RNA–Protein interactions for RNA: ENST00000473602.1

SHROOM3-204, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 789 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-204ENST00000473602 HACL1Q9UJ83 578 aa16.88■□□□□ 0.29
SHROOM3-204ENST00000473602 ZNF541Q9H0D2 1346 aa16.88■□□□□ 0.29
SHROOM3-204ENST00000473602 EPHX2P34913 555 aa16.87■□□□□ 0.29
SHROOM3-204ENST00000473602 LBX1P52954 281 aa16.87■□□□□ 0.29
SHROOM3-204ENST00000473602 LAS1LQ9Y4W2 734 aaKnown RBP16.87■□□□□ 0.29
SHROOM3-204ENST00000473602 DICER1Q9UPY3 1922 aaKnown RBP16.87■□□□□ 0.29
SHROOM3-204ENST00000473602 KLRG2A4D1S0 409 aaPredicted RBP16.86■□□□□ 0.29
SHROOM3-204ENST00000473602 ERVV-1B6SEH8 477 aa16.86■□□□□ 0.29
SHROOM3-204ENST00000473602 HOXB7P09629 217 aa16.86■□□□□ 0.29
SHROOM3-204ENST00000473602 NCBP3Q53F19 620 aaKnown RBP16.86■□□□□ 0.29
SHROOM3-204ENST00000473602 TPTE2Q6XPS3 522 aa16.86■□□□□ 0.29
SHROOM3-204ENST00000473602 IFT57Q9NWB7 429 aa16.86■□□□□ 0.29
SHROOM3-204ENST00000473602 FAM177BA6PVY3 158 aa16.85■□□□□ 0.29
SHROOM3-204ENST00000473602 ZNF853P0CG23 659 aa16.85■□□□□ 0.29
SHROOM3-204ENST00000473602 GNAI1P63096 354 aa16.85■□□□□ 0.29
SHROOM3-204ENST00000473602 CCDC27Q2M243 656 aa16.85■□□□□ 0.29
SHROOM3-204ENST00000473602 DEFB115Q30KQ5 88 aa16.85■□□□□ 0.29
SHROOM3-204ENST00000473602 MAP1SQ66K74 1059 aaPredicted RBP16.85■□□□□ 0.29
SHROOM3-204ENST00000473602 KIF6Q6ZMV9 814 aa16.85■□□□□ 0.29
SHROOM3-204ENST00000473602 RTKN2Q8IZC4 609 aa16.85■□□□□ 0.29
SHROOM3-204ENST00000473602 CNTROBQ8N137 903 aa16.85■□□□□ 0.29
SHROOM3-204ENST00000473602 NIP7Q9Y221 180 aaKnown RBP eCLIP16.85■□□□□ 0.29
SHROOM3-204ENST00000473602 MYL6BP14649 208 aa16.84■□□□□ 0.29
SHROOM3-204ENST00000473602 PNMA8AQ86V59 439 aaPredicted RBP16.84■□□□□ 0.29
SHROOM3-204ENST00000473602 SYNE4Q8N205 404 aa16.84■□□□□ 0.29
SHROOM3-204ENST00000473602 RNF123Q5XPI4 1314 aa16.84■□□□□ 0.29
SHROOM3-204ENST00000473602 MAP3K15Q6ZN16 1313 aa16.84■□□□□ 0.29
SHROOM3-204ENST00000473602 FZD9O00144 591 aa16.83■□□□□ 0.28
SHROOM3-204ENST00000473602 EIF2S2P20042 333 aaKnown RBP16.83■□□□□ 0.28
SHROOM3-204ENST00000473602 IARSP41252 1262 aaKnown RBP16.83■□□□□ 0.28
SHROOM3-204ENST00000473602 MBIPQ9NS73 344 aa16.83■□□□□ 0.28
SHROOM3-204ENST00000473602 ANKRD36CQ5JPF3 1778 aa16.82■□□□□ 0.28
SHROOM3-204ENST00000473602 RASSF10A6NK89 507 aa16.82■□□□□ 0.28
SHROOM3-204ENST00000473602 ALDH1B1P30837 517 aa16.82■□□□□ 0.28
SHROOM3-204ENST00000473602 PDIA6Q15084 440 aa16.82■□□□□ 0.28
SHROOM3-204ENST00000473602 LRP10Q7Z4F1 713 aa16.82■□□□□ 0.28
SHROOM3-204ENST00000473602 NGEFQ8N5V2 710 aa16.82■□□□□ 0.28
SHROOM3-204ENST00000473602 WDR33Q9C0J8 1336 aaKnown RBP16.81■□□□□ 0.28
SHROOM3-204ENST00000473602 HSPA8P11142 646 aaKnown RBP16.81■□□□□ 0.28
SHROOM3-204ENST00000473602 GTF2E1P29083 439 aaPredicted RBP16.81■□□□□ 0.28
SHROOM3-204ENST00000473602 HLFQ16534 295 aa16.81■□□□□ 0.28
SHROOM3-204ENST00000473602 KRT24Q2M2I5 525 aa16.81■□□□□ 0.28
SHROOM3-204ENST00000473602 ABT1Q9ULW3 272 aaKnown RBP16.81■□□□□ 0.28
SHROOM3-204ENST00000473602 ARFGEF2Q9Y6D5 1785 aa16.81■□□□□ 0.28
SHROOM3-204ENST00000473602 HDGFL1Q5TGJ6 251 aa16.8■□□□□ 0.28
SHROOM3-204ENST00000473602 TTLL7Q6ZT98 887 aa16.8■□□□□ 0.28
SHROOM3-204ENST00000473602 GPC2Q8N158 579 aa16.8■□□□□ 0.28
SHROOM3-204ENST00000473602 ABHD8Q96I13 439 aa16.8■□□□□ 0.28
SHROOM3-204ENST00000473602 DDX21Q9NR30 783 aaKnown RBP eCLIP16.8■□□□□ 0.28
SHROOM3-204ENST00000473602 SCN4AP35499 1836 aa16.8■□□□□ 0.28
SHROOM3-204ENST00000473602 IBTKQ9P2D0 1353 aaPredicted RBP16.79■□□□□ 0.28
SHROOM3-204ENST00000473602 MAP2K1Q02750 393 aaPredicted RBP16.79■□□□□ 0.28
SHROOM3-204ENST00000473602 DUSP27Q5VZP5 1158 aa16.79■□□□□ 0.28
SHROOM3-204ENST00000473602 GIGYF2Q6Y7W6 1299 aaKnown RBP16.79■□□□□ 0.28
SHROOM3-204ENST00000473602 WWC1Q8IX03 1113 aa16.79■□□□□ 0.28
SHROOM3-204ENST00000473602 JDP2Q8WYK2 163 aa16.79■□□□□ 0.28
SHROOM3-204ENST00000473602 GJA3Q9Y6H8 435 aa16.79■□□□□ 0.28
SHROOM3-204ENST00000473602 IL16Q14005 1332 aa16.78■□□□□ 0.28
SHROOM3-204ENST00000473602 PROSER3Q2NL68 480 aa16.78■□□□□ 0.28
SHROOM3-204ENST00000473602 CHMP4AQ9BY43 222 aa16.78■□□□□ 0.28
SHROOM3-204ENST00000473602 NYXQ9GZU5 481 aa16.78■□□□□ 0.28
SHROOM3-204ENST00000473602 ZBTB3Q9H5J0 574 aa16.78■□□□□ 0.28
SHROOM3-204ENST00000473602 DBF4Q9UBU7 674 aaPredicted RBP16.78■□□□□ 0.28
SHROOM3-204ENST00000473602 EIF6P56537 245 aaKnown RBP16.77■□□□□ 0.28
SHROOM3-204ENST00000473602 FMR1Q06787 632 aaKnown RBP eCLIP16.77■□□□□ 0.28
SHROOM3-204ENST00000473602 NECTIN2Q92692 538 aa16.77■□□□□ 0.28
SHROOM3-204ENST00000473602 PSMD1Q99460 953 aa16.77■□□□□ 0.28
SHROOM3-204ENST00000473602 CHPF2Q9P2E5 772 aa16.77■□□□□ 0.28
SHROOM3-204ENST00000473602 CACNA1SQ13698 1873 aa16.77■□□□□ 0.27
SHROOM3-204ENST00000473602 RIC1Q4ADV7 1423 aa16.77■□□□□ 0.27
SHROOM3-204ENST00000473602 ANXA1P04083 346 aa16.76■□□□□ 0.27
SHROOM3-204ENST00000473602 CRY2Q49AN0 593 aa16.76■□□□□ 0.27
SHROOM3-204ENST00000473602 HSP90AB3PQ58FF7 597 aa16.76■□□□□ 0.27
SHROOM3-204ENST00000473602 NUTM1Q86Y26 1132 aa16.76■□□□□ 0.27
SHROOM3-204ENST00000473602 ZNF34Q8IZ26 560 aa16.76■□□□□ 0.27
SHROOM3-204ENST00000473602 LMOD1P29536 600 aaPredicted RBP16.75■□□□□ 0.27
SHROOM3-204ENST00000473602 EPS15P42566 896 aa16.75■□□□□ 0.27
SHROOM3-204ENST00000473602 FAM161AQ3B820 660 aa16.75■□□□□ 0.27
SHROOM3-204ENST00000473602 PARP10Q53GL7 1025 aa16.75■□□□□ 0.27
SHROOM3-204ENST00000473602 CC2D2BQ6DHV5 1058 aa16.75■□□□□ 0.27
SHROOM3-204ENST00000473602 COPS6Q7L5N1 327 aa16.75■□□□□ 0.27
SHROOM3-204ENST00000473602 FAM9BQ8IZU0 186 aa16.75■□□□□ 0.27
SHROOM3-204ENST00000473602 XAGE3Q8WTP9 111 aa16.75■□□□□ 0.27
SHROOM3-204ENST00000473602 HYPKQ9NX55 129 aa16.75■□□□□ 0.27
SHROOM3-204ENST00000473602 UBN2Q6ZU65 1347 aa16.74■□□□□ 0.27
SHROOM3-204ENST00000473602 GRM1Q13255 1194 aa16.74■□□□□ 0.27
SHROOM3-204ENST00000473602 PAXIP1Q6ZW49 1069 aaPredicted RBP16.74■□□□□ 0.27
SHROOM3-204ENST00000473602 CAPNS2Q96L46 248 aa16.74■□□□□ 0.27
SHROOM3-204ENST00000473602 SNED1Q8TER0 1413 aa16.73■□□□□ 0.27
SHROOM3-204ENST00000473602 GPTP24298 496 aa16.73■□□□□ 0.27
SHROOM3-204ENST00000473602 HOXA10P31260 410 aaPredicted RBP16.73■□□□□ 0.27
SHROOM3-204ENST00000473602 SCNN1DP51172 638 aa16.73■□□□□ 0.27
SHROOM3-204ENST00000473602 AIMP1Q12904 312 aaKnown RBP16.73■□□□□ 0.27
SHROOM3-204ENST00000473602 CST9Q5W186 159 aa16.73■□□□□ 0.27
SHROOM3-204ENST00000473602 CYP4F22Q6NT55 531 aa16.73■□□□□ 0.27
SHROOM3-204ENST00000473602 PPP1R42Q7Z4L9 355 aa16.73■□□□□ 0.27
SHROOM3-204ENST00000473602 WDR63Q8IWG1 891 aa16.73■□□□□ 0.27
SHROOM3-204ENST00000473602 LARGE2Q8N3Y3 721 aa16.73■□□□□ 0.27
SHROOM3-204ENST00000473602 RPGRQ92834 1020 aaKnown RBP16.73■□□□□ 0.27
SHROOM3-204ENST00000473602 GPR101Q96P66 508 aaPredicted RBP16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms