RNA–Protein interactions for RNA: ENST00000474644.1

COL1A1-204, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-204ENST00000474644 NUTM1Q86Y26 1132 aa20.04■□□□□ 0.8
COL1A1-204ENST00000474644 UTP14AQ9BVJ6 771 aaKnown RBP20.04■□□□□ 0.8
COL1A1-204ENST00000474644 NOB1Q9ULX3 412 aaKnown RBP20.04■□□□□ 0.8
COL1A1-204ENST00000474644 RIC1Q4ADV7 1423 aa20.03■□□□□ 0.8
COL1A1-204ENST00000474644 ANKRD31Q8N7Z5 1873 aa20.03■□□□□ 0.8
COL1A1-204ENST00000474644 CWF19L2Q2TBE0 894 aaKnown RBP20.03■□□□□ 0.8
COL1A1-204ENST00000474644 ERFEQ4G0M1 354 aa20.03■□□□□ 0.8
COL1A1-204ENST00000474644 CCDC191Q8NCU4 936 aa20.03■□□□□ 0.8
COL1A1-204ENST00000474644 TNRC6CQ9HCJ0 1690 aaKnown RBP20.03■□□□□ 0.8
COL1A1-204ENST00000474644 NEURL1BA8MQ27 555 aa20.02■□□□□ 0.8
COL1A1-204ENST00000474644 GTF2E1P29083 439 aaPredicted RBP20.02■□□□□ 0.8
COL1A1-204ENST00000474644 LINS1Q8NG48 757 aa20.02■□□□□ 0.8
COL1A1-204ENST00000474644 BRIP1Q9BX63 1249 aa20.02■□□□□ 0.8
COL1A1-204ENST00000474644 CWC25Q9NXE8 425 aaPredicted RBP20.02■□□□□ 0.8
COL1A1-204ENST00000474644 TRMT112Q9UI30 125 aaKnown RBP20.02■□□□□ 0.8
COL1A1-204ENST00000474644 CHD4Q14839 1912 aa20.02■□□□□ 0.79
COL1A1-204ENST00000474644 BEND3Q5T5X7 828 aa20.01■□□□□ 0.79
COL1A1-204ENST00000474644 SH3TC1Q8TE82 1336 aa20.01■□□□□ 0.79
COL1A1-204ENST00000474644 COL11A2P13942 1736 aaPredicted RBP20■□□□□ 0.79
COL1A1-204ENST00000474644 TGFB2P61812 414 aa20■□□□□ 0.79
COL1A1-204ENST00000474644 SLC4A10Q6U841 1118 aa20■□□□□ 0.79
COL1A1-204ENST00000474644 API5Q9BZZ5 524 aaKnown RBP20■□□□□ 0.79
COL1A1-204ENST00000474644 CHRNA5P30532 468 aa19.99■□□□□ 0.79
COL1A1-204ENST00000474644 SYNE4Q8N205 404 aa19.99■□□□□ 0.79
COL1A1-204ENST00000474644 ARHGAP45Q92619 1136 aa19.99■□□□□ 0.79
COL1A1-204ENST00000474644 FRAT1Q92837 279 aaPredicted RBP19.99■□□□□ 0.79
COL1A1-204ENST00000474644 FAM89AQ96GI7 184 aa19.99■□□□□ 0.79
COL1A1-204ENST00000474644 RCAN3Q9UKA8 241 aa19.99■□□□□ 0.79
COL1A1-204ENST00000474644 N4BP2Q86UW6 1770 aaPredicted RBP19.98■□□□□ 0.79
COL1A1-204ENST00000474644 PCCAP05165 728 aaPredicted RBP19.98■□□□□ 0.79
COL1A1-204ENST00000474644 DPEP1P16444 411 aa19.98■□□□□ 0.79
COL1A1-204ENST00000474644 PDE6BP35913 854 aa19.98■□□□□ 0.79
COL1A1-204ENST00000474644 GCKRQ14397 625 aa19.98■□□□□ 0.79
COL1A1-204ENST00000474644 ZBTB38Q8NAP3 1195 aaPredicted RBP19.98■□□□□ 0.79
COL1A1-204ENST00000474644 A0A0G2JLW4 131 aa19.97■□□□□ 0.79
COL1A1-204ENST00000474644 DCAF8L1A6NGE4 600 aa19.97■□□□□ 0.79
COL1A1-204ENST00000474644 YY1P25490 414 aa19.97■□□□□ 0.79
COL1A1-204ENST00000474644 RTL5Q5HYW3 569 aaPredicted RBP19.97■□□□□ 0.79
COL1A1-204ENST00000474644 SLC10A5Q5PT55 438 aa19.97■□□□□ 0.79
COL1A1-204ENST00000474644 SRCIN1Q9C0H9 1055 aa19.97■□□□□ 0.79
COL1A1-204ENST00000474644 LAMB2P55268 1798 aa19.97■□□□□ 0.79
COL1A1-204ENST00000474644 DLEC1Q9Y238 1755 aa19.97■□□□□ 0.79
COL1A1-204ENST00000474644 DDX60Q8IY21 1712 aaKnown RBP19.96■□□□□ 0.79
COL1A1-204ENST00000474644 UTRNP46939 3433 aa19.96■□□□□ 0.79
COL1A1-204ENST00000474644 KLRG2A4D1S0 409 aaPredicted RBP19.96■□□□□ 0.79
COL1A1-204ENST00000474644 IPO8O15397 1037 aaKnown RBP19.96■□□□□ 0.79
COL1A1-204ENST00000474644 ALDH1L1O75891 902 aa19.96■□□□□ 0.79
COL1A1-204ENST00000474644 HCLS1P14317 486 aaPredicted RBP19.96■□□□□ 0.79
COL1A1-204ENST00000474644 TRIM27P14373 513 aa19.96■□□□□ 0.79
COL1A1-204ENST00000474644 ATF7IPQ6VMQ6 1270 aa19.96■□□□□ 0.79
COL1A1-204ENST00000474644 C3orf67Q6ZVT6 689 aa19.96■□□□□ 0.79
COL1A1-204ENST00000474644 C2CD5Q86YS7 1000 aa19.96■□□□□ 0.79
COL1A1-204ENST00000474644 ABCC4O15439 1325 aa19.96■□□□□ 0.79
COL1A1-204ENST00000474644 KCNA3P22001 575 aa19.95■□□□□ 0.78
COL1A1-204ENST00000474644 ZKSCAN2Q63HK3 967 aa19.95■□□□□ 0.78
COL1A1-204ENST00000474644 JARID2Q92833 1246 aaPredicted RBP19.95■□□□□ 0.78
COL1A1-204ENST00000474644 PDZRN3Q9UPQ7 1066 aa19.95■□□□□ 0.78
COL1A1-204ENST00000474644 TNNQ9UQP3 1299 aa19.95■□□□□ 0.78
COL1A1-204ENST00000474644 CDHR2Q9BYE9 1310 aa19.95■□□□□ 0.78
COL1A1-204ENST00000474644 H0YIN7 160 aa19.94■□□□□ 0.78
COL1A1-204ENST00000474644 IRS4O14654 1257 aaPredicted RBP19.94■□□□□ 0.78
COL1A1-204ENST00000474644 CRY2Q49AN0 593 aa19.94■□□□□ 0.78
COL1A1-204ENST00000474644 UBE3BQ7Z3V4 1068 aa19.94■□□□□ 0.78
COL1A1-204ENST00000474644 H7C1W4 665 aa19.93■□□□□ 0.78
COL1A1-204ENST00000474644 SRGNP10124 158 aa19.93■□□□□ 0.78
COL1A1-204ENST00000474644 WWC3Q9ULE0 1092 aa19.93■□□□□ 0.78
COL1A1-204ENST00000474644 BRCA1P38398 1863 aaKnown RBP19.92■□□□□ 0.78
COL1A1-204ENST00000474644 CCT4P50991 539 aaKnown RBP19.92■□□□□ 0.78
COL1A1-204ENST00000474644 CASP7P55210 303 aa19.92■□□□□ 0.78
COL1A1-204ENST00000474644 NLRP3Q96P20 1036 aa19.92■□□□□ 0.78
COL1A1-204ENST00000474644 GRM8O00222 908 aa19.91■□□□□ 0.78
COL1A1-204ENST00000474644 STYK1Q6J9G0 422 aa19.91■□□□□ 0.78
COL1A1-204ENST00000474644 CLUAP1Q96AJ1 413 aa19.91■□□□□ 0.78
COL1A1-204ENST00000474644 MASTLQ96GX5 879 aa19.91■□□□□ 0.78
COL1A1-204ENST00000474644 PIM2Q9P1W9 311 aa19.91■□□□□ 0.78
COL1A1-204ENST00000474644 HSP90B1P14625 803 aaKnown RBP19.9■□□□□ 0.78
COL1A1-204ENST00000474644 NPR1P16066 1061 aa19.9■□□□□ 0.78
COL1A1-204ENST00000474644 C9orf78Q9NZ63 289 aaPredicted RBP19.9■□□□□ 0.78
COL1A1-204ENST00000474644 UTYO14607 1347 aa19.89■□□□□ 0.77
COL1A1-204ENST00000474644 INTS3Q68E01 1043 aaKnown RBP19.89■□□□□ 0.77
COL1A1-204ENST00000474644 RPGRQ92834 1020 aaKnown RBP19.89■□□□□ 0.77
COL1A1-204ENST00000474644 ZNF622Q969S3 477 aaKnown RBP eCLIP19.89■□□□□ 0.77
COL1A1-204ENST00000474644 PDE8AO60658 829 aa19.88■□□□□ 0.77
COL1A1-204ENST00000474644 FTSJ3Q8IY81 847 aaKnown RBP19.88■□□□□ 0.77
COL1A1-204ENST00000474644 PELP1Q8IZL8 1130 aaKnown RBP19.88■□□□□ 0.77
COL1A1-204ENST00000474644 NBPF7P0C2Y1 421 aaPredicted RBP19.87■□□□□ 0.77
COL1A1-204ENST00000474644 YBX3P16989 372 aaKnown RBP eCLIP19.87■□□□□ 0.77
COL1A1-204ENST00000474644 HOXA10P31260 410 aaPredicted RBP19.87■□□□□ 0.77
COL1A1-204ENST00000474644 CTSWP56202 376 aa19.87■□□□□ 0.77
COL1A1-204ENST00000474644 SF3B3Q15393 1217 aaKnown RBP19.87■□□□□ 0.77
COL1A1-204ENST00000474644 DALRD3Q5D0E6 543 aaKnown RBP19.87■□□□□ 0.77
COL1A1-204ENST00000474644 DZIP1LQ8IYY4 767 aaKnown RBP19.87■□□□□ 0.77
COL1A1-204ENST00000474644 TMEM57Q8N5G2 664 aa19.87■□□□□ 0.77
COL1A1-204ENST00000474644 TTLL6Q8N841 843 aa19.87■□□□□ 0.77
COL1A1-204ENST00000474644 PLA2G12BQ9BX93 195 aa19.87■□□□□ 0.77
COL1A1-204ENST00000474644 USP44Q9H0E7 712 aa19.87■□□□□ 0.77
COL1A1-204ENST00000474644 BCS1LQ9Y276 419 aa19.87■□□□□ 0.77
COL1A1-204ENST00000474644 PLIN1O60240 522 aa19.86■□□□□ 0.77
COL1A1-204ENST00000474644 RLBP1P12271 317 aa19.86■□□□□ 0.77
COL1A1-204ENST00000474644 CNKSR1Q969H4 720 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms