RNA–Protein interactions for RNA: ENST00000474962.1

CLIP2-204, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 3

Gene CLIP2, Length 690 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-204ENST00000474962 ERBB4Q15303 1308 aa15.42■□□□□ 0.06
CLIP2-204ENST00000474962 ABCC12Q96J65 1359 aa15.41■□□□□ 0.06
CLIP2-204ENST00000474962 DDNO94850 711 aaPredicted RBP15.41■□□□□ 0.06
CLIP2-204ENST00000474962 CRY2Q49AN0 593 aa15.41■□□□□ 0.06
CLIP2-204ENST00000474962 C3orf67Q6ZVT6 689 aa15.41■□□□□ 0.06
CLIP2-204ENST00000474962 ZNF277Q9NRM2 450 aaPredicted RBP15.41■□□□□ 0.06
CLIP2-204ENST00000474962 CCDC93Q567U6 631 aa15.4■□□□□ 0.06
CLIP2-204ENST00000474962 XAGE3Q8WTP9 111 aa15.4■□□□□ 0.06
CLIP2-204ENST00000474962 FER1L6Q2WGJ9 1857 aa15.4■□□□□ 0.06
CLIP2-204ENST00000474962 NUP98P52948 1817 aa15.39■□□□□ 0.05
CLIP2-204ENST00000474962 APAF1O14727 1248 aa15.39■□□□□ 0.05
CLIP2-204ENST00000474962 NTSR2O95665 410 aa15.39■□□□□ 0.05
CLIP2-204ENST00000474962 HOXA10P31260 410 aaPredicted RBP15.39■□□□□ 0.05
CLIP2-204ENST00000474962 FKBP4Q02790 459 aaKnown RBP eCLIP15.39■□□□□ 0.05
CLIP2-204ENST00000474962 SLC51AQ86UW1 340 aa15.39■□□□□ 0.05
CLIP2-204ENST00000474962 RTKN2Q8IZC4 609 aa15.39■□□□□ 0.05
CLIP2-204ENST00000474962 SYNE4Q8N205 404 aa15.39■□□□□ 0.05
CLIP2-204ENST00000474962 SMC1BQ8NDV3 1235 aa15.39■□□□□ 0.05
CLIP2-204ENST00000474962 ZNF428Q96B54 188 aa15.39■□□□□ 0.05
CLIP2-204ENST00000474962 LAMB4A4D0S4 1761 aa15.39■□□□□ 0.05
CLIP2-204ENST00000474962 TCERG1O14776 1098 aaKnown RBP15.38■□□□□ 0.05
CLIP2-204ENST00000474962 PPP1R42Q7Z4L9 355 aa15.38■□□□□ 0.05
CLIP2-204ENST00000474962 RPGRQ92834 1020 aaKnown RBP15.38■□□□□ 0.05
CLIP2-204ENST00000474962 UTP14AQ9BVJ6 771 aaKnown RBP15.38■□□□□ 0.05
CLIP2-204ENST00000474962 DDX21Q9NR30 783 aaKnown RBP eCLIP15.38■□□□□ 0.05
CLIP2-204ENST00000474962 PARP10Q53GL7 1025 aa15.37■□□□□ 0.05
CLIP2-204ENST00000474962 SLC10A5Q5PT55 438 aa15.37■□□□□ 0.05
CLIP2-204ENST00000474962 CFAP44Q96MT7 982 aa15.37■□□□□ 0.05
CLIP2-204ENST00000474962 CHPF2Q9P2E5 772 aa15.37■□□□□ 0.05
CLIP2-204ENST00000474962 CACNA1SQ13698 1873 aa15.36■□□□□ 0.05
CLIP2-204ENST00000474962 TCIRG1Q13488 830 aa15.36■□□□□ 0.05
CLIP2-204ENST00000474962 RBM17Q96I25 401 aaKnown RBP15.36■□□□□ 0.05
CLIP2-204ENST00000474962 NLRP3Q96P20 1036 aa15.36■□□□□ 0.05
CLIP2-204ENST00000474962 MBIPQ9NS73 344 aa15.36■□□□□ 0.05
CLIP2-204ENST00000474962 FOXD4L1Q9NU39 408 aa15.36■□□□□ 0.05
CLIP2-204ENST00000474962 ZNF853P0CG23 659 aa15.35■□□□□ 0.05
CLIP2-204ENST00000474962 POTEIP0CG38 1075 aa15.35■□□□□ 0.05
CLIP2-204ENST00000474962 POTEJP0CG39 1038 aa15.35■□□□□ 0.05
CLIP2-204ENST00000474962 HCLS1P14317 486 aaPredicted RBP15.35■□□□□ 0.05
CLIP2-204ENST00000474962 HDGFL1Q5TGJ6 251 aa15.35■□□□□ 0.05
CLIP2-204ENST00000474962 DUSP27Q5VZP5 1158 aa15.35■□□□□ 0.05
CLIP2-204ENST00000474962 NLRP10Q86W26 655 aa15.35■□□□□ 0.05
CLIP2-204ENST00000474962 CRAMP1Q96RY5 1269 aa15.35■□□□□ 0.05
CLIP2-204ENST00000474962 IARSP41252 1262 aaKnown RBP15.34■□□□□ 0.05
CLIP2-204ENST00000474962 SALL2Q9Y467 1007 aaPredicted RBP15.34■□□□□ 0.05
CLIP2-204ENST00000474962 ZNF541Q9H0D2 1346 aa15.34■□□□□ 0.05
CLIP2-204ENST00000474962 IBTKQ9P2D0 1353 aaPredicted RBP15.34■□□□□ 0.05
CLIP2-204ENST00000474962 DICER1Q9UPY3 1922 aaKnown RBP15.33■□□□□ 0.05
CLIP2-204ENST00000474962 TNRC6CQ9HCJ0 1690 aaKnown RBP15.33■□□□□ 0.04
CLIP2-204ENST00000474962 ELL2O00472 640 aaPredicted RBP15.33■□□□□ 0.04
CLIP2-204ENST00000474962 HSP90AB3PQ58FF7 597 aa15.33■□□□□ 0.04
CLIP2-204ENST00000474962 ANKRD13DQ6ZTN6 518 aa15.33■□□□□ 0.04
CLIP2-204ENST00000474962 PSMD1Q99460 953 aa15.33■□□□□ 0.04
CLIP2-204ENST00000474962 DBF4Q9UBU7 674 aaPredicted RBP15.33■□□□□ 0.04
CLIP2-204ENST00000474962 TRMT112Q9UI30 125 aaKnown RBP15.33■□□□□ 0.04
CLIP2-204ENST00000474962 TIAM2Q8IVF5 1701 aa15.33■□□□□ 0.04
CLIP2-204ENST00000474962 FZD9O00144 591 aa15.32■□□□□ 0.04
CLIP2-204ENST00000474962 PPEF1O14829 653 aaPredicted RBP15.32■□□□□ 0.04
CLIP2-204ENST00000474962 CALD1Q05682 793 aaKnown RBP15.32■□□□□ 0.04
CLIP2-204ENST00000474962 CC2D2BQ6DHV5 1058 aa15.32■□□□□ 0.04
CLIP2-204ENST00000474962 KLRG1Q96E93 195 aa15.32■□□□□ 0.04
CLIP2-204ENST00000474962 ATP5J2-PTCD1G3V325 749 aa15.31■□□□□ 0.04
CLIP2-204ENST00000474962 HOXB7P09629 217 aa15.31■□□□□ 0.04
CLIP2-204ENST00000474962 CHADLQ6NUI6 762 aa15.31■□□□□ 0.04
CLIP2-204ENST00000474962 C8orf58Q8NAV2 365 aa15.31■□□□□ 0.04
CLIP2-204ENST00000474962 PLBD2Q8NHP8 589 aa15.31■□□□□ 0.04
CLIP2-204ENST00000474962 L3MBTL3Q96JM7 780 aaPredicted RBP15.31■□□□□ 0.04
CLIP2-204ENST00000474962 TAF1DQ9H5J8 278 aaPredicted RBP15.31■□□□□ 0.04
CLIP2-204ENST00000474962 WDR90Q96KV7 1748 aa15.31■□□□□ 0.04
CLIP2-204ENST00000474962 ARFGEF2Q9Y6D5 1785 aa15.31■□□□□ 0.04
CLIP2-204ENST00000474962 SNED1Q8TER0 1413 aa15.3■□□□□ 0.04
CLIP2-204ENST00000474962 JDP2Q8WYK2 163 aa15.3■□□□□ 0.04
CLIP2-204ENST00000474962 IFT57Q9NWB7 429 aa15.3■□□□□ 0.04
CLIP2-204ENST00000474962 HYPKQ9NX55 129 aa15.3■□□□□ 0.04
CLIP2-204ENST00000474962 ATP6V0A2Q9Y487 856 aa15.3■□□□□ 0.04
CLIP2-204ENST00000474962 RIC1Q4ADV7 1423 aa15.29■□□□□ 0.04
CLIP2-204ENST00000474962 ABCC4O15439 1325 aa15.29■□□□□ 0.04
CLIP2-204ENST00000474962 SH3TC1Q8TE82 1336 aa15.29■□□□□ 0.04
CLIP2-204ENST00000474962 IQCA1LA6NCM1 817 aa15.29■□□□□ 0.04
CLIP2-204ENST00000474962 BBOX1O75936 387 aa15.29■□□□□ 0.04
CLIP2-204ENST00000474962 GNAI1P63096 354 aa15.29■□□□□ 0.04
CLIP2-204ENST00000474962 CCDC27Q2M243 656 aa15.29■□□□□ 0.04
CLIP2-204ENST00000474962 RTL5Q5HYW3 569 aaPredicted RBP15.29■□□□□ 0.04
CLIP2-204ENST00000474962 FAM89AQ96GI7 184 aa15.29■□□□□ 0.04
CLIP2-204ENST00000474962 ISCA1Q9BUE6 129 aa15.29■□□□□ 0.04
CLIP2-204ENST00000474962 PHAXQ9H814 394 aaKnown RBP15.29■□□□□ 0.04
CLIP2-204ENST00000474962 GRIPAP1Q4V328 841 aa15.28■□□□□ 0.04
CLIP2-204ENST00000474962 EAPPQ56P03 285 aaPredicted RBP15.28■□□□□ 0.04
CLIP2-204ENST00000474962 LARGE2Q8N3Y3 721 aa15.28■□□□□ 0.04
CLIP2-204ENST00000474962 GJA3Q9Y6H8 435 aa15.28■□□□□ 0.04
CLIP2-204ENST00000474962 RNF123Q5XPI4 1314 aa15.27■□□□□ 0.04
CLIP2-204ENST00000474962 DDX46Q7L014 1031 aaKnown RBP15.27■□□□□ 0.04
CLIP2-204ENST00000474962 SP8Q8IXZ3 490 aa15.27■□□□□ 0.04
CLIP2-204ENST00000474962 GPC2Q8N158 579 aa15.27■□□□□ 0.04
CLIP2-204ENST00000474962 JMYQ8N9B5 988 aa15.27■□□□□ 0.04
CLIP2-204ENST00000474962 TMX4Q9H1E5 349 aaPredicted RBP15.27■□□□□ 0.04
CLIP2-204ENST00000474962 HACL1Q9UJ83 578 aa15.27■□□□□ 0.04
CLIP2-204ENST00000474962 CLEC11AQ9Y240 323 aa15.27■□□□□ 0.04
CLIP2-204ENST00000474962 EPHX2P34913 555 aa15.26■□□□□ 0.03
CLIP2-204ENST00000474962 EIF6P56537 245 aaKnown RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms