RNA–Protein interactions for RNA: ENST00000474171.1

RPL13A-205, Transcript of ribosomal protein L13a, humanhuman

TSL 2

Gene RPL13A, Length 521 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13A-205ENST00000474171 CCDC93Q567U6 631 aa14.65□□□□□ -0.06
RPL13A-205ENST00000474171 C16orf71Q8IYS4 520 aaPredicted RBP14.65□□□□□ -0.06
RPL13A-205ENST00000474171 SYNE4Q8N205 404 aa14.65□□□□□ -0.06
RPL13A-205ENST00000474171 CFAP44Q96MT7 982 aa14.65□□□□□ -0.06
RPL13A-205ENST00000474171 DDX21Q9NR30 783 aaKnown RBP eCLIP14.65□□□□□ -0.06
RPL13A-205ENST00000474171 DDNO94850 711 aaPredicted RBP14.64□□□□□ -0.07
RPL13A-205ENST00000474171 ZNF853P0CG23 659 aa14.64□□□□□ -0.07
RPL13A-205ENST00000474171 SOGA3Q5TF21 947 aa14.64□□□□□ -0.07
RPL13A-205ENST00000474171 ZNF277Q9NRM2 450 aaPredicted RBP14.64□□□□□ -0.07
RPL13A-205ENST00000474171 VEGFAP15692 232 aaPredicted RBP14.63□□□□□ -0.07
RPL13A-205ENST00000474171 ALDH1B1P30837 517 aa14.63□□□□□ -0.07
RPL13A-205ENST00000474171 HOXA10P31260 410 aaPredicted RBP14.63□□□□□ -0.07
RPL13A-205ENST00000474171 FKBP4Q02790 459 aaKnown RBP eCLIP14.63□□□□□ -0.07
RPL13A-205ENST00000474171 HDGFL1Q5TGJ6 251 aa14.63□□□□□ -0.07
RPL13A-205ENST00000474171 SCN4AP35499 1836 aa14.63□□□□□ -0.07
RPL13A-205ENST00000474171 APLP1P51693 650 aa14.62□□□□□ -0.07
RPL13A-205ENST00000474171 DUSP27Q5VZP5 1158 aa14.62□□□□□ -0.07
RPL13A-205ENST00000474171 PPP1R42Q7Z4L9 355 aa14.62□□□□□ -0.07
RPL13A-205ENST00000474171 NLRP10Q86W26 655 aa14.62□□□□□ -0.07
RPL13A-205ENST00000474171 DNAJC5GQ8N7S2 189 aa14.62□□□□□ -0.07
RPL13A-205ENST00000474171 RPGRQ92834 1020 aaKnown RBP14.62□□□□□ -0.07
RPL13A-205ENST00000474171 ZNF541Q9H0D2 1346 aa14.62□□□□□ -0.07
RPL13A-205ENST00000474171 COL4A1P02462 1669 aa14.61□□□□□ -0.07
RPL13A-205ENST00000474171 TCERG1O14776 1098 aaKnown RBP14.61□□□□□ -0.07
RPL13A-205ENST00000474171 FSTL1Q12841 308 aa14.61□□□□□ -0.07
RPL13A-205ENST00000474171 TCIRG1Q13488 830 aa14.61□□□□□ -0.07
RPL13A-205ENST00000474171 PARP10Q53GL7 1025 aa14.61□□□□□ -0.07
RPL13A-205ENST00000474171 DPY19L2Q6NUT2 758 aa14.61□□□□□ -0.07
RPL13A-205ENST00000474171 UTP14AQ9BVJ6 771 aaKnown RBP14.61□□□□□ -0.07
RPL13A-205ENST00000474171 ELL2O00472 640 aaPredicted RBP14.6□□□□□ -0.07
RPL13A-205ENST00000474171 HOXB7P09629 217 aa14.6□□□□□ -0.07
RPL13A-205ENST00000474171 POTEIP0CG38 1075 aa14.6□□□□□ -0.07
RPL13A-205ENST00000474171 POTEJP0CG39 1038 aa14.6□□□□□ -0.07
RPL13A-205ENST00000474171 HCLS1P14317 486 aaPredicted RBP14.6□□□□□ -0.07
RPL13A-205ENST00000474171 SLC10A5Q5PT55 438 aa14.6□□□□□ -0.07
RPL13A-205ENST00000474171 RTKN2Q8IZC4 609 aa14.6□□□□□ -0.07
RPL13A-205ENST00000474171 ZEB1P37275 1124 aaPredicted RBP14.59□□□□□ -0.07
RPL13A-205ENST00000474171 IARSP41252 1262 aaKnown RBP14.59□□□□□ -0.07
RPL13A-205ENST00000474171 C8orf58Q8NAV2 365 aa14.59□□□□□ -0.07
RPL13A-205ENST00000474171 SMC1BQ8NDV3 1235 aa14.59□□□□□ -0.07
RPL13A-205ENST00000474171 CRAMP1Q96RY5 1269 aa14.59□□□□□ -0.07
RPL13A-205ENST00000474171 IFT57Q9NWB7 429 aa14.59□□□□□ -0.07
RPL13A-205ENST00000474171 DBF4Q9UBU7 674 aaPredicted RBP14.59□□□□□ -0.07
RPL13A-205ENST00000474171 LTBP1Q14766 1721 aa14.58□□□□□ -0.07
RPL13A-205ENST00000474171 ATP5J2-PTCD1G3V325 749 aa14.58□□□□□ -0.08
RPL13A-205ENST00000474171 PPEF1O14829 653 aaPredicted RBP14.58□□□□□ -0.08
RPL13A-205ENST00000474171 HSP90AB3PQ58FF7 597 aa14.58□□□□□ -0.08
RPL13A-205ENST00000474171 ANKRD13DQ6ZTN6 518 aa14.58□□□□□ -0.08
RPL13A-205ENST00000474171 PLBD2Q8NHP8 589 aa14.58□□□□□ -0.08
RPL13A-205ENST00000474171 RBM17Q96I25 401 aaKnown RBP14.58□□□□□ -0.08
RPL13A-205ENST00000474171 NLRP3Q96P20 1036 aa14.58□□□□□ -0.08
RPL13A-205ENST00000474171 PHAXQ9H814 394 aaKnown RBP14.58□□□□□ -0.08
RPL13A-205ENST00000474171 ABCC4O15439 1325 aa14.58□□□□□ -0.08
RPL13A-205ENST00000474171 ADAMTSL1Q8N6G6 1762 aa14.57□□□□□ -0.08
RPL13A-205ENST00000474171 ZNF316A6NFI3 1004 aaPredicted RBP14.57□□□□□ -0.08
RPL13A-205ENST00000474171 GNAI1P63096 354 aa14.57□□□□□ -0.08
RPL13A-205ENST00000474171 TSPYL6Q8N831 410 aa14.57□□□□□ -0.08
RPL13A-205ENST00000474171 PSMD1Q99460 953 aa14.57□□□□□ -0.08
RPL13A-205ENST00000474171 ISCA1Q9BUE6 129 aa14.57□□□□□ -0.08
RPL13A-205ENST00000474171 TRMT112Q9UI30 125 aaKnown RBP14.57□□□□□ -0.08
RPL13A-205ENST00000474171 LRRC37AA6NMS7 1700 aa14.57□□□□□ -0.08
RPL13A-205ENST00000474171 FZD9O00144 591 aa14.56□□□□□ -0.08
RPL13A-205ENST00000474171 TSR2Q969E8 191 aaKnown RBP14.56□□□□□ -0.08
RPL13A-205ENST00000474171 HYPKQ9NX55 129 aa14.56□□□□□ -0.08
RPL13A-205ENST00000474171 RTL5Q5HYW3 569 aaPredicted RBP14.55□□□□□ -0.08
RPL13A-205ENST00000474171 CC2D2BQ6DHV5 1058 aa14.55□□□□□ -0.08
RPL13A-205ENST00000474171 FAM89AQ96GI7 184 aa14.55□□□□□ -0.08
RPL13A-205ENST00000474171 L3MBTL3Q96JM7 780 aaPredicted RBP14.55□□□□□ -0.08
RPL13A-205ENST00000474171 RNF123Q5XPI4 1314 aa14.55□□□□□ -0.08
RPL13A-205ENST00000474171 SH3TC1Q8TE82 1336 aa14.55□□□□□ -0.08
RPL13A-205ENST00000474171 DUOX1Q9NRD9 1551 aa14.55□□□□□ -0.08
RPL13A-205ENST00000474171 TAF1DQ9H5J8 278 aaPredicted RBP14.54□□□□□ -0.08
RPL13A-205ENST00000474171 ATP6V0A2Q9Y487 856 aa14.54□□□□□ -0.08
RPL13A-205ENST00000474171 CALD1Q05682 793 aaKnown RBP14.53□□□□□ -0.08
RPL13A-205ENST00000474171 WWC1Q8IX03 1113 aa14.53□□□□□ -0.08
RPL13A-205ENST00000474171 MRS2Q9HD23 443 aa14.53□□□□□ -0.08
RPL13A-205ENST00000474171 AOC3Q16853 763 aa14.52□□□□□ -0.09
RPL13A-205ENST00000474171 CHADLQ6NUI6 762 aa14.52□□□□□ -0.09
RPL13A-205ENST00000474171 LARGE2Q8N3Y3 721 aa14.52□□□□□ -0.09
RPL13A-205ENST00000474171 KLRG1Q96E93 195 aa14.52□□□□□ -0.09
RPL13A-205ENST00000474171 MYH3P11055 1940 aa14.52□□□□□ -0.09
RPL13A-205ENST00000474171 SPEF2Q9C093 1822 aa14.52□□□□□ -0.09
RPL13A-205ENST00000474171 GRAPQ13588 217 aa14.51□□□□□ -0.09
RPL13A-205ENST00000474171 CCDC27Q2M243 656 aa14.51□□□□□ -0.09
RPL13A-205ENST00000474171 RIC3Q7Z5B4 369 aa14.51□□□□□ -0.09
RPL13A-205ENST00000474171 SP8Q8IXZ3 490 aa14.51□□□□□ -0.09
RPL13A-205ENST00000474171 GRAPLQ8TC17 118 aaPredicted RBP14.51□□□□□ -0.09
RPL13A-205ENST00000474171 JDP2Q8WYK2 163 aa14.51□□□□□ -0.09
RPL13A-205ENST00000474171 JARID2Q92833 1246 aaPredicted RBP14.51□□□□□ -0.09
RPL13A-205ENST00000474171 MYD88Q99836 296 aa14.51□□□□□ -0.09
RPL13A-205ENST00000474171 CACNA1FO60840 1977 aa14.51□□□□□ -0.09
RPL13A-205ENST00000474171 IQCA1LA6NCM1 817 aa14.5□□□□□ -0.09
RPL13A-205ENST00000474171 PPIP5K2O43314 1243 aa14.5□□□□□ -0.09
RPL13A-205ENST00000474171 ANP32CO43423 234 aa14.5□□□□□ -0.09
RPL13A-205ENST00000474171 BBOX1O75936 387 aa14.5□□□□□ -0.09
RPL13A-205ENST00000474171 TRIM28Q13263 835 aaKnown RBP14.5□□□□□ -0.09
RPL13A-205ENST00000474171 EAPPQ56P03 285 aaPredicted RBP14.5□□□□□ -0.09
RPL13A-205ENST00000474171 DDX46Q7L014 1031 aaKnown RBP14.5□□□□□ -0.09
RPL13A-205ENST00000474171 GPC2Q8N158 579 aa14.5□□□□□ -0.09
RPL13A-205ENST00000474171 CELF1Q92879 486 aaKnown RBP14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms