RNA–Protein interactions for RNA: ENST00000473911.1

CLIC3-201, Transcript of chloride intracellular channel 3, humanhuman

TSL 5

Gene CLIC3, Length 732 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3-201ENST00000473911 ABCC12Q96J65 1359 aa20.27■□□□□ 0.84
CLIC3-201ENST00000473911 ZNF316A6NFI3 1004 aaPredicted RBP20.27■□□□□ 0.84
CLIC3-201ENST00000473911 SUSD4Q5VX71 490 aa20.27■□□□□ 0.84
CLIC3-201ENST00000473911 CHADLQ6NUI6 762 aa20.27■□□□□ 0.84
CLIC3-201ENST00000473911 SLC51AQ86UW1 340 aa20.27■□□□□ 0.84
CLIC3-201ENST00000473911 ZNF34Q8IZ26 560 aa20.27■□□□□ 0.84
CLIC3-201ENST00000473911 ZNF277Q9NRM2 450 aaPredicted RBP20.27■□□□□ 0.84
CLIC3-201ENST00000473911 ZNF541Q9H0D2 1346 aa20.27■□□□□ 0.83
CLIC3-201ENST00000473911 IBTKQ9P2D0 1353 aaPredicted RBP20.26■□□□□ 0.83
CLIC3-201ENST00000473911 ALDH1B1P30837 517 aa20.26■□□□□ 0.83
CLIC3-201ENST00000473911 CALD1Q05682 793 aaKnown RBP20.26■□□□□ 0.83
CLIC3-201ENST00000473911 PARP10Q53GL7 1025 aa20.26■□□□□ 0.83
CLIC3-201ENST00000473911 CCDC93Q567U6 631 aa20.26■□□□□ 0.83
CLIC3-201ENST00000473911 HDGFL1Q5TGJ6 251 aa20.26■□□□□ 0.83
CLIC3-201ENST00000473911 COPS6Q7L5N1 327 aa20.26■□□□□ 0.83
CLIC3-201ENST00000473911 PPP1R42Q7Z4L9 355 aa20.26■□□□□ 0.83
CLIC3-201ENST00000473911 XAGE3Q8WTP9 111 aa20.26■□□□□ 0.83
CLIC3-201ENST00000473911 DDX21Q9NR30 783 aaKnown RBP eCLIP20.26■□□□□ 0.83
CLIC3-201ENST00000473911 RPGRQ92834 1020 aaKnown RBP20.25■□□□□ 0.83
CLIC3-201ENST00000473911 MKRN1Q9UHC7 482 aaKnown RBP20.25■□□□□ 0.83
CLIC3-201ENST00000473911 NTSR2O95665 410 aa20.24■□□□□ 0.83
CLIC3-201ENST00000473911 HOXB7P09629 217 aa20.24■□□□□ 0.83
CLIC3-201ENST00000473911 HSP90AB3PQ58FF7 597 aa20.24■□□□□ 0.83
CLIC3-201ENST00000473911 MBIPQ9NS73 344 aa20.24■□□□□ 0.83
CLIC3-201ENST00000473911 CHPF2Q9P2E5 772 aa20.24■□□□□ 0.83
CLIC3-201ENST00000473911 FKBP4Q02790 459 aaKnown RBP eCLIP20.23■□□□□ 0.83
CLIC3-201ENST00000473911 CRY2Q49AN0 593 aa20.23■□□□□ 0.83
CLIC3-201ENST00000473911 DUSP27Q5VZP5 1158 aa20.23■□□□□ 0.83
CLIC3-201ENST00000473911 UTP14AQ9BVJ6 771 aaKnown RBP20.23■□□□□ 0.83
CLIC3-201ENST00000473911 TAF1DQ9H5J8 278 aaPredicted RBP20.23■□□□□ 0.83
CLIC3-201ENST00000473911 IFT57Q9NWB7 429 aa20.23■□□□□ 0.83
CLIC3-201ENST00000473911 NUP98P52948 1817 aa20.23■□□□□ 0.83
CLIC3-201ENST00000473911 ANP32CO43423 234 aa20.22■□□□□ 0.83
CLIC3-201ENST00000473911 GNAI1P63096 354 aa20.22■□□□□ 0.83
CLIC3-201ENST00000473911 CCDC184Q52MB2 194 aa20.22■□□□□ 0.83
CLIC3-201ENST00000473911 L3MBTL3Q96JM7 780 aaPredicted RBP20.22■□□□□ 0.83
CLIC3-201ENST00000473911 CREBZFQ9NS37 354 aa20.22■□□□□ 0.83
CLIC3-201ENST00000473911 PASKQ96RG2 1323 aa20.22■□□□□ 0.83
CLIC3-201ENST00000473911 SNED1Q8TER0 1413 aa20.21■□□□□ 0.83
CLIC3-201ENST00000473911 SCN4AP35499 1836 aa20.21■□□□□ 0.83
CLIC3-201ENST00000473911 RTKN2Q8IZC4 609 aa20.21■□□□□ 0.83
CLIC3-201ENST00000473911 DBF4Q9UBU7 674 aaPredicted RBP20.21■□□□□ 0.83
CLIC3-201ENST00000473911 COL4A5P29400 1685 aa20.21■□□□□ 0.83
CLIC3-201ENST00000473911 RIC1Q4ADV7 1423 aa20.2■□□□□ 0.82
CLIC3-201ENST00000473911 ZNF853P0CG23 659 aa20.2■□□□□ 0.82
CLIC3-201ENST00000473911 SYNE4Q8N205 404 aa20.2■□□□□ 0.82
CLIC3-201ENST00000473911 RBM17Q96I25 401 aaKnown RBP20.2■□□□□ 0.82
CLIC3-201ENST00000473911 ITGBL1O95965 494 aaPredicted RBP20.19■□□□□ 0.82
CLIC3-201ENST00000473911 TCIRG1Q13488 830 aa20.19■□□□□ 0.82
CLIC3-201ENST00000473911 NLRP3Q96P20 1036 aa20.19■□□□□ 0.82
CLIC3-201ENST00000473911 MRS2Q9HD23 443 aa20.19■□□□□ 0.82
CLIC3-201ENST00000473911 HOXA10P31260 410 aaPredicted RBP20.18■□□□□ 0.82
CLIC3-201ENST00000473911 EAPPQ56P03 285 aaPredicted RBP20.18■□□□□ 0.82
CLIC3-201ENST00000473911 NLRP10Q86W26 655 aa20.18■□□□□ 0.82
CLIC3-201ENST00000473911 LDHDQ86WU2 507 aa20.18■□□□□ 0.82
CLIC3-201ENST00000473911 HYPKQ9NX55 129 aa20.18■□□□□ 0.82
CLIC3-201ENST00000473911 RNF123Q5XPI4 1314 aa20.18■□□□□ 0.82
CLIC3-201ENST00000473911 ADAMTSL1Q8N6G6 1762 aa20.18■□□□□ 0.82
CLIC3-201ENST00000473911 IQCA1LA6NCM1 817 aa20.17■□□□□ 0.82
CLIC3-201ENST00000473911 ELL2O00472 640 aaPredicted RBP20.17■□□□□ 0.82
CLIC3-201ENST00000473911 IARSP41252 1262 aaKnown RBP20.17■□□□□ 0.82
CLIC3-201ENST00000473911 C3orf67Q6ZVT6 689 aa20.17■□□□□ 0.82
CLIC3-201ENST00000473911 PLBD2Q8NHP8 589 aa20.17■□□□□ 0.82
CLIC3-201ENST00000473911 TRMT112Q9UI30 125 aaKnown RBP20.17■□□□□ 0.82
CLIC3-201ENST00000473911 FZD9O00144 591 aa20.16■□□□□ 0.82
CLIC3-201ENST00000473911 SLC10A5Q5PT55 438 aa20.16■□□□□ 0.82
CLIC3-201ENST00000473911 CC2D2BQ6DHV5 1058 aa20.16■□□□□ 0.82
CLIC3-201ENST00000473911 ANKRD13DQ6ZTN6 518 aa20.16■□□□□ 0.82
CLIC3-201ENST00000473911 CRAMP1Q96RY5 1269 aa20.16■□□□□ 0.82
CLIC3-201ENST00000473911 CNTNAP1P78357 1384 aa20.16■□□□□ 0.82
CLIC3-201ENST00000473911 TCERG1O14776 1098 aaKnown RBP20.15■□□□□ 0.82
CLIC3-201ENST00000473911 PPEF1O14829 653 aaPredicted RBP20.15■□□□□ 0.82
CLIC3-201ENST00000473911 TMX4Q9H1E5 349 aaPredicted RBP20.15■□□□□ 0.82
CLIC3-201ENST00000473911 HACL1Q9UJ83 578 aa20.15■□□□□ 0.82
CLIC3-201ENST00000473911 LTBP1Q14766 1721 aa20.15■□□□□ 0.82
CLIC3-201ENST00000473911 SH3TC1Q8TE82 1336 aa20.14■□□□□ 0.81
CLIC3-201ENST00000473911 FOXN1O15353 648 aa20.14■□□□□ 0.81
CLIC3-201ENST00000473911 HCLS1P14317 486 aaPredicted RBP20.14■□□□□ 0.81
CLIC3-201ENST00000473911 EPHX2P34913 555 aa20.14■□□□□ 0.81
CLIC3-201ENST00000473911 VEGFBP49765 207 aa20.14■□□□□ 0.81
CLIC3-201ENST00000473911 MAP1SQ66K74 1059 aaPredicted RBP20.14■□□□□ 0.81
CLIC3-201ENST00000473911 ZNF428Q96B54 188 aa20.14■□□□□ 0.81
CLIC3-201ENST00000473911 GOLGA2Q08379 1002 aa20.13■□□□□ 0.81
CLIC3-201ENST00000473911 C8orf58Q8NAV2 365 aa20.13■□□□□ 0.81
CLIC3-201ENST00000473911 PSMD1Q99460 953 aa20.13■□□□□ 0.81
CLIC3-201ENST00000473911 CLEC11AQ9Y240 323 aa20.13■□□□□ 0.81
CLIC3-201ENST00000473911 FMR1Q06787 632 aaKnown RBP eCLIP20.12■□□□□ 0.81
CLIC3-201ENST00000473911 GRIPAP1Q4V328 841 aa20.12■□□□□ 0.81
CLIC3-201ENST00000473911 RIC3Q7Z5B4 369 aa20.12■□□□□ 0.81
CLIC3-201ENST00000473911 CHMP4AQ9BY43 222 aa20.12■□□□□ 0.81
CLIC3-201ENST00000473911 TMEM88BA6NKF7 163 aa20.11■□□□□ 0.81
CLIC3-201ENST00000473911 ATP5J2-PTCD1G3V325 749 aa20.11■□□□□ 0.81
CLIC3-201ENST00000473911 CCDC27Q2M243 656 aa20.11■□□□□ 0.81
CLIC3-201ENST00000473911 WWC1Q8IX03 1113 aa20.11■□□□□ 0.81
CLIC3-201ENST00000473911 ABCC4O15439 1325 aa20.1■□□□□ 0.81
CLIC3-201ENST00000473911 CCDC30Q5VVM6 783 aa20.1■□□□□ 0.81
CLIC3-201ENST00000473911 DDX46Q7L014 1031 aaKnown RBP20.1■□□□□ 0.81
CLIC3-201ENST00000473911 CNTROBQ8N137 903 aa20.1■□□□□ 0.81
CLIC3-201ENST00000473911 JDP2Q8WYK2 163 aa20.1■□□□□ 0.81
CLIC3-201ENST00000473911 TSR2Q969E8 191 aaKnown RBP20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms