RNA–Protein interactions for RNA: ENST00000474880.5

ARPC1B-216, Transcript of actin related protein 2/3 complex subunit 1B, humanhuman

TSL 5

Gene ARPC1B, Length 709 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC1B-216ENST00000474880 XAGE3Q8WTP9 111 aa14.3□□□□□ -0.12
ARPC1B-216ENST00000474880 TSR2Q969E8 191 aaKnown RBP14.3□□□□□ -0.12
ARPC1B-216ENST00000474880 KDM2BQ8NHM5 1336 aa14.3□□□□□ -0.12
ARPC1B-216ENST00000474880 ZC3H4Q9UPT8 1303 aaKnown RBP14.3□□□□□ -0.12
ARPC1B-216ENST00000474880 NTSR2O95665 410 aa14.29□□□□□ -0.12
ARPC1B-216ENST00000474880 CRY2Q49AN0 593 aa14.29□□□□□ -0.12
ARPC1B-216ENST00000474880 OLFM4Q6UX06 510 aa14.29□□□□□ -0.12
ARPC1B-216ENST00000474880 C8orf58Q8NAV2 365 aa14.29□□□□□ -0.12
ARPC1B-216ENST00000474880 HYPKQ9NX55 129 aa14.29□□□□□ -0.12
ARPC1B-216ENST00000474880 LTBP3Q9NS15 1303 aa14.29□□□□□ -0.12
ARPC1B-216ENST00000474880 RIC1Q4ADV7 1423 aa14.29□□□□□ -0.12
ARPC1B-216ENST00000474880 CEP350Q5VT06 3117 aa14.28□□□□□ -0.12
ARPC1B-216ENST00000474880 TOMM70O94826 608 aa14.28□□□□□ -0.12
ARPC1B-216ENST00000474880 TAF1P21675 1872 aa14.28□□□□□ -0.12
ARPC1B-216ENST00000474880 HSP90AB3PQ58FF7 597 aa14.28□□□□□ -0.12
ARPC1B-216ENST00000474880 SOGA3Q5TF21 947 aa14.28□□□□□ -0.12
ARPC1B-216ENST00000474880 TAOK3Q9H2K8 898 aa14.28□□□□□ -0.12
ARPC1B-216ENST00000474880 RRAGCQ9HB90 399 aa14.28□□□□□ -0.12
ARPC1B-216ENST00000474880 FANCIQ9NVI1 1328 aa14.27□□□□□ -0.12
ARPC1B-216ENST00000474880 GLTPD2A6NH11 291 aa14.27□□□□□ -0.13
ARPC1B-216ENST00000474880 HSPA6P17066 643 aa14.27□□□□□ -0.13
ARPC1B-216ENST00000474880 PARP10Q53GL7 1025 aa14.27□□□□□ -0.13
ARPC1B-216ENST00000474880 CCDC30Q5VVM6 783 aa14.27□□□□□ -0.13
ARPC1B-216ENST00000474880 C3orf67Q6ZVT6 689 aa14.27□□□□□ -0.13
ARPC1B-216ENST00000474880 PPP1R42Q7Z4L9 355 aa14.27□□□□□ -0.13
ARPC1B-216ENST00000474880 MYH16Q9H6N6 1097 aa14.27□□□□□ -0.13
ARPC1B-216ENST00000474880 ALDH1B1P30837 517 aa14.26□□□□□ -0.13
ARPC1B-216ENST00000474880 HOXA10P31260 410 aaPredicted RBP14.26□□□□□ -0.13
ARPC1B-216ENST00000474880 GOLGA2Q08379 1002 aa14.26□□□□□ -0.13
ARPC1B-216ENST00000474880 TCIRG1Q13488 830 aa14.26□□□□□ -0.13
ARPC1B-216ENST00000474880 TWISTNBQ3B726 338 aaPredicted RBP14.26□□□□□ -0.13
ARPC1B-216ENST00000474880 CCDC93Q567U6 631 aa14.26□□□□□ -0.13
ARPC1B-216ENST00000474880 UTP14AQ9BVJ6 771 aaKnown RBP14.26□□□□□ -0.13
ARPC1B-216ENST00000474880 STK31Q9BXU1 1019 aa14.26□□□□□ -0.13
ARPC1B-216ENST00000474880 WDR90Q96KV7 1748 aa14.26□□□□□ -0.13
ARPC1B-216ENST00000474880 ANKRD13DQ6ZTN6 518 aa14.25□□□□□ -0.13
ARPC1B-216ENST00000474880 NLRP10Q86W26 655 aa14.25□□□□□ -0.13
ARPC1B-216ENST00000474880 TSPYL6Q8N831 410 aa14.25□□□□□ -0.13
ARPC1B-216ENST00000474880 PLBD2Q8NHP8 589 aa14.25□□□□□ -0.13
ARPC1B-216ENST00000474880 RPGRQ92834 1020 aaKnown RBP14.25□□□□□ -0.13
ARPC1B-216ENST00000474880 SNED1Q8TER0 1413 aa14.24□□□□□ -0.13
ARPC1B-216ENST00000474880 DDX60Q8IY21 1712 aaKnown RBP14.24□□□□□ -0.13
ARPC1B-216ENST00000474880 SLC10A5Q5PT55 438 aa14.24□□□□□ -0.13
ARPC1B-216ENST00000474880 SYNE4Q8N205 404 aa14.24□□□□□ -0.13
ARPC1B-216ENST00000474880 RBM46Q8TBY0 533 aaKnown RBP14.24□□□□□ -0.13
ARPC1B-216ENST00000474880 DDX58O95786 925 aaKnown RBP14.23□□□□□ -0.13
ARPC1B-216ENST00000474880 FKBP4Q02790 459 aaKnown RBP eCLIP14.23□□□□□ -0.13
ARPC1B-216ENST00000474880 SLC51AQ86UW1 340 aa14.23□□□□□ -0.13
ARPC1B-216ENST00000474880 C16orf71Q8IYS4 520 aaPredicted RBP14.23□□□□□ -0.13
ARPC1B-216ENST00000474880 RTKN2Q8IZC4 609 aa14.23□□□□□ -0.13
ARPC1B-216ENST00000474880 ZNF428Q96B54 188 aa14.23□□□□□ -0.13
ARPC1B-216ENST00000474880 CRAMP1Q96RY5 1269 aa14.23□□□□□ -0.13
ARPC1B-216ENST00000474880 ZNF277Q9NRM2 450 aaPredicted RBP14.23□□□□□ -0.13
ARPC1B-216ENST00000474880 RNF123Q5XPI4 1314 aa14.22□□□□□ -0.13
ARPC1B-216ENST00000474880 ZNF521Q96K83 1311 aa14.22□□□□□ -0.13
ARPC1B-216ENST00000474880 CACNA1FO60840 1977 aa14.22□□□□□ -0.13
ARPC1B-216ENST00000474880 POTECB2RU33 542 aa14.22□□□□□ -0.13
ARPC1B-216ENST00000474880 HCLS1P14317 486 aaPredicted RBP14.22□□□□□ -0.13
ARPC1B-216ENST00000474880 VEGFAP15692 232 aaPredicted RBP14.22□□□□□ -0.13
ARPC1B-216ENST00000474880 EXOSC9Q06265 439 aaKnown RBP14.22□□□□□ -0.13
ARPC1B-216ENST00000474880 DPY19L2Q6NUT2 758 aa14.22□□□□□ -0.13
ARPC1B-216ENST00000474880 RIC3Q7Z5B4 369 aa14.22□□□□□ -0.13
ARPC1B-216ENST00000474880 MIER1Q8N108 512 aa14.22□□□□□ -0.13
ARPC1B-216ENST00000474880 RBM17Q96I25 401 aaKnown RBP14.22□□□□□ -0.13
ARPC1B-216ENST00000474880 NLRP3Q96P20 1036 aa14.22□□□□□ -0.13
ARPC1B-216ENST00000474880 PHAXQ9H814 394 aaKnown RBP14.22□□□□□ -0.13
ARPC1B-216ENST00000474880 ISCA1Q9BUE6 129 aa14.21□□□□□ -0.13
ARPC1B-216ENST00000474880 SPINK5Q9NQ38 1064 aaPredicted RBP14.21□□□□□ -0.13
ARPC1B-216ENST00000474880 TRMT112Q9UI30 125 aaKnown RBP14.21□□□□□ -0.13
ARPC1B-216ENST00000474880 SCN4AP35499 1836 aa14.2□□□□□ -0.14
ARPC1B-216ENST00000474880 SH3TC1Q8TE82 1336 aa14.2□□□□□ -0.14
ARPC1B-216ENST00000474880 E9PSI1 815 aa14.2□□□□□ -0.14
ARPC1B-216ENST00000474880 ATP5J2-PTCD1G3V325 749 aa14.2□□□□□ -0.14
ARPC1B-216ENST00000474880 DDNO94850 711 aaPredicted RBP14.2□□□□□ -0.14
ARPC1B-216ENST00000474880 TCERG1O14776 1098 aaKnown RBP14.19□□□□□ -0.14
ARPC1B-216ENST00000474880 PPEF1O14829 653 aaPredicted RBP14.19□□□□□ -0.14
ARPC1B-216ENST00000474880 IARSP41252 1262 aaKnown RBP14.19□□□□□ -0.14
ARPC1B-216ENST00000474880 FSTL1Q12841 308 aa14.19□□□□□ -0.14
ARPC1B-216ENST00000474880 CC2D2BQ6DHV5 1058 aa14.19□□□□□ -0.14
ARPC1B-216ENST00000474880 PSMD1Q99460 953 aa14.19□□□□□ -0.14
ARPC1B-216ENST00000474880 COL4A5P29400 1685 aa14.19□□□□□ -0.14
ARPC1B-216ENST00000474880 ABCC4O15439 1325 aa14.18□□□□□ -0.14
ARPC1B-216ENST00000474880 VAMP4O75379 141 aa14.18□□□□□ -0.14
ARPC1B-216ENST00000474880 SLC4A2P04920 1241 aa14.18□□□□□ -0.14
ARPC1B-216ENST00000474880 FAM89AQ96GI7 184 aa14.18□□□□□ -0.14
ARPC1B-216ENST00000474880 ZNF541Q9H0D2 1346 aa14.17□□□□□ -0.14
ARPC1B-216ENST00000474880 APLP1P51693 650 aa14.17□□□□□ -0.14
ARPC1B-216ENST00000474880 TRIM28Q13263 835 aaKnown RBP14.17□□□□□ -0.14
ARPC1B-216ENST00000474880 SMC1BQ8NDV3 1235 aa14.17□□□□□ -0.14
ARPC1B-216ENST00000474880 MYD88Q99836 296 aa14.17□□□□□ -0.14
ARPC1B-216ENST00000474880 ATP6V0A2Q9Y487 856 aa14.17□□□□□ -0.14
ARPC1B-216ENST00000474880 FZD9O00144 591 aa14.16□□□□□ -0.14
ARPC1B-216ENST00000474880 NEXNQ0ZGT2 675 aa14.16□□□□□ -0.14
ARPC1B-216ENST00000474880 FLIIQ13045 1269 aa14.16□□□□□ -0.14
ARPC1B-216ENST00000474880 GRIPAP1Q4V328 841 aa14.16□□□□□ -0.14
ARPC1B-216ENST00000474880 KSR2Q6VAB6 950 aa14.16□□□□□ -0.14
ARPC1B-216ENST00000474880 MAP3K2Q9Y2U5 619 aa14.16□□□□□ -0.14
ARPC1B-216ENST00000474880 COL4A1P02462 1669 aa14.16□□□□□ -0.14
ARPC1B-216ENST00000474880 LRRC37AA6NMS7 1700 aa14.15□□□□□ -0.14
ARPC1B-216ENST00000474880 MYH3P11055 1940 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms