RNA–Protein interactions for RNA: ENST00000473417.5

SNX4-204, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-204ENST00000473417 NTSR2O95665 410 aa23.43■■□□□ 1.34
SNX4-204ENST00000473417 FSTL1Q12841 308 aa23.43■■□□□ 1.34
SNX4-204ENST00000473417 SUSD4Q5VX71 490 aa23.43■■□□□ 1.34
SNX4-204ENST00000473417 ZNF853P0CG23 659 aa23.42■■□□□ 1.34
SNX4-204ENST00000473417 MBIPQ9NS73 344 aa23.42■■□□□ 1.34
SNX4-204ENST00000473417 IFT57Q9NWB7 429 aa23.42■■□□□ 1.34
SNX4-204ENST00000473417 SCN4AP35499 1836 aa23.41■■□□□ 1.34
SNX4-204ENST00000473417 ALDH1B1P30837 517 aa23.41■■□□□ 1.34
SNX4-204ENST00000473417 GNAI1P63096 354 aa23.41■■□□□ 1.34
SNX4-204ENST00000473417 NCBP3Q53F19 620 aaKnown RBP23.41■■□□□ 1.34
SNX4-204ENST00000473417 PARP10Q53GL7 1025 aa23.41■■□□□ 1.34
SNX4-204ENST00000473417 NECTIN2Q92692 538 aa23.41■■□□□ 1.34
SNX4-204ENST00000473417 DDX21Q9NR30 783 aaKnown RBP eCLIP23.41■■□□□ 1.34
SNX4-204ENST00000473417 DDX60Q8IY21 1712 aaKnown RBP23.41■■□□□ 1.34
SNX4-204ENST00000473417 HOXB7P09629 217 aa23.4■■□□□ 1.34
SNX4-204ENST00000473417 VEGFAP15692 232 aaPredicted RBP23.39■■□□□ 1.33
SNX4-204ENST00000473417 FKBP4Q02790 459 aaKnown RBP eCLIP23.39■■□□□ 1.33
SNX4-204ENST00000473417 OLFM4Q6UX06 510 aa23.39■■□□□ 1.33
SNX4-204ENST00000473417 COPS6Q7L5N1 327 aa23.39■■□□□ 1.33
SNX4-204ENST00000473417 PPP1R42Q7Z4L9 355 aa23.39■■□□□ 1.33
SNX4-204ENST00000473417 HOXA10P31260 410 aaPredicted RBP23.38■■□□□ 1.33
SNX4-204ENST00000473417 DPY19L2Q6NUT2 758 aa23.38■■□□□ 1.33
SNX4-204ENST00000473417 XAGE3Q8WTP9 111 aa23.38■■□□□ 1.33
SNX4-204ENST00000473417 CHPF2Q9P2E5 772 aa23.38■■□□□ 1.33
SNX4-204ENST00000473417 RNF123Q5XPI4 1314 aa23.37■■□□□ 1.33
SNX4-204ENST00000473417 POTECB2RU33 542 aa23.37■■□□□ 1.33
SNX4-204ENST00000473417 RTKN2Q8IZC4 609 aa23.37■■□□□ 1.33
SNX4-204ENST00000473417 AIMP1Q12904 312 aaKnown RBP23.36■■□□□ 1.33
SNX4-204ENST00000473417 HSP90AB3PQ58FF7 597 aa23.36■■□□□ 1.33
SNX4-204ENST00000473417 HDGFL1Q5TGJ6 251 aa23.36■■□□□ 1.33
SNX4-204ENST00000473417 DNAJC5GQ8N7S2 189 aa23.36■■□□□ 1.33
SNX4-204ENST00000473417 SMC1BQ8NDV3 1235 aa23.36■■□□□ 1.33
SNX4-204ENST00000473417 RPGRQ92834 1020 aaKnown RBP23.36■■□□□ 1.33
SNX4-204ENST00000473417 TAF1P21675 1872 aa23.36■■□□□ 1.33
SNX4-204ENST00000473417 TSR2Q969E8 191 aaKnown RBP23.35■■□□□ 1.33
SNX4-204ENST00000473417 C3orf67Q6ZVT6 689 aa23.34■■□□□ 1.33
SNX4-204ENST00000473417 WDR63Q8IWG1 891 aa23.34■■□□□ 1.33
SNX4-204ENST00000473417 UTP14AQ9BVJ6 771 aaKnown RBP23.34■■□□□ 1.33
SNX4-204ENST00000473417 SLC10A5Q5PT55 438 aa23.33■■□□□ 1.33
SNX4-204ENST00000473417 DUSP27Q5VZP5 1158 aa23.33■■□□□ 1.33
SNX4-204ENST00000473417 NLRP10Q86W26 655 aa23.33■■□□□ 1.33
SNX4-204ENST00000473417 CRAMP1Q96RY5 1269 aa23.33■■□□□ 1.33
SNX4-204ENST00000473417 ZNF277Q9NRM2 450 aaPredicted RBP23.33■■□□□ 1.33
SNX4-204ENST00000473417 DBF4Q9UBU7 674 aaPredicted RBP23.33■■□□□ 1.33
SNX4-204ENST00000473417 IL16Q14005 1332 aa23.33■■□□□ 1.32
SNX4-204ENST00000473417 COL4A5P29400 1685 aa23.32■■□□□ 1.32
SNX4-204ENST00000473417 ELL2O00472 640 aaPredicted RBP23.32■■□□□ 1.32
SNX4-204ENST00000473417 DDNO94850 711 aaPredicted RBP23.32■■□□□ 1.32
SNX4-204ENST00000473417 TCIRG1Q13488 830 aa23.32■■□□□ 1.32
SNX4-204ENST00000473417 CC2D2BQ6DHV5 1058 aa23.32■■□□□ 1.32
SNX4-204ENST00000473417 RBM17Q96I25 401 aaKnown RBP23.32■■□□□ 1.32
SNX4-204ENST00000473417 PSMD1Q99460 953 aa23.32■■□□□ 1.32
SNX4-204ENST00000473417 LRRC37AA6NMS7 1700 aa23.32■■□□□ 1.32
SNX4-204ENST00000473417 NLRP3Q96P20 1036 aa23.31■■□□□ 1.32
SNX4-204ENST00000473417 IARSP41252 1262 aaKnown RBP23.3■■□□□ 1.32
SNX4-204ENST00000473417 SYNE4Q8N205 404 aa23.3■■□□□ 1.32
SNX4-204ENST00000473417 C8orf58Q8NAV2 365 aa23.3■■□□□ 1.32
SNX4-204ENST00000473417 PLBD2Q8NHP8 589 aa23.3■■□□□ 1.32
SNX4-204ENST00000473417 ADAMTSL1Q8N6G6 1762 aa23.29■■□□□ 1.32
SNX4-204ENST00000473417 PPEF1O14829 653 aaPredicted RBP23.29■■□□□ 1.32
SNX4-204ENST00000473417 HYPKQ9NX55 129 aa23.29■■□□□ 1.32
SNX4-204ENST00000473417 ZNF541Q9H0D2 1346 aa23.29■■□□□ 1.32
SNX4-204ENST00000473417 GRIPAP1Q4V328 841 aa23.28■■□□□ 1.32
SNX4-204ENST00000473417 SLC51AQ86UW1 340 aa23.28■■□□□ 1.32
SNX4-204ENST00000473417 L3MBTL3Q96JM7 780 aaPredicted RBP23.28■■□□□ 1.32
SNX4-204ENST00000473417 SPINK5Q9NQ38 1064 aaPredicted RBP23.28■■□□□ 1.32
SNX4-204ENST00000473417 ANKRD13DQ6ZTN6 518 aa23.27■■□□□ 1.32
SNX4-204ENST00000473417 TSPYL6Q8N831 410 aa23.27■■□□□ 1.32
SNX4-204ENST00000473417 TRMT112Q9UI30 125 aaKnown RBP23.27■■□□□ 1.32
SNX4-204ENST00000473417 ABCC4O15439 1325 aa23.27■■□□□ 1.32
SNX4-204ENST00000473417 SH3TC1Q8TE82 1336 aa23.27■■□□□ 1.32
SNX4-204ENST00000473417 FANCIQ9NVI1 1328 aa23.27■■□□□ 1.32
SNX4-204ENST00000473417 HTRA3P83110 453 aa23.26■■□□□ 1.31
SNX4-204ENST00000473417 ISCA1Q9BUE6 129 aa23.26■■□□□ 1.31
SNX4-204ENST00000473417 ZNF521Q96K83 1311 aa23.26■■□□□ 1.31
SNX4-204ENST00000473417 FZD9O00144 591 aa23.25■■□□□ 1.31
SNX4-204ENST00000473417 HCLS1P14317 486 aaPredicted RBP23.25■■□□□ 1.31
SNX4-204ENST00000473417 IFFO2Q5TF58 517 aa23.25■■□□□ 1.31
SNX4-204ENST00000473417 KLRG1Q96E93 195 aa23.25■■□□□ 1.31
SNX4-204ENST00000473417 IQCA1LA6NCM1 817 aa23.24■■□□□ 1.31
SNX4-204ENST00000473417 GOLGA2Q08379 1002 aa23.24■■□□□ 1.31
SNX4-204ENST00000473417 LTBP1Q14766 1721 aa23.24■■□□□ 1.31
SNX4-204ENST00000473417 CACNA1FO60840 1977 aa23.23■■□□□ 1.31
SNX4-204ENST00000473417 MYH16Q9H6N6 1097 aa23.23■■□□□ 1.31
SNX4-204ENST00000473417 ATP6V0A2Q9Y487 856 aa23.23■■□□□ 1.31
SNX4-204ENST00000473417 DUOX1Q9NRD9 1551 aa23.23■■□□□ 1.31
SNX4-204ENST00000473417 COL4A1P02462 1669 aa23.22■■□□□ 1.31
SNX4-204ENST00000473417 TCERG1O14776 1098 aaKnown RBP23.22■■□□□ 1.31
SNX4-204ENST00000473417 JDP2Q8WYK2 163 aa23.22■■□□□ 1.31
SNX4-204ENST00000473417 ATP5J2-PTCD1G3V325 749 aa23.21■■□□□ 1.31
SNX4-204ENST00000473417 POTEIP0CG38 1075 aa23.21■■□□□ 1.31
SNX4-204ENST00000473417 POTEJP0CG39 1038 aa23.21■■□□□ 1.31
SNX4-204ENST00000473417 TWISTNBQ3B726 338 aaPredicted RBP23.21■■□□□ 1.31
SNX4-204ENST00000473417 JMYQ8N9B5 988 aa23.21■■□□□ 1.31
SNX4-204ENST00000473417 TAF1DQ9H5J8 278 aaPredicted RBP23.21■■□□□ 1.31
SNX4-204ENST00000473417 PHAXQ9H814 394 aaKnown RBP23.21■■□□□ 1.31
SNX4-204ENST00000473417 MYH3P11055 1940 aa23.21■■□□□ 1.31
SNX4-204ENST00000473417 PCNTO95613 3336 aa23.2■■□□□ 1.3
SNX4-204ENST00000473417 EXOSC9Q06265 439 aaKnown RBP23.2■■□□□ 1.3
SNX4-204ENST00000473417 TRIM28Q13263 835 aaKnown RBP23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms