RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 NECTIN2Q92692 538 aa21.97■■□□□ 1.11
ECHDC1-214ENST00000474289 AKAP12Q02952 1782 aa21.97■■□□□ 1.11
ECHDC1-214ENST00000474289 SLU7O95391 586 aaKnown RBP21.97■■□□□ 1.11
ECHDC1-214ENST00000474289 PPP1R42Q7Z4L9 355 aa21.97■■□□□ 1.11
ECHDC1-214ENST00000474289 TRMT1Q9NXH9 659 aaKnown RBP21.97■■□□□ 1.11
ECHDC1-214ENST00000474289 FAM208AQ9UK61 1670 aaKnown RBP21.96■■□□□ 1.11
ECHDC1-214ENST00000474289 NRXN3Q9Y4C0 1643 aa21.96■■□□□ 1.11
ECHDC1-214ENST00000474289 TTC21BQ7Z4L5 1316 aa21.96■■□□□ 1.11
ECHDC1-214ENST00000474289 CAPN2P17655 700 aa21.96■■□□□ 1.11
ECHDC1-214ENST00000474289 PDCP20941 246 aa21.96■■□□□ 1.11
ECHDC1-214ENST00000474289 IQCB1Q15051 598 aa21.96■■□□□ 1.11
ECHDC1-214ENST00000474289 MRFAP1L1Q96HT8 127 aa21.96■■□□□ 1.11
ECHDC1-214ENST00000474289 PPP6R1Q9UPN7 881 aa21.96■■□□□ 1.11
ECHDC1-214ENST00000474289 ITSN1Q15811 1721 aa21.96■■□□□ 1.11
ECHDC1-214ENST00000474289 PDIA4P13667 645 aaKnown RBP21.96■■□□□ 1.11
ECHDC1-214ENST00000474289 CCZ1BP86790 482 aa21.96■■□□□ 1.11
ECHDC1-214ENST00000474289 CCZ1P86791 482 aaPredicted RBP21.96■■□□□ 1.11
ECHDC1-214ENST00000474289 CREBRFQ8IUR6 639 aa21.96■■□□□ 1.11
ECHDC1-214ENST00000474289 KCNB2Q92953 911 aa21.96■■□□□ 1.11
ECHDC1-214ENST00000474289 PGBD1Q96JS3 809 aa21.96■■□□□ 1.11
ECHDC1-214ENST00000474289 BICD2Q8TD16 824 aa21.95■■□□□ 1.1
ECHDC1-214ENST00000474289 GOLGA6L19H0YKK7 550 aa21.95■■□□□ 1.1
ECHDC1-214ENST00000474289 NPHP1O15259 732 aa21.95■■□□□ 1.1
ECHDC1-214ENST00000474289 CAVIN2O95810 425 aa21.95■■□□□ 1.1
ECHDC1-214ENST00000474289 CCAR2Q8N163 923 aaKnown RBP21.95■■□□□ 1.1
ECHDC1-214ENST00000474289 DNAJC2Q99543 621 aaKnown RBP21.95■■□□□ 1.1
ECHDC1-214ENST00000474289 NOL10Q9BSC4 688 aaKnown RBP21.95■■□□□ 1.1
ECHDC1-214ENST00000474289 USP16Q9Y5T5 823 aa21.95■■□□□ 1.1
ECHDC1-214ENST00000474289 CHD2O14647 1828 aaKnown RBP21.94■■□□□ 1.1
ECHDC1-214ENST00000474289 N4BP2Q86UW6 1770 aaPredicted RBP21.94■■□□□ 1.1
ECHDC1-214ENST00000474289 PEAK1Q9H792 1746 aa21.94■■□□□ 1.1
ECHDC1-214ENST00000474289 CCDC69A6NI79 296 aa21.94■■□□□ 1.1
ECHDC1-214ENST00000474289 COL9A3Q14050 684 aaPredicted RBP21.94■■□□□ 1.1
ECHDC1-214ENST00000474289 POLA2Q14181 598 aa21.94■■□□□ 1.1
ECHDC1-214ENST00000474289 CCDC30Q5VVM6 783 aa21.94■■□□□ 1.1
ECHDC1-214ENST00000474289 ADGRL3Q9HAR2 1447 aa21.94■■□□□ 1.1
ECHDC1-214ENST00000474289 NUTM2FA1L443 756 aa21.94■■□□□ 1.1
ECHDC1-214ENST00000474289 CYP2C19P33261 490 aa21.94■■□□□ 1.1
ECHDC1-214ENST00000474289 MTHFSDQ2M296 383 aaKnown RBP21.94■■□□□ 1.1
ECHDC1-214ENST00000474289 RIMS1Q86UR5 1692 aaKnown RBP21.93■■□□□ 1.1
ECHDC1-214ENST00000474289 NECTIN1Q15223 517 aa21.93■■□□□ 1.1
ECHDC1-214ENST00000474289 C11orf57Q6ZUT1 292 aaPredicted RBP21.93■■□□□ 1.1
ECHDC1-214ENST00000474289 RUFY2Q8WXA3 655 aa21.93■■□□□ 1.1
ECHDC1-214ENST00000474289 RGPD1P0DJD0 1748 aa21.93■■□□□ 1.1
ECHDC1-214ENST00000474289 H2AFXP16104 143 aaPredicted RBP21.92■■□□□ 1.1
ECHDC1-214ENST00000474289 LARP1Q6PKG0 1096 aaKnown RBP21.92■■□□□ 1.1
ECHDC1-214ENST00000474289 FILIP1Q7Z7B0 1213 aa21.92■■□□□ 1.1
ECHDC1-214ENST00000474289 MAP3K5Q99683 1374 aa21.92■■□□□ 1.1
ECHDC1-214ENST00000474289 MAP3K19Q56UN5 1328 aa21.92■■□□□ 1.1
ECHDC1-214ENST00000474289 ZKSCAN1P17029 563 aaPredicted RBP21.91■■□□□ 1.1
ECHDC1-214ENST00000474289 BMS1Q14692 1282 aaKnown RBP21.91■■□□□ 1.1
ECHDC1-214ENST00000474289 GTF3C6Q969F1 213 aa21.91■■□□□ 1.1
ECHDC1-214ENST00000474289 FHOD1Q9Y613 1164 aa21.91■■□□□ 1.1
ECHDC1-214ENST00000474289 PXDNLA1KZ92 1463 aa21.91■■□□□ 1.1
ECHDC1-214ENST00000474289 SRGAP3O43295 1099 aa21.91■■□□□ 1.1
ECHDC1-214ENST00000474289 MAPK8IP2Q13387 824 aaPredicted RBP21.91■■□□□ 1.1
ECHDC1-214ENST00000474289 RNF20Q5VTR2 975 aa21.91■■□□□ 1.1
ECHDC1-214ENST00000474289 ERCC6LQ2NKX8 1250 aa21.9■■□□□ 1.1
ECHDC1-214ENST00000474289 GLRX3O76003 335 aaKnown RBP21.9■■□□□ 1.1
ECHDC1-214ENST00000474289 KCND1Q9NSA2 647 aa21.9■■□□□ 1.1
ECHDC1-214ENST00000474289 USP42Q9H9J4 1324 aaKnown RBP21.9■■□□□ 1.1
ECHDC1-214ENST00000474289 CACNA1FO60840 1977 aa21.9■■□□□ 1.1
ECHDC1-214ENST00000474289 HNRNPH2P55795 449 aaKnown RBP21.89■■□□□ 1.1
ECHDC1-214ENST00000474289 CREB3L3Q68CJ9 461 aa21.89■■□□□ 1.1
ECHDC1-214ENST00000474289 RBM8AQ9Y5S9 174 aaKnown RBP21.89■■□□□ 1.1
ECHDC1-214ENST00000474289 OVOS2A0A0J9YW53 1432 aa21.89■■□□□ 1.09
ECHDC1-214ENST00000474289 OVOS2Q6IE36 1432 aa21.89■■□□□ 1.09
ECHDC1-214ENST00000474289 TCEANC2Q96MN5 208 aa21.89■■□□□ 1.09
ECHDC1-214ENST00000474289 L2HGDHQ9H9P8 463 aa21.89■■□□□ 1.09
ECHDC1-214ENST00000474289 ACEP12821 1306 aa21.89■■□□□ 1.09
ECHDC1-214ENST00000474289 KIF2AO00139 706 aaPredicted RBP21.88■■□□□ 1.09
ECHDC1-214ENST00000474289 MLECQ14165 292 aa21.88■■□□□ 1.09
ECHDC1-214ENST00000474289 OSCARQ8IYS5 282 aa21.88■■□□□ 1.09
ECHDC1-214ENST00000474289 LRRN4CLQ8ND94 238 aa21.88■■□□□ 1.09
ECHDC1-214ENST00000474289 TTC41PQ6P2S7 1318 aa21.88■■□□□ 1.09
ECHDC1-214ENST00000474289 CLCN6P51797 869 aa21.88■■□□□ 1.09
ECHDC1-214ENST00000474289 ADCY9O60503 1353 aa21.88■■□□□ 1.09
ECHDC1-214ENST00000474289 PLCD3Q8N3E9 789 aa21.87■■□□□ 1.09
ECHDC1-214ENST00000474289 TRERF1Q96PN7 1200 aa21.87■■□□□ 1.09
ECHDC1-214ENST00000474289 STX1AQ16623 288 aa21.87■■□□□ 1.09
ECHDC1-214ENST00000474289 SPATA31D1Q6ZQQ2 1576 aa21.86■■□□□ 1.09
ECHDC1-214ENST00000474289 PNMA6AP0CW24 399 aaPredicted RBP21.86■■□□□ 1.09
ECHDC1-214ENST00000474289 ZKSCAN7Q9P0L1 754 aaPredicted RBP21.86■■□□□ 1.09
ECHDC1-214ENST00000474289 BECN2A8MW95 431 aa21.86■■□□□ 1.09
ECHDC1-214ENST00000474289 SNW1Q13573 536 aaKnown RBP21.86■■□□□ 1.09
ECHDC1-214ENST00000474289 HTATSF1O43719 755 aaKnown RBP21.85■■□□□ 1.09
ECHDC1-214ENST00000474289 PLA2G4AP47712 749 aa21.85■■□□□ 1.09
ECHDC1-214ENST00000474289 DHX40Q8IX18 779 aaKnown RBP21.85■■□□□ 1.09
ECHDC1-214ENST00000474289 PSMA5P28066 241 aa21.85■■□□□ 1.09
ECHDC1-214ENST00000474289 A0A087WWV3 80 aa21.84■■□□□ 1.09
ECHDC1-214ENST00000474289 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.84■■□□□ 1.09
ECHDC1-214ENST00000474289 SLC27A2O14975 620 aa21.84■■□□□ 1.09
ECHDC1-214ENST00000474289 GIGYF1O75420 1035 aaPredicted RBP21.84■■□□□ 1.09
ECHDC1-214ENST00000474289 NBPF7P0C2Y1 421 aaPredicted RBP21.84■■□□□ 1.09
ECHDC1-214ENST00000474289 STK3Q13188 491 aa21.84■■□□□ 1.09
ECHDC1-214ENST00000474289 CCDC93Q567U6 631 aa21.84■■□□□ 1.09
ECHDC1-214ENST00000474289 E4F1Q66K89 784 aaPredicted RBP21.84■■□□□ 1.09
ECHDC1-214ENST00000474289 TOB2Q14106 344 aaPredicted RBP21.84■■□□□ 1.09
ECHDC1-214ENST00000474289 MAP4K1Q92918 833 aa21.84■■□□□ 1.09
ECHDC1-214ENST00000474289 ROBO2Q9HCK4 1378 aa21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms