RNA–Protein interactions for RNA: ENST00000473420.5

CTDSP1-207, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-207ENST00000473420 NPHP1O15259 732 aa24.13■■□□□ 1.45
CTDSP1-207ENST00000473420 IGKV5-2P06315 115 aa24.13■■□□□ 1.45
CTDSP1-207ENST00000473420 LINS1Q8NG48 757 aa24.13■■□□□ 1.45
CTDSP1-207ENST00000473420 FAM177BA6PVY3 158 aa24.12■■□□□ 1.45
CTDSP1-207ENST00000473420 API5Q9BZZ5 524 aaKnown RBP24.12■■□□□ 1.45
CTDSP1-207ENST00000473420 DDX60Q8IY21 1712 aaKnown RBP24.11■■□□□ 1.45
CTDSP1-207ENST00000473420 NEURL1BA8MQ27 555 aa24.11■■□□□ 1.45
CTDSP1-207ENST00000473420 IPO8O15397 1037 aaKnown RBP24.11■■□□□ 1.45
CTDSP1-207ENST00000473420 GTF2E1P29083 439 aaPredicted RBP24.11■■□□□ 1.45
CTDSP1-207ENST00000473420 BEND3Q5T5X7 828 aa24.11■■□□□ 1.45
CTDSP1-207ENST00000473420 KLHL34Q8N239 644 aa24.11■■□□□ 1.45
CTDSP1-207ENST00000473420 SYT17Q9BSW7 474 aa24.11■■□□□ 1.45
CTDSP1-207ENST00000473420 BRIP1Q9BX63 1249 aa24.11■■□□□ 1.45
CTDSP1-207ENST00000473420 CWC25Q9NXE8 425 aaPredicted RBP24.11■■□□□ 1.45
CTDSP1-207ENST00000473420 RCAN3Q9UKA8 241 aa24.11■■□□□ 1.45
CTDSP1-207ENST00000473420 TGFB2P61812 414 aa24.1■■□□□ 1.45
CTDSP1-207ENST00000473420 TRMT112Q9UI30 125 aaKnown RBP24.1■■□□□ 1.45
CTDSP1-207ENST00000473420 TNRC6CQ9HCJ0 1690 aaKnown RBP24.1■■□□□ 1.45
CTDSP1-207ENST00000473420 SH3TC1Q8TE82 1336 aa24.1■■□□□ 1.45
CTDSP1-207ENST00000473420 BRCA1P38398 1863 aaKnown RBP24.09■■□□□ 1.45
CTDSP1-207ENST00000473420 PDZRN3Q9UPQ7 1066 aa24.09■■□□□ 1.45
CTDSP1-207ENST00000473420 COL11A2P13942 1736 aaPredicted RBP24.09■■□□□ 1.45
CTDSP1-207ENST00000473420 ABCC12Q96J65 1359 aa24.08■■□□□ 1.45
CTDSP1-207ENST00000473420 ALDH1L1O75891 902 aa24.08■■□□□ 1.45
CTDSP1-207ENST00000473420 PDE6BP35913 854 aa24.08■■□□□ 1.45
CTDSP1-207ENST00000473420 CWF19L2Q2TBE0 894 aaKnown RBP24.08■■□□□ 1.45
CTDSP1-207ENST00000473420 ERFEQ4G0M1 354 aa24.08■■□□□ 1.45
CTDSP1-207ENST00000473420 NUTM1Q86Y26 1132 aa24.08■■□□□ 1.45
CTDSP1-207ENST00000473420 ZBTB38Q8NAP3 1195 aaPredicted RBP24.08■■□□□ 1.45
CTDSP1-207ENST00000473420 PCCAP05165 728 aaPredicted RBP24.07■■□□□ 1.44
CTDSP1-207ENST00000473420 GCKRQ14397 625 aa24.07■■□□□ 1.44
CTDSP1-207ENST00000473420 SLC10A5Q5PT55 438 aa24.07■■□□□ 1.44
CTDSP1-207ENST00000473420 SLC4A10Q6U841 1118 aa24.07■■□□□ 1.44
CTDSP1-207ENST00000473420 SRCIN1Q9C0H9 1055 aa24.07■■□□□ 1.44
CTDSP1-207ENST00000473420 ZKSCAN2Q63HK3 967 aa24.06■■□□□ 1.44
CTDSP1-207ENST00000473420 ATF7IPQ6VMQ6 1270 aa24.06■■□□□ 1.44
CTDSP1-207ENST00000473420 CCDC24Q8N4L8 307 aa24.06■■□□□ 1.44
CTDSP1-207ENST00000473420 FRAT1Q92837 279 aaPredicted RBP24.06■■□□□ 1.44
CTDSP1-207ENST00000473420 MYH3P11055 1940 aa24.06■■□□□ 1.44
CTDSP1-207ENST00000473420 SRCAPQ6ZRS2 3230 aa24.05■■□□□ 1.44
CTDSP1-207ENST00000473420 KLRG2A4D1S0 409 aaPredicted RBP24.05■■□□□ 1.44
CTDSP1-207ENST00000473420 NLGN2Q8NFZ4 835 aa24.05■■□□□ 1.44
CTDSP1-207ENST00000473420 ABCC4O15439 1325 aa24.05■■□□□ 1.44
CTDSP1-207ENST00000473420 CDHR2Q9BYE9 1310 aa24.05■■□□□ 1.44
CTDSP1-207ENST00000473420 TRIM27P14373 513 aa24.04■■□□□ 1.44
CTDSP1-207ENST00000473420 HSP90B1P14625 803 aaKnown RBP24.04■■□□□ 1.44
CTDSP1-207ENST00000473420 FAM89AQ96GI7 184 aa24.04■■□□□ 1.44
CTDSP1-207ENST00000473420 CCT4P50991 539 aaKnown RBP24.03■■□□□ 1.44
CTDSP1-207ENST00000473420 H7C1W4 665 aa24.02■■□□□ 1.44
CTDSP1-207ENST00000473420 H0YIN7 160 aa24.01■■□□□ 1.43
CTDSP1-207ENST00000473420 DPEP1P16444 411 aa24.01■■□□□ 1.43
CTDSP1-207ENST00000473420 CRY2Q49AN0 593 aa24.01■■□□□ 1.43
CTDSP1-207ENST00000473420 C2CD5Q86YS7 1000 aa24.01■■□□□ 1.43
CTDSP1-207ENST00000473420 SYNE4Q8N205 404 aa24.01■■□□□ 1.43
CTDSP1-207ENST00000473420 NLRP3Q96P20 1036 aa24.01■■□□□ 1.43
CTDSP1-207ENST00000473420 IRS4O14654 1257 aaPredicted RBP24■■□□□ 1.43
CTDSP1-207ENST00000473420 INTS3Q68E01 1043 aaKnown RBP24■■□□□ 1.43
CTDSP1-207ENST00000473420 ARFGEF1Q9Y6D6 1849 aa23.99■■□□□ 1.43
CTDSP1-207ENST00000473420 CACNA1SQ13698 1873 aa23.99■■□□□ 1.43
CTDSP1-207ENST00000473420 A0A0G2JLW4 131 aa23.99■■□□□ 1.43
CTDSP1-207ENST00000473420 SRGNP10124 158 aa23.99■■□□□ 1.43
CTDSP1-207ENST00000473420 HCLS1P14317 486 aaPredicted RBP23.99■■□□□ 1.43
CTDSP1-207ENST00000473420 KCNA3P22001 575 aa23.99■■□□□ 1.43
CTDSP1-207ENST00000473420 CHRNA5P30532 468 aa23.99■■□□□ 1.43
CTDSP1-207ENST00000473420 CASP7P55210 303 aa23.99■■□□□ 1.43
CTDSP1-207ENST00000473420 GRM8O00222 908 aa23.98■■□□□ 1.43
CTDSP1-207ENST00000473420 MS4A1P11836 297 aa23.98■■□□□ 1.43
CTDSP1-207ENST00000473420 RTL5Q5HYW3 569 aaPredicted RBP23.98■■□□□ 1.43
CTDSP1-207ENST00000473420 UBE3BQ7Z3V4 1068 aa23.98■■□□□ 1.43
CTDSP1-207ENST00000473420 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.98■■□□□ 1.43
CTDSP1-207ENST00000473420 MASTLQ96GX5 879 aa23.98■■□□□ 1.43
CTDSP1-207ENST00000473420 C9orf78Q9NZ63 289 aaPredicted RBP23.98■■□□□ 1.43
CTDSP1-207ENST00000473420 UTYO14607 1347 aa23.98■■□□□ 1.43
CTDSP1-207ENST00000473420 PDE8AO60658 829 aa23.97■■□□□ 1.43
CTDSP1-207ENST00000473420 NPR1P16066 1061 aa23.97■■□□□ 1.43
CTDSP1-207ENST00000473420 STYK1Q6J9G0 422 aa23.97■■□□□ 1.43
CTDSP1-207ENST00000473420 DZIP1LQ8IYY4 767 aaKnown RBP23.97■■□□□ 1.43
CTDSP1-207ENST00000473420 PLA2G12BQ9BX93 195 aa23.97■■□□□ 1.43
CTDSP1-207ENST00000473420 PIM2Q9P1W9 311 aa23.97■■□□□ 1.43
CTDSP1-207ENST00000473420 SF3B3Q15393 1217 aaKnown RBP23.96■■□□□ 1.43
CTDSP1-207ENST00000473420 FTSJ3Q8IY81 847 aaKnown RBP23.96■■□□□ 1.43
CTDSP1-207ENST00000473420 CLUAP1Q96AJ1 413 aa23.96■■□□□ 1.43
CTDSP1-207ENST00000473420 TNNQ9UQP3 1299 aa23.96■■□□□ 1.43
CTDSP1-207ENST00000473420 C3orf67Q6ZVT6 689 aa23.95■■□□□ 1.42
CTDSP1-207ENST00000473420 JARID2Q92833 1246 aaPredicted RBP23.95■■□□□ 1.42
CTDSP1-207ENST00000473420 HOXA10P31260 410 aaPredicted RBP23.94■■□□□ 1.42
CTDSP1-207ENST00000473420 RPGRQ92834 1020 aaKnown RBP23.94■■□□□ 1.42
CTDSP1-207ENST00000473420 CNKSR1Q969H4 720 aa23.93■■□□□ 1.42
CTDSP1-207ENST00000473420 RBM17Q96I25 401 aaKnown RBP23.93■■□□□ 1.42
CTDSP1-207ENST00000473420 USP44Q9H0E7 712 aa23.93■■□□□ 1.42
CTDSP1-207ENST00000473420 NBPF7P0C2Y1 421 aaPredicted RBP23.92■■□□□ 1.42
CTDSP1-207ENST00000473420 ALDH1B1P30837 517 aa23.92■■□□□ 1.42
CTDSP1-207ENST00000473420 TMEM57Q8N5G2 664 aa23.92■■□□□ 1.42
CTDSP1-207ENST00000473420 TTLL6Q8N841 843 aa23.92■■□□□ 1.42
CTDSP1-207ENST00000473420 ZNF622Q969S3 477 aaKnown RBP eCLIP23.92■■□□□ 1.42
CTDSP1-207ENST00000473420 CRAMP1Q96RY5 1269 aa23.92■■□□□ 1.42
CTDSP1-207ENST00000473420 SLX4Q8IY92 1834 aa23.91■■□□□ 1.42
CTDSP1-207ENST00000473420 CTSWP56202 376 aa23.91■■□□□ 1.42
CTDSP1-207ENST00000473420 DALRD3Q5D0E6 543 aaKnown RBP23.91■■□□□ 1.42
CTDSP1-207ENST00000473420 RLBP1P12271 317 aa23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms