RNA–Protein interactions for RNA: ENST00000472224.1

CLRN1-205, Transcript of clarin 1, humanhuman

TSL 3

Gene CLRN1, Length 606 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-205ENST00000472224 WBP1LQ9NX94 342 aa15.39■□□□□ 0.05
CLRN1-205ENST00000472224 CCER2I3L3R5 266 aa15.38■□□□□ 0.05
CLRN1-205ENST00000472224 NPHP1O15259 732 aa15.38■□□□□ 0.05
CLRN1-205ENST00000472224 HDGFL1Q5TGJ6 251 aa15.38■□□□□ 0.05
CLRN1-205ENST00000472224 DUSP27Q5VZP5 1158 aa15.38■□□□□ 0.05
CLRN1-205ENST00000472224 TTLL6Q8N841 843 aa15.38■□□□□ 0.05
CLRN1-205ENST00000472224 ZNF652Q9Y2D9 606 aa15.38■□□□□ 0.05
CLRN1-205ENST00000472224 ERBB4Q15303 1308 aa15.38■□□□□ 0.05
CLRN1-205ENST00000472224 CACNA1SQ13698 1873 aa15.37■□□□□ 0.05
CLRN1-205ENST00000472224 ADAMTSL1Q8N6G6 1762 aa15.37■□□□□ 0.05
CLRN1-205ENST00000472224 ELL2O00472 640 aaPredicted RBP15.37■□□□□ 0.05
CLRN1-205ENST00000472224 PROSER3Q2NL68 480 aa15.37■□□□□ 0.05
CLRN1-205ENST00000472224 AIDAQ96BJ3 306 aa15.37■□□□□ 0.05
CLRN1-205ENST00000472224 SCN4AP35499 1836 aa15.36■□□□□ 0.05
CLRN1-205ENST00000472224 SERPINB2P05120 415 aa15.36■□□□□ 0.05
CLRN1-205ENST00000472224 HSPA8P11142 646 aaKnown RBP15.36■□□□□ 0.05
CLRN1-205ENST00000472224 DPY19L2Q6NUT2 758 aa15.36■□□□□ 0.05
CLRN1-205ENST00000472224 TTLL7Q6ZT98 887 aa15.36■□□□□ 0.05
CLRN1-205ENST00000472224 ZBTB3Q9H5J0 574 aa15.36■□□□□ 0.05
CLRN1-205ENST00000472224 CHPF2Q9P2E5 772 aa15.36■□□□□ 0.05
CLRN1-205ENST00000472224 ZBTB12Q9Y330 459 aaPredicted RBP15.36■□□□□ 0.05
CLRN1-205ENST00000472224 THSD7BQ9C0I4 1608 aa15.35■□□□□ 0.05
CLRN1-205ENST00000472224 ANKRD36CQ5JPF3 1778 aa15.35■□□□□ 0.05
CLRN1-205ENST00000472224 HOXB7P09629 217 aa15.35■□□□□ 0.05
CLRN1-205ENST00000472224 AIMP1Q12904 312 aaKnown RBP15.35■□□□□ 0.05
CLRN1-205ENST00000472224 C2CD5Q86YS7 1000 aa15.35■□□□□ 0.05
CLRN1-205ENST00000472224 MIER1Q8N108 512 aa15.35■□□□□ 0.05
CLRN1-205ENST00000472224 SETDB2Q96T68 719 aa15.35■□□□□ 0.05
CLRN1-205ENST00000472224 MAP3K15Q6ZN16 1313 aa15.35■□□□□ 0.05
CLRN1-205ENST00000472224 FAM177BA6PVY3 158 aa15.34■□□□□ 0.05
CLRN1-205ENST00000472224 DDNO94850 711 aaPredicted RBP15.34■□□□□ 0.05
CLRN1-205ENST00000472224 PDIA6Q15084 440 aa15.34■□□□□ 0.05
CLRN1-205ENST00000472224 HLFQ16534 295 aa15.34■□□□□ 0.05
CLRN1-205ENST00000472224 ERFEQ4G0M1 354 aa15.34■□□□□ 0.05
CLRN1-205ENST00000472224 CCDC24Q8N4L8 307 aa15.34■□□□□ 0.05
CLRN1-205ENST00000472224 C8orf58Q8NAV2 365 aa15.34■□□□□ 0.05
CLRN1-205ENST00000472224 NIP7Q9Y221 180 aaKnown RBP eCLIP15.34■□□□□ 0.05
CLRN1-205ENST00000472224 IL16Q14005 1332 aa15.34■□□□□ 0.05
CLRN1-205ENST00000472224 ARFGEF2Q9Y6D5 1785 aa15.34■□□□□ 0.05
CLRN1-205ENST00000472224 RGS19P49795 217 aa15.33■□□□□ 0.04
CLRN1-205ENST00000472224 MLLT1Q03111 559 aaPredicted RBP15.33■□□□□ 0.04
CLRN1-205ENST00000472224 CNBD1Q8NA66 436 aa15.33■□□□□ 0.04
CLRN1-205ENST00000472224 XAGE3Q8WTP9 111 aa15.33■□□□□ 0.04
CLRN1-205ENST00000472224 DDX21Q9NR30 783 aaKnown RBP eCLIP15.33■□□□□ 0.04
CLRN1-205ENST00000472224 FANCIQ9NVI1 1328 aa15.33■□□□□ 0.04
CLRN1-205ENST00000472224 SLX4Q8IY92 1834 aa15.32■□□□□ 0.04
CLRN1-205ENST00000472224 ITGBL1O95965 494 aaPredicted RBP15.32■□□□□ 0.04
CLRN1-205ENST00000472224 GPTP24298 496 aa15.32■□□□□ 0.04
CLRN1-205ENST00000472224 CLEC4GQ6UXB4 293 aa15.32■□□□□ 0.04
CLRN1-205ENST00000472224 NBPF5PQ86XG9 351 aaPredicted RBP15.32■□□□□ 0.04
CLRN1-205ENST00000472224 WDR63Q8IWG1 891 aa15.32■□□□□ 0.04
CLRN1-205ENST00000472224 TSPYL6Q8N831 410 aa15.32■□□□□ 0.04
CLRN1-205ENST00000472224 TMEM88BA6NKF7 163 aa15.31■□□□□ 0.04
CLRN1-205ENST00000472224 ERVV-1B6SEH8 477 aa15.31■□□□□ 0.04
CLRN1-205ENST00000472224 H0YIN7 160 aa15.31■□□□□ 0.04
CLRN1-205ENST00000472224 C21orf2O43822 256 aa15.31■□□□□ 0.04
CLRN1-205ENST00000472224 ST5P78524 1137 aa15.31■□□□□ 0.04
CLRN1-205ENST00000472224 PRR5LQ6MZQ0 368 aa15.31■□□□□ 0.04
CLRN1-205ENST00000472224 COPS6Q7L5N1 327 aa15.31■□□□□ 0.04
CLRN1-205ENST00000472224 LRP10Q7Z4F1 713 aa15.31■□□□□ 0.04
CLRN1-205ENST00000472224 LDHDQ86WU2 507 aa15.31■□□□□ 0.04
CLRN1-205ENST00000472224 DBF4Q9UBU7 674 aaPredicted RBP15.31■□□□□ 0.04
CLRN1-205ENST00000472224 TCERG1O14776 1098 aaKnown RBP15.3■□□□□ 0.04
CLRN1-205ENST00000472224 LTBP3Q9NS15 1303 aa15.29■□□□□ 0.04
CLRN1-205ENST00000472224 RASSF10A6NK89 507 aa15.29■□□□□ 0.04
CLRN1-205ENST00000472224 CCDC85CA6NKD9 419 aa15.29■□□□□ 0.04
CLRN1-205ENST00000472224 TWISTNBQ3B726 338 aaPredicted RBP15.29■□□□□ 0.04
CLRN1-205ENST00000472224 CCDC30Q5VVM6 783 aa15.29■□□□□ 0.04
CLRN1-205ENST00000472224 TAF1DQ9H5J8 278 aaPredicted RBP15.29■□□□□ 0.04
CLRN1-205ENST00000472224 MYH16Q9H6N6 1097 aa15.29■□□□□ 0.04
CLRN1-205ENST00000472224 CACNA1FO60840 1977 aa15.29■□□□□ 0.04
CLRN1-205ENST00000472224 RGL2O15211 777 aa15.28■□□□□ 0.04
CLRN1-205ENST00000472224 GTF2E1P29083 439 aaPredicted RBP15.28■□□□□ 0.04
CLRN1-205ENST00000472224 GOLGA2Q08379 1002 aa15.28■□□□□ 0.04
CLRN1-205ENST00000472224 GIGYF2Q6Y7W6 1299 aaKnown RBP15.28■□□□□ 0.04
CLRN1-205ENST00000472224 L3MBTL3Q96JM7 780 aaPredicted RBP15.28■□□□□ 0.04
CLRN1-205ENST00000472224 HYPKQ9NX55 129 aa15.28■□□□□ 0.04
CLRN1-205ENST00000472224 LTBP1Q14766 1721 aa15.28■□□□□ 0.04
CLRN1-205ENST00000472224 UBN2Q6ZU65 1347 aa15.27■□□□□ 0.04
CLRN1-205ENST00000472224 EXOSC9Q06265 439 aaKnown RBP15.27■□□□□ 0.04
CLRN1-205ENST00000472224 ZNF622Q969S3 477 aaKnown RBP eCLIP15.27■□□□□ 0.04
CLRN1-205ENST00000472224 STK31Q9BXU1 1019 aa15.27■□□□□ 0.04
CLRN1-205ENST00000472224 TAOK3Q9H2K8 898 aa15.27■□□□□ 0.04
CLRN1-205ENST00000472224 ABCC12Q96J65 1359 aa15.26■□□□□ 0.03
CLRN1-205ENST00000472224 ZNF521Q96K83 1311 aa15.26■□□□□ 0.03
CLRN1-205ENST00000472224 WDR33Q9C0J8 1336 aaKnown RBP15.26■□□□□ 0.03
CLRN1-205ENST00000472224 IQCA1LA6NCM1 817 aa15.26■□□□□ 0.03
CLRN1-205ENST00000472224 PDE6BP35913 854 aa15.26■□□□□ 0.03
CLRN1-205ENST00000472224 TPTE2Q6XPS3 522 aa15.26■□□□□ 0.03
CLRN1-205ENST00000472224 NUTM1Q86Y26 1132 aa15.26■□□□□ 0.03
CLRN1-205ENST00000472224 ZNF428Q96B54 188 aa15.26■□□□□ 0.03
CLRN1-205ENST00000472224 BRIP1Q9BX63 1249 aa15.26■□□□□ 0.03
CLRN1-205ENST00000472224 CHMP4AQ9BY43 222 aa15.26■□□□□ 0.03
CLRN1-205ENST00000472224 DEFB115Q30KQ5 88 aa15.25■□□□□ 0.03
CLRN1-205ENST00000472224 HSP90AB3PQ58FF7 597 aa15.25■□□□□ 0.03
CLRN1-205ENST00000472224 NYXQ9GZU5 481 aa15.25■□□□□ 0.03
CLRN1-205ENST00000472224 PHAXQ9H814 394 aaKnown RBP15.25■□□□□ 0.03
CLRN1-205ENST00000472224 MAP2K1Q02750 393 aaPredicted RBP15.24■□□□□ 0.03
CLRN1-205ENST00000472224 SUSD4Q5VX71 490 aa15.24■□□□□ 0.03
CLRN1-205ENST00000472224 ANKRD13DQ6ZTN6 518 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms