RNA–Protein interactions for RNA: ENST00000472129.3

CLTC-204, Transcript of clathrin heavy chain, humanhuman

TSL 2

Gene CLTC, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-204ENST00000472129 NEURL1BA8MQ27 555 aa9.14□□□□□ -0.95
CLTC-204ENST00000472129 TGFBR3LH3BV60 316 aa9.14□□□□□ -0.95
CLTC-204ENST00000472129 OIP5O43482 229 aa9.14□□□□□ -0.95
CLTC-204ENST00000472129 PCBP4P57723 403 aaKnown RBP9.14□□□□□ -0.95
CLTC-204ENST00000472129 C11orf91Q3C1V1 193 aa9.14□□□□□ -0.95
CLTC-204ENST00000472129 GALNT6Q8NCL4 622 aa9.14□□□□□ -0.95
CLTC-204ENST00000472129 DCAF5Q96JK2 942 aa9.14□□□□□ -0.95
CLTC-204ENST00000472129 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.14□□□□□ -0.95
CLTC-204ENST00000472129 ITGB2P05107 769 aa9.13□□□□□ -0.95
CLTC-204ENST00000472129 ARAFP10398 606 aa9.13□□□□□ -0.95
CLTC-204ENST00000472129 HIF1AQ16665 826 aa9.13□□□□□ -0.95
CLTC-204ENST00000472129 PLA2G4EQ3MJ16 856 aa9.13□□□□□ -0.95
CLTC-204ENST00000472129 IER5Q5VY09 327 aa9.13□□□□□ -0.95
CLTC-204ENST00000472129 RAB44Q7Z6P3 723 aaPredicted RBP9.13□□□□□ -0.95
CLTC-204ENST00000472129 PRR12Q9ULL5 1215 aa9.13□□□□□ -0.95
CLTC-204ENST00000472129 SHISA8B8ZZ34 492 aa9.12□□□□□ -0.95
CLTC-204ENST00000472129 GRNP28799 593 aaKnown RBP9.12□□□□□ -0.95
CLTC-204ENST00000472129 FAM26DQ5JW98 314 aa9.12□□□□□ -0.95
CLTC-204ENST00000472129 GOLGA6L1Q8N7Z2 621 aa9.12□□□□□ -0.95
CLTC-204ENST00000472129 IFT43Q96FT9 208 aa9.12□□□□□ -0.95
CLTC-204ENST00000472129 SEPT3Q9UH03 358 aa9.12□□□□□ -0.95
CLTC-204ENST00000472129 GDF2Q9UK05 429 aaPredicted RBP9.12□□□□□ -0.95
CLTC-204ENST00000472129 KCNH4Q9UQ05 1017 aa9.12□□□□□ -0.95
CLTC-204ENST00000472129 PHF20L1A8MW92 1017 aa9.11□□□□□ -0.95
CLTC-204ENST00000472129 IDH3AP50213 366 aa9.11□□□□□ -0.95
CLTC-204ENST00000472129 KCNQ4P56696 695 aa9.11□□□□□ -0.95
CLTC-204ENST00000472129 SPEM2Q0P670 501 aa9.11□□□□□ -0.95
CLTC-204ENST00000472129 ZNF468Q5VIY5 522 aaPredicted RBP9.11□□□□□ -0.95
CLTC-204ENST00000472129 C16orf46Q6P387 395 aa9.11□□□□□ -0.95
CLTC-204ENST00000472129 EDARADDQ8WWZ3 215 aa9.11□□□□□ -0.95
CLTC-204ENST00000472129 COL26A1Q96A83 441 aa9.11□□□□□ -0.95
CLTC-204ENST00000472129 MICAL2O94851 1124 aa9.1□□□□□ -0.95
CLTC-204ENST00000472129 INPP5BP32019 993 aa9.1□□□□□ -0.95
CLTC-204ENST00000472129 SLCO4C1Q6ZQN7 724 aa9.1□□□□□ -0.95
CLTC-204ENST00000472129 SYT9Q86SS6 491 aa9.1□□□□□ -0.95
CLTC-204ENST00000472129 FCHSD1Q86WN1 690 aa9.1□□□□□ -0.95
CLTC-204ENST00000472129 NEDD1Q8NHV4 660 aa9.1□□□□□ -0.95
CLTC-204ENST00000472129 TNFRSF10BO14763 440 aa9.09□□□□□ -0.95
CLTC-204ENST00000472129 MSTNO14793 375 aa9.09□□□□□ -0.95
CLTC-204ENST00000472129 OPLAHO14841 1288 aa9.09□□□□□ -0.95
CLTC-204ENST00000472129 PTCD1O75127 700 aaKnown RBP9.09□□□□□ -0.95
CLTC-204ENST00000472129 SSFA2P28290 1259 aa9.09□□□□□ -0.95
CLTC-204ENST00000472129 ADH6P28332 368 aa9.09□□□□□ -0.95
CLTC-204ENST00000472129 ETFBKMTQ8IXQ9 262 aa9.09□□□□□ -0.95
CLTC-204ENST00000472129 BEND7Q8N7W2 519 aaPredicted RBP9.09□□□□□ -0.95
CLTC-204ENST00000472129 SPOCK3Q9BQ16 436 aa9.09□□□□□ -0.95
CLTC-204ENST00000472129 LRRC4BQ9NT99 713 aa9.09□□□□□ -0.95
CLTC-204ENST00000472129 USP20Q9Y2K6 914 aa9.09□□□□□ -0.95
CLTC-204ENST00000472129 EPXP11678 715 aa9.08□□□□□ -0.96
CLTC-204ENST00000472129 PHLDB3Q6NSJ2 640 aa9.08□□□□□ -0.96
CLTC-204ENST00000472129 TREML1Q86YW5 311 aa9.08□□□□□ -0.96
CLTC-204ENST00000472129 AVENQ9NQS1 362 aaPredicted RBP9.08□□□□□ -0.96
CLTC-204ENST00000472129 PODNQ7Z5L7 613 aa9.07□□□□□ -0.96
CLTC-204ENST00000472129 ADAM23O75077 832 aa9.06□□□□□ -0.96
CLTC-204ENST00000472129 PROCP04070 461 aa9.06□□□□□ -0.96
CLTC-204ENST00000472129 BRD2P25440 801 aaKnown RBP9.06□□□□□ -0.96
CLTC-204ENST00000472129 ARSDP51689 593 aa9.06□□□□□ -0.96
CLTC-204ENST00000472129 SNRPNP63162 240 aaKnown RBP9.06□□□□□ -0.96
CLTC-204ENST00000472129 BHMTQ93088 406 aa9.06□□□□□ -0.96
CLTC-204ENST00000472129 GSX2Q9BZM3 304 aa9.06□□□□□ -0.96
CLTC-204ENST00000472129 ZBTB39O15060 712 aa9.05□□□□□ -0.96
CLTC-204ENST00000472129 RETREG2Q8NC44 543 aa9.05□□□□□ -0.96
CLTC-204ENST00000472129 BTBD6Q96KE9 485 aa9.05□□□□□ -0.96
CLTC-204ENST00000472129 SIN3BO75182 1162 aa9.04□□□□□ -0.96
CLTC-204ENST00000472129 HOXB4P17483 251 aaPredicted RBP9.04□□□□□ -0.96
CLTC-204ENST00000472129 AMPD1P23109 780 aa9.04□□□□□ -0.96
CLTC-204ENST00000472129 RGL4Q8IZJ4 473 aa9.04□□□□□ -0.96
CLTC-204ENST00000472129 RTCBQ9Y3I0 505 aaKnown RBP9.04□□□□□ -0.96
CLTC-204ENST00000472129 EPB42P16452 691 aa9.03□□□□□ -0.96
CLTC-204ENST00000472129 CCINQ13939 588 aa9.03□□□□□ -0.96
CLTC-204ENST00000472129 MDFIQ99750 246 aa9.03□□□□□ -0.96
CLTC-204ENST00000472129 RRAGCQ9HB90 399 aa9.03□□□□□ -0.96
CLTC-204ENST00000472129 STIM2Q9P246 746 aa9.03□□□□□ -0.96
CLTC-204ENST00000472129 USTQ9Y2C2 406 aa9.03□□□□□ -0.96
CLTC-204ENST00000472129 NFKB1P19838 968 aa9.02□□□□□ -0.97
CLTC-204ENST00000472129 NEUROD1Q13562 356 aa9.02□□□□□ -0.97
CLTC-204ENST00000472129 CHSY3Q70JA7 882 aa9.02□□□□□ -0.97
CLTC-204ENST00000472129 KRT25Q7Z3Z0 450 aa9.02□□□□□ -0.97
CLTC-204ENST00000472129 CMTR1Q8N1G2 835 aaKnown RBP9.02□□□□□ -0.97
CLTC-204ENST00000472129 GTF3C2Q8WUA4 911 aaPredicted RBP9.02□□□□□ -0.97
CLTC-204ENST00000472129 IGFLR1Q9H665 355 aa9.02□□□□□ -0.97
CLTC-204ENST00000472129 ELOA3CA0A087WX78 387 aaPredicted RBP9.01□□□□□ -0.97
CLTC-204ENST00000472129 ELOA3DA6NLF2 546 aaPredicted RBP9.01□□□□□ -0.97
CLTC-204ENST00000472129 SASH3O75995 380 aa9.01□□□□□ -0.97
CLTC-204ENST00000472129 TARSP26639 723 aaKnown RBP9.01□□□□□ -0.97
CLTC-204ENST00000472129 MTMR3Q13615 1198 aa9.01□□□□□ -0.97
CLTC-204ENST00000472129 ELOA3BQ3SY89 546 aa9.01□□□□□ -0.97
CLTC-204ENST00000472129 XP32Q5T750 250 aa9.01□□□□□ -0.97
CLTC-204ENST00000472129 ELOA3Q8NG57 546 aa9.01□□□□□ -0.97
CLTC-204ENST00000472129 TNFRSF25Q93038 417 aa9.01□□□□□ -0.97
CLTC-204ENST00000472129 PNMA5Q96PV4 448 aa9.01□□□□□ -0.97
CLTC-204ENST00000472129 ZFATQ9P243 1243 aa9.01□□□□□ -0.97
CLTC-204ENST00000472129 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.01□□□□□ -0.97
CLTC-204ENST00000472129 KCNMB2Q9Y691 235 aa9.01□□□□□ -0.97
CLTC-204ENST00000472129 TBC1D8BQ0IIM8 1120 aa9□□□□□ -0.97
CLTC-204ENST00000472129 ADARB2-AS1A8MUL3 147 aa8.99□□□□□ -0.97
CLTC-204ENST00000472129 ZAP70P43403 619 aa8.99□□□□□ -0.97
CLTC-204ENST00000472129 ATCAYQ86WG3 371 aa8.99□□□□□ -0.97
CLTC-204ENST00000472129 HELQQ8TDG4 1101 aa8.99□□□□□ -0.97
CLTC-204ENST00000472129 KRBA1A5PL33 1030 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms