.31
PLS1-206ENST00000475296 RBM17Q96I25 401 aaKnown RBP16.98■□□□□ 0.31
PLS1-206ENST00000475296 TMX4Q9H1E5 349 aaPredicted RBP16.98■□□□□ 0.31
PLS1-206ENST00000475296 CNTNAP1P78357 1384 aa16.98■□□□□ 0.31
PLS1-206ENST00000475296 NFE2L2Q16236 605 aa16.97■□□□□ 0.31
PLS1-206ENST00000475296 CRY2Q49AN0 593 aa16.97■□□□□ 0.31
PLS1-206ENST00000475296 GRIPAP1Q4V328 841 aa16.97■□□□□ 0.31
PLS1-206ENST00000475296 MAP1SQ66K74 1059 aaPredicted RBP16.97■□□□□ 0.31
PLS1-206ENST00000475296 THUMPD2Q9BTF0 503 aaKnown RBP16.97■□□□□ 0.31
PLS1-206ENST00000475296 MAPK8IP3Q9UPT6 1336 aa16.96■□□□□ 0.31
PLS1-206ENST00000475296 LMOD1P29536 600 aaPredicted RBP16.96■□□□□ 0.31
PLS1-206ENST00000475296 VEGFBP49765 207 aa16.96■□□□□ 0.31
PLS1-206ENST00000475296 SUSD4Q5VX71 490 aa16.96■□□□□ 0.31
PLS1-206ENST00000475296 PPP1R42Q7Z4L9 355 aa16.96■□□□□ 0.31
PLS1-206ENST00000475296 LARGE2Q8N3Y3 721 aa16.96■□□□□ 0.31
PLS1-206ENST00000475296 ABCC12Q96J65 1359 aa16.95■□□□□ 0.3
PLS1-206ENST00000475296 FOXN1O15353 648 aa16.95■□□□□ 0.3
PLS1-206ENST00000475296 HOXA10P31260 410 aaPredicted RBP16.95■□□□□ 0.3
PLS1-206ENST00000475296 DEFB115Q30KQ5 88 aa16.95■□□□□ 0.3
PLS1-206ENST00000475296 PLEKHF1Q96S99 279 aa16.95■□□□□ 0.3
PLS1-206ENST00000475296 SPDYE2BA6NHP3 402 aa16.94■□□□□ 0.3
PLS1-206ENST00000475296 SPDYE6P0CI01 402 aa16.94■□□□□ 0.3
PLS1-206ENST00000475296 EIF2S2P20042 333 aaKnown RBP16.94■□□□□ 0.3
PLS1-206ENST00000475296 SPDYE2Q495Y8 402 aa16.94■□□□□ 0.3
PLS1-206ENST00000475296 GIGYF2Q6Y7W6 1299 aaKnown RBP16.94■□□□□ 0.3
PLS1-206ENST00000475296 ZNF34Q8IZ26 560 aa16.94■□□□□ 0.3
PLS1-206ENST00000475296 NLRP3Q96P20 1036 aa16.94■□□□□ 0.3
PLS1-206ENST00000475296 CRAMP1Q96RY5 1269 aa16.94■□□□□ 0.3
PLS1-206ENST00000475296 TSPYL4Q9UJ04 414 aa16.94■□□□□ 0.3
PLS1-206ENST00000475296 ABT1Q9ULW3 272 aaKnown RBP16.94■□□□□ 0.3
PLS1-206ENST00000475296 LAMB4A4D0S4 1761 aa16.94■□□□□ 0.3
PLS1-206ENST00000475296 PPEF1O14829 653 aaPredicted RBP16.93■□□□□ 0.3
PLS1-206ENST00000475296 CTCFP49711 727 aaPredicted RBP16.93■□□□□ 0.3
PLS1-206ENST00000475296 UBN2Q6ZU65 1347 aa16.93■□□□□ 0.3
PLS1-206ENST00000475296 NUP98P52948 1817 aa16.92■□□□□ 0.3
PLS1-206ENST00000475296 PARP10Q53GL7 1025 aa16.92■□□□□ 0.3
PLS1-206ENST00000475296 NIM1KQ8IY84 436 aa16.92■□□□□ 0.3
PLS1-206ENST00000475296 PRDM10Q9NQV6 1147 aa16.92■□□□□ 0.3
PLS1-206ENST00000475296 ERBB4Q15303 1308 aa16.92■□□□□ 0.3
PLS1-206ENST00000475296 NTSR2O95665 410 aa16.91■□□□□ 0.3
PLS1-206ENST00000475296 EPS15P42566 896 aa16.91■□□□□ 0.3
PLS1-206ENST00000475296 RIPK4P57078 832 aa16.91■□□□□ 0.3
PLS1-206ENST00000475296 UTP14AQ9BVJ6 771 aaKnown RBP16.91■□□□□ 0.3
PLS1-206ENST00000475296 KDM3BQ7LBC6 1761 aa16.91■□□□□ 0.3
PLS1-206ENST00000475296 IBTKQ9P2D0 1353 aaPredicted RBP16.9■□□□□ 0.3
PLS1-206ENST00000475296 PPIP5K2O43314 1243 aa16.9■□□□□ 0.3
PLS1-206ENST00000475296 PAXIP1Q6ZW49 1069 aaPredicted RBP16.9■□□□□ 0.3
PLS1-206ENST00000475296 DDX21Q9NR30 783 aaKnown RBP eCLIP16.9■□□□□ 0.3
PLS1-206ENST00000475296 WBP1LQ9NX94 342 aa16.9■□□□□ 0.3
PLS1-206ENST00000475296 RASSF10A6NK89 507 aa16.89■□□□□ 0.29
PLS1-206ENST00000475296 MAP2K1Q02750 393 aaPredicted RBP16.89■□□□□ 0.29
PLS1-206ENST00000475296 WDR33Q9C0J8 1336 aaKnown RBP16.89■□□□□ 0.29
PLS1-206ENST00000475296 SCNN1DP51172 638 aa16.88■□□□□ 0.29
PLS1-206ENST00000475296 LBX1P52954 281 aa16.88■□□□□ 0.29
PLS1-206ENST00000475296 AIMP1Q12904 312 aaKnown RBP16.88■□□□□ 0.29
PLS1-206ENST00000475296 AOC3Q16853 763 aa16.88■□□□□ 0.29
PLS1-206ENST00000475296 C3orf67Q6ZVT6 689 aa16.88■□□□□ 0.29
PLS1-206ENST00000475296 USP50Q70EL3 339 aaPredicted RBP16.88■□□□□ 0.29
PLS1-206ENST00000475296 SUPT20HQ8NEM7 779 aa16.88■□□□□ 0.29
PLS1-206ENST00000475296 NECTIN2Q92692 538 aa16.88■□□□□ 0.29
PLS1-206ENST00000475296 VPS33BQ9H267 617 aa16.88■□□□□ 0.29
PLS1-206ENST00000475296 ATP6V0A2Q9Y487 856 aa16.88■□□□□ 0.29
PLS1-206ENST00000475296 ANXA1P04083 346 aa16.87■□□□□ 0.29
PLS1-206ENST00000475296 GRM1Q13255 1194 aa16.87■□□□□ 0.29
PLS1-206ENST00000475296 PDIA6Q15084 440 aa16.87■□□□□ 0.29
PLS1-206ENST00000475296 SLC10A5Q5PT55 438 aa16.87■□□□□ 0.29
PLS1-206ENST00000475296 RIC1Q4ADV7 1423 aa16.87■□□□□ 0.29
PLS1-206ENST00000475296 SNED1Q8TER0 1413 aa16.87■□□□□ 0.29
PLS1-206ENST00000475296 BBOX1O75936 387 aa16.86■□□□□ 0.29
PLS1-206ENST00000475296 LMOD3Q0VAK6 560 aa16.86■□□□□ 0.29
PLS1-206ENST00000475296 HSP90AB3PQ58FF7 597 aa16.86■□□□□ 0.29
PLS1-206ENST00000475296 COPS6Q7L5N1 327 aa16.86■□□□□ 0.29
PLS1-206ENST00000475296 SLC51AQ86UW1 340 aa16.86■□□□□ 0.29
PLS1-206ENST00000475296 BEGAINQ9BUH8 593 aa16.86■□□□□ 0.29
PLS1-206ENST00000475296 BABAM1Q9NWV8 329 aa16.86■□□□□ 0.29
PLS1-206ENST00000475296 ZNRF3Q9ULT6 936 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms