RNA–Protein interactions for RNA: ENST00000471880.5

SSR4-208, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 5

Gene SSR4, Length 785 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-208ENST00000471880 ANKRD13DQ6ZTN6 518 aa19.09■□□□□ 0.65
SSR4-208ENST00000471880 RIC3Q7Z5B4 369 aa19.09■□□□□ 0.65
SSR4-208ENST00000471880 TSPYL6Q8N831 410 aa19.09■□□□□ 0.65
SSR4-208ENST00000471880 TAF1P21675 1872 aa19.09■□□□□ 0.65
SSR4-208ENST00000471880 STK31Q9BXU1 1019 aa19.08■□□□□ 0.64
SSR4-208ENST00000471880 CHMP4AQ9BY43 222 aa19.08■□□□□ 0.64
SSR4-208ENST00000471880 IL16Q14005 1332 aa19.07■□□□□ 0.64
SSR4-208ENST00000471880 ATP5J2-PTCD1G3V325 749 aa19.07■□□□□ 0.64
SSR4-208ENST00000471880 NTSR2O95665 410 aa19.07■□□□□ 0.64
SSR4-208ENST00000471880 TCIRG1Q13488 830 aa19.07■□□□□ 0.64
SSR4-208ENST00000471880 TWISTNBQ3B726 338 aaPredicted RBP19.07■□□□□ 0.64
SSR4-208ENST00000471880 PLBD2Q8NHP8 589 aa19.07■□□□□ 0.64
SSR4-208ENST00000471880 PHAXQ9H814 394 aaKnown RBP19.07■□□□□ 0.64
SSR4-208ENST00000471880 TRMT112Q9UI30 125 aaKnown RBP19.07■□□□□ 0.64
SSR4-208ENST00000471880 KLRG2A4D1S0 409 aaPredicted RBP19.06■□□□□ 0.64
SSR4-208ENST00000471880 C1QTNF8P60827 252 aa19.06■□□□□ 0.64
SSR4-208ENST00000471880 WDR63Q8IWG1 891 aa19.06■□□□□ 0.64
SSR4-208ENST00000471880 FANCIQ9NVI1 1328 aa19.05■□□□□ 0.64
SSR4-208ENST00000471880 KIF3CO14782 793 aa19.05■□□□□ 0.64
SSR4-208ENST00000471880 SLC51AQ86UW1 340 aa19.05■□□□□ 0.64
SSR4-208ENST00000471880 NLRP10Q86W26 655 aa19.05■□□□□ 0.64
SSR4-208ENST00000471880 DDX60Q8IY21 1712 aaKnown RBP19.05■□□□□ 0.64
SSR4-208ENST00000471880 IBTKQ9P2D0 1353 aaPredicted RBP19.05■□□□□ 0.64
SSR4-208ENST00000471880 DDX58O95786 925 aaKnown RBP19.04■□□□□ 0.64
SSR4-208ENST00000471880 LMNB1P20700 586 aa19.04■□□□□ 0.64
SSR4-208ENST00000471880 ALDH1B1P30837 517 aa19.04■□□□□ 0.64
SSR4-208ENST00000471880 RTL5Q5HYW3 569 aaPredicted RBP19.04■□□□□ 0.64
SSR4-208ENST00000471880 SOGA3Q5TF21 947 aa19.04■□□□□ 0.64
SSR4-208ENST00000471880 OLFM4Q6UX06 510 aa19.04■□□□□ 0.64
SSR4-208ENST00000471880 C3orf67Q6ZVT6 689 aa19.04■□□□□ 0.64
SSR4-208ENST00000471880 NLRP3Q96P20 1036 aa19.04■□□□□ 0.64
SSR4-208ENST00000471880 HCLS1P14317 486 aaPredicted RBP19.03■□□□□ 0.64
SSR4-208ENST00000471880 NCBP3Q53F19 620 aaKnown RBP19.03■□□□□ 0.64
SSR4-208ENST00000471880 C7orf43Q8WVR3 580 aa19.03■□□□□ 0.64
SSR4-208ENST00000471880 MYD88Q99836 296 aa19.03■□□□□ 0.64
SSR4-208ENST00000471880 MYH16Q9H6N6 1097 aa19.03■□□□□ 0.64
SSR4-208ENST00000471880 NMRK2Q9NPI5 230 aa19.03■□□□□ 0.64
SSR4-208ENST00000471880 SH3TC1Q8TE82 1336 aa19.02■□□□□ 0.64
SSR4-208ENST00000471880 EXOSC9Q06265 439 aaKnown RBP19.02■□□□□ 0.64
SSR4-208ENST00000471880 CCDC93Q567U6 631 aa19.02■□□□□ 0.64
SSR4-208ENST00000471880 SYNE4Q8N205 404 aa19.02■□□□□ 0.64
SSR4-208ENST00000471880 RBM17Q96I25 401 aaKnown RBP19.02■□□□□ 0.64
SSR4-208ENST00000471880 TAOK3Q9H2K8 898 aa19.02■□□□□ 0.64
SSR4-208ENST00000471880 RIC1Q4ADV7 1423 aa19.01■□□□□ 0.63
SSR4-208ENST00000471880 SNED1Q8TER0 1413 aa19■□□□□ 0.63
SSR4-208ENST00000471880 CRY2Q49AN0 593 aa19■□□□□ 0.63
SSR4-208ENST00000471880 FAM89AQ96GI7 184 aa19■□□□□ 0.63
SSR4-208ENST00000471880 TMX4Q9H1E5 349 aaPredicted RBP19■□□□□ 0.63
SSR4-208ENST00000471880 COL4A1P02462 1669 aa19■□□□□ 0.63
SSR4-208ENST00000471880 SLC4A2P04920 1241 aa18.99■□□□□ 0.63
SSR4-208ENST00000471880 SPINK5Q9NQ38 1064 aaPredicted RBP18.99■□□□□ 0.63
SSR4-208ENST00000471880 MAP3K2Q9Y2U5 619 aa18.99■□□□□ 0.63
SSR4-208ENST00000471880 RNF123Q5XPI4 1314 aa18.99■□□□□ 0.63
SSR4-208ENST00000471880 KDM2BQ8NHM5 1336 aa18.99■□□□□ 0.63
SSR4-208ENST00000471880 PPEF1O14829 653 aaPredicted RBP18.98■□□□□ 0.63
SSR4-208ENST00000471880 DIEXFQ68CQ4 756 aaKnown RBP18.98■□□□□ 0.63
SSR4-208ENST00000471880 ISCA1Q9BUE6 129 aa18.98■□□□□ 0.63
SSR4-208ENST00000471880 CCER2I3L3R5 266 aa18.97■□□□□ 0.63
SSR4-208ENST00000471880 DDX46Q7L014 1031 aaKnown RBP18.97■□□□□ 0.63
SSR4-208ENST00000471880 C16orf71Q8IYS4 520 aaPredicted RBP18.97■□□□□ 0.63
SSR4-208ENST00000471880 COL4A5P29400 1685 aa18.96■□□□□ 0.63
SSR4-208ENST00000471880 CACNA1FO60840 1977 aa18.96■□□□□ 0.63
SSR4-208ENST00000471880 PI4KAP2A4QPH2 592 aa18.96■□□□□ 0.63
SSR4-208ENST00000471880 NEXNQ0ZGT2 675 aa18.96■□□□□ 0.63
SSR4-208ENST00000471880 SLC10A5Q5PT55 438 aa18.96■□□□□ 0.63
SSR4-208ENST00000471880 G2E3Q7L622 706 aa18.96■□□□□ 0.63
SSR4-208ENST00000471880 RTKN2Q8IZC4 609 aa18.96■□□□□ 0.63
SSR4-208ENST00000471880 PI4KAP1Q8N8J0 262 aa18.96■□□□□ 0.63
SSR4-208ENST00000471880 LTBP3Q9NS15 1303 aa18.96■□□□□ 0.63
SSR4-208ENST00000471880 IRS4O14654 1257 aaPredicted RBP18.95■□□□□ 0.62
SSR4-208ENST00000471880 HOXA10P31260 410 aaPredicted RBP18.95■□□□□ 0.62
SSR4-208ENST00000471880 FKBP4Q02790 459 aaKnown RBP eCLIP18.95■□□□□ 0.62
SSR4-208ENST00000471880 FKBP5Q13451 457 aaPredicted RBP18.95■□□□□ 0.62
SSR4-208ENST00000471880 JARID2Q92833 1246 aaPredicted RBP18.95■□□□□ 0.62
SSR4-208ENST00000471880 CRAMP1Q96RY5 1269 aa18.95■□□□□ 0.62
SSR4-208ENST00000471880 METTL22Q9BUU2 404 aaPredicted RBP18.95■□□□□ 0.62
SSR4-208ENST00000471880 ZNF277Q9NRM2 450 aaPredicted RBP18.95■□□□□ 0.62
SSR4-208ENST00000471880 CWC25Q9NXE8 425 aaPredicted RBP18.95■□□□□ 0.62
SSR4-208ENST00000471880 ABCC4O15439 1325 aa18.95■□□□□ 0.62
SSR4-208ENST00000471880 KSR2Q6VAB6 950 aa18.94■□□□□ 0.62
SSR4-208ENST00000471880 WDR90Q96KV7 1748 aa18.94■□□□□ 0.62
SSR4-208ENST00000471880 VAMP4O75379 141 aa18.93■□□□□ 0.62
SSR4-208ENST00000471880 FLIIQ13045 1269 aa18.93■□□□□ 0.62
SSR4-208ENST00000471880 DPY19L2Q6NUT2 758 aa18.93■□□□□ 0.62
SSR4-208ENST00000471880 RRAGCQ9HB90 399 aa18.93■□□□□ 0.62
SSR4-208ENST00000471880 CCDC191Q8NCU4 936 aa18.92■□□□□ 0.62
SSR4-208ENST00000471880 ZC3H4Q9UPT8 1303 aaKnown RBP18.92■□□□□ 0.62
SSR4-208ENST00000471880 CEP350Q5VT06 3117 aa18.91■□□□□ 0.62
SSR4-208ENST00000471880 TRIM28Q13263 835 aaKnown RBP18.91■□□□□ 0.62
SSR4-208ENST00000471880 CC2D2BQ6DHV5 1058 aa18.91■□□□□ 0.62
SSR4-208ENST00000471880 MIER1Q8N108 512 aa18.91■□□□□ 0.62
SSR4-208ENST00000471880 ZBTB38Q8NAP3 1195 aaPredicted RBP18.91■□□□□ 0.62
SSR4-208ENST00000471880 CCDC85AQ96PX6 553 aaPredicted RBP18.91■□□□□ 0.62
SSR4-208ENST00000471880 LRRC37AA6NMS7 1700 aa18.91■□□□□ 0.62
SSR4-208ENST00000471880 GLTPD2A6NH11 291 aa18.9■□□□□ 0.62
SSR4-208ENST00000471880 HSP90B1P14625 803 aaKnown RBP18.9■□□□□ 0.62
SSR4-208ENST00000471880 IARSP41252 1262 aaKnown RBP18.9■□□□□ 0.62
SSR4-208ENST00000471880 CWF19L2Q2TBE0 894 aaKnown RBP18.9■□□□□ 0.62
SSR4-208ENST00000471880 POTECB2RU33 542 aa18.89■□□□□ 0.61
SSR4-208ENST00000471880 E9PSI1 815 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms