RNA–Protein interactions for RNA: ENST00000474586.5

TRA2A-204, Transcript of transformer 2 alpha homolog, humanhuman

TSL 3

Gene TRA2A, Length 868 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-204ENST00000474586 XAGE3Q8WTP9 111 aa27.67■■■□□ 2.02
TRA2A-204ENST00000474586 RPGRQ92834 1020 aaKnown RBP27.67■■■□□ 2.02
TRA2A-204ENST00000474586 PARP10Q53GL7 1025 aa27.66■■■□□ 2.02
TRA2A-204ENST00000474586 RIC1Q4ADV7 1423 aa27.66■■■□□ 2.02
TRA2A-204ENST00000474586 C3orf67Q6ZVT6 689 aa27.65■■■□□ 2.02
TRA2A-204ENST00000474586 DDX21Q9NR30 783 aaKnown RBP eCLIP27.65■■■□□ 2.02
TRA2A-204ENST00000474586 HOXA10P31260 410 aaPredicted RBP27.64■■■□□ 2.02
TRA2A-204ENST00000474586 SYNE4Q8N205 404 aa27.64■■■□□ 2.02
TRA2A-204ENST00000474586 UTP14AQ9BVJ6 771 aaKnown RBP27.64■■■□□ 2.02
TRA2A-204ENST00000474586 RBM17Q96I25 401 aaKnown RBP27.62■■■□□ 2.01
TRA2A-204ENST00000474586 CFAP44Q96MT7 982 aa27.62■■■□□ 2.01
TRA2A-204ENST00000474586 CHPF2Q9P2E5 772 aa27.62■■■□□ 2.01
TRA2A-204ENST00000474586 APAF1O14727 1248 aa27.61■■■□□ 2.01
TRA2A-204ENST00000474586 IARSP41252 1262 aaKnown RBP27.6■■■□□ 2.01
TRA2A-204ENST00000474586 HSP90AB3PQ58FF7 597 aa27.6■■■□□ 2.01
TRA2A-204ENST00000474586 SLC10A5Q5PT55 438 aa27.6■■■□□ 2.01
TRA2A-204ENST00000474586 HDGFL1Q5TGJ6 251 aa27.6■■■□□ 2.01
TRA2A-204ENST00000474586 NLRP3Q96P20 1036 aa27.6■■■□□ 2.01
TRA2A-204ENST00000474586 CRAMP1Q96RY5 1269 aa27.6■■■□□ 2.01
TRA2A-204ENST00000474586 SNED1Q8TER0 1413 aa27.59■■■□□ 2.01
TRA2A-204ENST00000474586 TCERG1O14776 1098 aaKnown RBP27.59■■■□□ 2.01
TRA2A-204ENST00000474586 TCIRG1Q13488 830 aa27.59■■■□□ 2.01
TRA2A-204ENST00000474586 SLC51AQ86UW1 340 aa27.59■■■□□ 2.01
TRA2A-204ENST00000474586 NLRP10Q86W26 655 aa27.59■■■□□ 2.01
TRA2A-204ENST00000474586 MBIPQ9NS73 344 aa27.59■■■□□ 2.01
TRA2A-204ENST00000474586 ZNF541Q9H0D2 1346 aa27.59■■■□□ 2.01
TRA2A-204ENST00000474586 HOXB7P09629 217 aa27.58■■■□□ 2.01
TRA2A-204ENST00000474586 CC2D2BQ6DHV5 1058 aa27.58■■■□□ 2.01
TRA2A-204ENST00000474586 PSMD1Q99460 953 aa27.58■■■□□ 2.01
TRA2A-204ENST00000474586 DUSP27Q5VZP5 1158 aa27.57■■■□□ 2
TRA2A-204ENST00000474586 ANKRD36CQ5JPF3 1778 aa27.57■■■□□ 2
TRA2A-204ENST00000474586 PPEF1O14829 653 aaPredicted RBP27.56■■■□□ 2
TRA2A-204ENST00000474586 ZNF853P0CG23 659 aa27.56■■■□□ 2
TRA2A-204ENST00000474586 KLRG1Q96E93 195 aa27.56■■■□□ 2
TRA2A-204ENST00000474586 POTEIP0CG38 1075 aa27.55■■■□□ 2
TRA2A-204ENST00000474586 POTEJP0CG39 1038 aa27.55■■■□□ 2
TRA2A-204ENST00000474586 HCLS1P14317 486 aaPredicted RBP27.55■■■□□ 2
TRA2A-204ENST00000474586 ZNF428Q96B54 188 aa27.55■■■□□ 2
TRA2A-204ENST00000474586 L3MBTL3Q96JM7 780 aaPredicted RBP27.55■■■□□ 2
TRA2A-204ENST00000474586 DBF4Q9UBU7 674 aaPredicted RBP27.55■■■□□ 2
TRA2A-204ENST00000474586 FZD9O00144 591 aa27.54■■■□□ 2
TRA2A-204ENST00000474586 RNF123Q5XPI4 1314 aa27.54■■■□□ 2
TRA2A-204ENST00000474586 TRMT112Q9UI30 125 aaKnown RBP27.54■■■□□ 2
TRA2A-204ENST00000474586 IQCA1LA6NCM1 817 aa27.53■■■□□ 2
TRA2A-204ENST00000474586 CCDC184Q52MB2 194 aa27.53■■■□□ 2
TRA2A-204ENST00000474586 CHADLQ6NUI6 762 aa27.53■■■□□ 2
TRA2A-204ENST00000474586 PLBD2Q8NHP8 589 aa27.53■■■□□ 2
TRA2A-204ENST00000474586 GRIPAP1Q4V328 841 aa27.52■■■□□ 2
TRA2A-204ENST00000474586 ANKRD13DQ6ZTN6 518 aa27.52■■■□□ 2
TRA2A-204ENST00000474586 JDP2Q8WYK2 163 aa27.52■■■□□ 2
TRA2A-204ENST00000474586 TAF1DQ9H5J8 278 aaPredicted RBP27.52■■■□□ 2
TRA2A-204ENST00000474586 IFT57Q9NWB7 429 aa27.52■■■□□ 2
TRA2A-204ENST00000474586 ABCC4O15439 1325 aa27.51■■□□□ 1.99
TRA2A-204ENST00000474586 SH3TC1Q8TE82 1336 aa27.51■■□□□ 1.99
TRA2A-204ENST00000474586 GNAI1P63096 354 aa27.51■■□□□ 1.99
TRA2A-204ENST00000474586 HYPKQ9NX55 129 aa27.51■■□□□ 1.99
TRA2A-204ENST00000474586 SCN4AP35499 1836 aa27.51■■□□□ 1.99
TRA2A-204ENST00000474586 COL4A5P29400 1685 aa27.5■■□□□ 1.99
TRA2A-204ENST00000474586 CALD1Q05682 793 aaKnown RBP27.5■■□□□ 1.99
TRA2A-204ENST00000474586 ATP6V0A2Q9Y487 856 aa27.5■■□□□ 1.99
TRA2A-204ENST00000474586 LAMB2P55268 1798 aa27.5■■□□□ 1.99
TRA2A-204ENST00000474586 ELL2O00472 640 aaPredicted RBP27.49■■□□□ 1.99
TRA2A-204ENST00000474586 ATP5J2-PTCD1G3V325 749 aa27.48■■□□□ 1.99
TRA2A-204ENST00000474586 LARGE2Q8N3Y3 721 aa27.48■■□□□ 1.99
TRA2A-204ENST00000474586 ISCA1Q9BUE6 129 aa27.48■■□□□ 1.99
TRA2A-204ENST00000474586 TMX4Q9H1E5 349 aaPredicted RBP27.48■■□□□ 1.99
TRA2A-204ENST00000474586 HACL1Q9UJ83 578 aa27.48■■□□□ 1.99
TRA2A-204ENST00000474586 LDHDQ86WU2 507 aa27.47■■□□□ 1.99
TRA2A-204ENST00000474586 GPC2Q8N158 579 aa27.47■■□□□ 1.99
TRA2A-204ENST00000474586 JMYQ8N9B5 988 aa27.47■■□□□ 1.99
TRA2A-204ENST00000474586 BBOX1O75936 387 aa27.46■■□□□ 1.99
TRA2A-204ENST00000474586 ZEB1P37275 1124 aaPredicted RBP27.46■■□□□ 1.99
TRA2A-204ENST00000474586 EIF6P56537 245 aaKnown RBP27.46■■□□□ 1.99
TRA2A-204ENST00000474586 EAPPQ56P03 285 aaPredicted RBP27.46■■□□□ 1.99
TRA2A-204ENST00000474586 DDX46Q7L014 1031 aaKnown RBP27.46■■□□□ 1.99
TRA2A-204ENST00000474586 GJA3Q9Y6H8 435 aa27.46■■□□□ 1.99
TRA2A-204ENST00000474586 EPHX2P34913 555 aa27.45■■□□□ 1.98
TRA2A-204ENST00000474586 C8orf58Q8NAV2 365 aa27.45■■□□□ 1.98
TRA2A-204ENST00000474586 SP8Q8IXZ3 490 aa27.44■■□□□ 1.98
TRA2A-204ENST00000474586 FAM89AQ96GI7 184 aa27.44■■□□□ 1.98
TRA2A-204ENST00000474586 PHAXQ9H814 394 aaKnown RBP27.44■■□□□ 1.98
TRA2A-204ENST00000474586 PPIP5K2O43314 1243 aa27.43■■□□□ 1.98
TRA2A-204ENST00000474586 GRAPQ13588 217 aa27.42■■□□□ 1.98
TRA2A-204ENST00000474586 AOC3Q16853 763 aa27.42■■□□□ 1.98
TRA2A-204ENST00000474586 RIC3Q7Z5B4 369 aa27.42■■□□□ 1.98
TRA2A-204ENST00000474586 NIM1KQ8IY84 436 aa27.42■■□□□ 1.98
TRA2A-204ENST00000474586 GRAPLQ8TC17 118 aaPredicted RBP27.42■■□□□ 1.98
TRA2A-204ENST00000474586 CLEC11AQ9Y240 323 aa27.42■■□□□ 1.98
TRA2A-204ENST00000474586 TAF1P21675 1872 aa27.41■■□□□ 1.98
TRA2A-204ENST00000474586 RTL5Q5HYW3 569 aaPredicted RBP27.41■■□□□ 1.98
TRA2A-204ENST00000474586 DDX60Q8IY21 1712 aaKnown RBP27.41■■□□□ 1.98
TRA2A-204ENST00000474586 GOLGA2Q08379 1002 aa27.4■■□□□ 1.98
TRA2A-204ENST00000474586 TRIM28Q13263 835 aaKnown RBP27.4■■□□□ 1.98
TRA2A-204ENST00000474586 IFFO2Q5TF58 517 aa27.4■■□□□ 1.98
TRA2A-204ENST00000474586 DPP8Q6V1X1 898 aaPredicted RBP27.4■■□□□ 1.98
TRA2A-204ENST00000474586 PNMA8AQ86V59 439 aaPredicted RBP27.4■■□□□ 1.98
TRA2A-204ENST00000474586 MPNDQ8N594 471 aa27.4■■□□□ 1.98
TRA2A-204ENST00000474586 SUPT20HQ8NEM7 779 aa27.4■■□□□ 1.98
TRA2A-204ENST00000474586 RTFDC1Q9BY42 306 aaPredicted RBP27.4■■□□□ 1.98
TRA2A-204ENST00000474586 VPS33BQ9H267 617 aa27.39■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms