RNA–Protein interactions for RNA: ENST00000474190.1

CASC3-204, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-204ENST00000474190 GCKRQ14397 625 aa13.19□□□□□ -0.3
CASC3-204ENST00000474190 PRR5LQ6MZQ0 368 aa13.19□□□□□ -0.3
CASC3-204ENST00000474190 C3orf67Q6ZVT6 689 aa13.19□□□□□ -0.3
CASC3-204ENST00000474190 TMEM57Q8N5G2 664 aa13.19□□□□□ -0.3
CASC3-204ENST00000474190 CLUAP1Q96AJ1 413 aa13.19□□□□□ -0.3
CASC3-204ENST00000474190 KAZALD1Q96I82 304 aa13.19□□□□□ -0.3
CASC3-204ENST00000474190 FHDC1Q9C0D6 1143 aaPredicted RBP13.19□□□□□ -0.3
CASC3-204ENST00000474190 USP44Q9H0E7 712 aa13.19□□□□□ -0.3
CASC3-204ENST00000474190 ARFGEF2Q9Y6D5 1785 aa13.18□□□□□ -0.3
CASC3-204ENST00000474190 PARP10Q53GL7 1025 aa13.18□□□□□ -0.3
CASC3-204ENST00000474190 HSP90AB3PQ58FF7 597 aa13.18□□□□□ -0.3
CASC3-204ENST00000474190 CCDC24Q8N4L8 307 aa13.18□□□□□ -0.3
CASC3-204ENST00000474190 CCDC191Q8NCU4 936 aa13.18□□□□□ -0.3
CASC3-204ENST00000474190 JARID2Q92833 1246 aaPredicted RBP13.18□□□□□ -0.3
CASC3-204ENST00000474190 ZNF652Q9Y2D9 606 aa13.18□□□□□ -0.3
CASC3-204ENST00000474190 GOLGB1Q14789 3259 aaKnown RBP13.17□□□□□ -0.3
CASC3-204ENST00000474190 NRXN2Q9P2S2 1712 aa13.17□□□□□ -0.3
CASC3-204ENST00000474190 C10orf71Q711Q0 1435 aa13.17□□□□□ -0.3
CASC3-204ENST00000474190 KLRG2A4D1S0 409 aaPredicted RBP13.17□□□□□ -0.3
CASC3-204ENST00000474190 IPO8O15397 1037 aaKnown RBP13.17□□□□□ -0.3
CASC3-204ENST00000474190 ALDH1L1O75891 902 aa13.17□□□□□ -0.3
CASC3-204ENST00000474190 NUTM1Q86Y26 1132 aa13.17□□□□□ -0.3
CASC3-204ENST00000474190 DZIP1LQ8IYY4 767 aaKnown RBP13.17□□□□□ -0.3
CASC3-204ENST00000474190 SETDB2Q96T68 719 aa13.17□□□□□ -0.3
CASC3-204ENST00000474190 SYT17Q9BSW7 474 aa13.17□□□□□ -0.3
CASC3-204ENST00000474190 SUPT16HQ9Y5B9 1047 aaKnown RBP13.17□□□□□ -0.3
CASC3-204ENST00000474190 PCCAP05165 728 aaPredicted RBP13.16□□□□□ -0.3
CASC3-204ENST00000474190 NBPF7P0C2Y1 421 aaPredicted RBP13.16□□□□□ -0.3
CASC3-204ENST00000474190 ERFEQ4G0M1 354 aa13.16□□□□□ -0.3
CASC3-204ENST00000474190 EPHA10Q5JZY3 1008 aa13.16□□□□□ -0.3
CASC3-204ENST00000474190 SLC10A5Q5PT55 438 aa13.16□□□□□ -0.3
CASC3-204ENST00000474190 SLC4A10Q6U841 1118 aa13.16□□□□□ -0.3
CASC3-204ENST00000474190 NPM2Q86SE8 214 aaKnown RBP13.16□□□□□ -0.3
CASC3-204ENST00000474190 FAM89AQ96GI7 184 aa13.16□□□□□ -0.3
CASC3-204ENST00000474190 SRCIN1Q9C0H9 1055 aa13.16□□□□□ -0.3
CASC3-204ENST00000474190 CWC25Q9NXE8 425 aaPredicted RBP13.16□□□□□ -0.3
CASC3-204ENST00000474190 NUP98P52948 1817 aa13.16□□□□□ -0.3
CASC3-204ENST00000474190 CACNA1FO60840 1977 aa13.15□□□□□ -0.3
CASC3-204ENST00000474190 ZBTB7BO15156 539 aaPredicted RBP13.15□□□□□ -0.3
CASC3-204ENST00000474190 PDE3AQ14432 1141 aa13.15□□□□□ -0.3
CASC3-204ENST00000474190 ZBTB38Q8NAP3 1195 aaPredicted RBP13.15□□□□□ -0.3
CASC3-204ENST00000474190 MEIS3Q99687 375 aa13.15□□□□□ -0.3
CASC3-204ENST00000474190 UTP14AQ9BVJ6 771 aaKnown RBP13.15□□□□□ -0.3
CASC3-204ENST00000474190 FAM177BA6PVY3 158 aa13.14□□□□□ -0.31
CASC3-204ENST00000474190 GRM8O00222 908 aa13.14□□□□□ -0.31
CASC3-204ENST00000474190 CCT4P50991 539 aaKnown RBP13.14□□□□□ -0.31
CASC3-204ENST00000474190 NBPF5PQ86XG9 351 aaPredicted RBP13.14□□□□□ -0.31
CASC3-204ENST00000474190 CDHR2Q9BYE9 1310 aa13.13□□□□□ -0.31
CASC3-204ENST00000474190 RIC1Q4ADV7 1423 aa13.13□□□□□ -0.31
CASC3-204ENST00000474190 COL4A1P02462 1669 aa13.13□□□□□ -0.31
CASC3-204ENST00000474190 HCLS1P14317 486 aaPredicted RBP13.13□□□□□ -0.31
CASC3-204ENST00000474190 KCNA3P22001 575 aa13.13□□□□□ -0.31
CASC3-204ENST00000474190 FOXO4P98177 505 aa13.13□□□□□ -0.31
CASC3-204ENST00000474190 CRY2Q49AN0 593 aa13.13□□□□□ -0.31
CASC3-204ENST00000474190 RTL5Q5HYW3 569 aaPredicted RBP13.13□□□□□ -0.31
CASC3-204ENST00000474190 SUCLG2Q96I99 432 aa13.13□□□□□ -0.31
CASC3-204ENST00000474190 PLA2G12BQ9BX93 195 aa13.13□□□□□ -0.31
CASC3-204ENST00000474190 TRMT112Q9UI30 125 aaKnown RBP13.13□□□□□ -0.31
CASC3-204ENST00000474190 COG6Q9Y2V7 657 aa13.13□□□□□ -0.31
CASC3-204ENST00000474190 PARP3Q9Y6F1 533 aa13.13□□□□□ -0.31
CASC3-204ENST00000474190 NEXNQ0ZGT2 675 aa13.12□□□□□ -0.31
CASC3-204ENST00000474190 MVPQ14764 893 aaKnown RBP13.12□□□□□ -0.31
CASC3-204ENST00000474190 TPTE2Q6XPS3 522 aa13.12□□□□□ -0.31
CASC3-204ENST00000474190 UBE3BQ7Z3V4 1068 aa13.12□□□□□ -0.31
CASC3-204ENST00000474190 PPP1R42Q7Z4L9 355 aa13.12□□□□□ -0.31
CASC3-204ENST00000474190 SLC51AQ86UW1 340 aa13.12□□□□□ -0.31
CASC3-204ENST00000474190 ANKRD44Q8N8A2 993 aa13.12□□□□□ -0.31
CASC3-204ENST00000474190 CNBD1Q8NA66 436 aa13.12□□□□□ -0.31
CASC3-204ENST00000474190 SH3TC1Q8TE82 1336 aa13.12□□□□□ -0.31
CASC3-204ENST00000474190 IRS4O14654 1257 aaPredicted RBP13.11□□□□□ -0.31
CASC3-204ENST00000474190 CSF1RP07333 972 aa13.11□□□□□ -0.31
CASC3-204ENST00000474190 BRIP1Q9BX63 1249 aa13.11□□□□□ -0.31
CASC3-204ENST00000474190 ANKRD36CQ5JPF3 1778 aa13.11□□□□□ -0.31
CASC3-204ENST00000474190 TNRC6CQ9HCJ0 1690 aaKnown RBP13.11□□□□□ -0.31
CASC3-204ENST00000474190 SF3B3Q15393 1217 aaKnown RBP13.1□□□□□ -0.31
CASC3-204ENST00000474190 RABL6Q3YEC7 729 aaPredicted RBP13.1□□□□□ -0.31
CASC3-204ENST00000474190 NLGN2Q8NFZ4 835 aa13.1□□□□□ -0.31
CASC3-204ENST00000474190 NYXQ9GZU5 481 aa13.1□□□□□ -0.31
CASC3-204ENST00000474190 ZBTB40Q9NUA8 1239 aa13.1□□□□□ -0.31
CASC3-204ENST00000474190 N4BP2Q86UW6 1770 aaPredicted RBP13.09□□□□□ -0.31
CASC3-204ENST00000474190 AFDNP55196 1824 aaKnown RBP13.09□□□□□ -0.31
CASC3-204ENST00000474190 POLD1P28340 1107 aa13.09□□□□□ -0.31
CASC3-204ENST00000474190 CHRNA5P30532 468 aa13.09□□□□□ -0.31
CASC3-204ENST00000474190 TTLL11Q8NHH1 800 aa13.09□□□□□ -0.31
CASC3-204ENST00000474190 CRBNQ96SW2 442 aa13.09□□□□□ -0.31
CASC3-204ENST00000474190 KIAA1551Q9HCM1 1747 aa13.09□□□□□ -0.31
CASC3-204ENST00000474190 ANKRD31Q8N7Z5 1873 aa13.08□□□□□ -0.32
CASC3-204ENST00000474190 SRGNP10124 158 aa13.08□□□□□ -0.32
CASC3-204ENST00000474190 ITPRIPQ8IWB1 547 aa13.08□□□□□ -0.32
CASC3-204ENST00000474190 SIRT2Q8IXJ6 389 aa13.08□□□□□ -0.32
CASC3-204ENST00000474190 FTSJ3Q8IY81 847 aaKnown RBP13.08□□□□□ -0.32
CASC3-204ENST00000474190 BICC1Q9H694 974 aaKnown RBP13.08□□□□□ -0.32
CASC3-204ENST00000474190 CD2APQ9Y5K6 639 aa13.08□□□□□ -0.32
CASC3-204ENST00000474190 PDE8AO60658 829 aa13.07□□□□□ -0.32
CASC3-204ENST00000474190 DPEP1P16444 411 aa13.07□□□□□ -0.32
CASC3-204ENST00000474190 HOXA10P31260 410 aaPredicted RBP13.07□□□□□ -0.32
CASC3-204ENST00000474190 RFX5P48382 616 aaPredicted RBP13.07□□□□□ -0.32
CASC3-204ENST00000474190 CTSWP56202 376 aa13.07□□□□□ -0.32
CASC3-204ENST00000474190 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.07□□□□□ -0.32
CASC3-204ENST00000474190 C9orf78Q9NZ63 289 aaPredicted RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms