RNA–Protein interactions for RNA: ENST00000471704.1

COMMD1-207, Transcript of copper metabolism domain containing 1, humanhuman

TSL 1 (best)

Gene COMMD1, Length 604 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-207ENST00000471704 NECTIN2Q92692 538 aa24.59■■□□□ 1.53
COMMD1-207ENST00000471704 SNED1Q8TER0 1413 aa24.59■■□□□ 1.53
COMMD1-207ENST00000471704 CFAP44Q96MT7 982 aa24.58■■□□□ 1.53
COMMD1-207ENST00000471704 DDNO94850 711 aaPredicted RBP24.57■■□□□ 1.52
COMMD1-207ENST00000471704 NTSR2O95665 410 aa24.57■■□□□ 1.52
COMMD1-207ENST00000471704 ZNF853P0CG23 659 aa24.57■■□□□ 1.52
COMMD1-207ENST00000471704 KLRG1Q96E93 195 aa24.57■■□□□ 1.52
COMMD1-207ENST00000471704 ZNF277Q9NRM2 450 aaPredicted RBP24.56■■□□□ 1.52
COMMD1-207ENST00000471704 MBIPQ9NS73 344 aa24.56■■□□□ 1.52
COMMD1-207ENST00000471704 LAMB2P55268 1798 aa24.56■■□□□ 1.52
COMMD1-207ENST00000471704 PARP10Q53GL7 1025 aa24.55■■□□□ 1.52
COMMD1-207ENST00000471704 PCNTO95613 3336 aa24.55■■□□□ 1.52
COMMD1-207ENST00000471704 L3MBTL3Q96JM7 780 aaPredicted RBP24.54■■□□□ 1.52
COMMD1-207ENST00000471704 SLC10A5Q5PT55 438 aa24.53■■□□□ 1.52
COMMD1-207ENST00000471704 CC2D2BQ6DHV5 1058 aa24.53■■□□□ 1.52
COMMD1-207ENST00000471704 PPP1R42Q7Z4L9 355 aa24.53■■□□□ 1.52
COMMD1-207ENST00000471704 SYNE4Q8N205 404 aa24.53■■□□□ 1.52
COMMD1-207ENST00000471704 JMYQ8N9B5 988 aa24.53■■□□□ 1.52
COMMD1-207ENST00000471704 CRAMP1Q96RY5 1269 aa24.53■■□□□ 1.52
COMMD1-207ENST00000471704 SCN4AP35499 1836 aa24.53■■□□□ 1.52
COMMD1-207ENST00000471704 C3orf67Q6ZVT6 689 aa24.52■■□□□ 1.52
COMMD1-207ENST00000471704 COPS6Q7L5N1 327 aa24.52■■□□□ 1.52
COMMD1-207ENST00000471704 RPGRQ92834 1020 aaKnown RBP24.52■■□□□ 1.52
COMMD1-207ENST00000471704 PSMD1Q99460 953 aa24.52■■□□□ 1.52
COMMD1-207ENST00000471704 DDX21Q9NR30 783 aaKnown RBP eCLIP24.52■■□□□ 1.52
COMMD1-207ENST00000471704 CHPF2Q9P2E5 772 aa24.52■■□□□ 1.52
COMMD1-207ENST00000471704 HOXB7P09629 217 aa24.51■■□□□ 1.51
COMMD1-207ENST00000471704 IARSP41252 1262 aaKnown RBP24.51■■□□□ 1.51
COMMD1-207ENST00000471704 XAGE3Q8WTP9 111 aa24.51■■□□□ 1.51
COMMD1-207ENST00000471704 IFT57Q9NWB7 429 aa24.51■■□□□ 1.51
COMMD1-207ENST00000471704 FZD9O00144 591 aa24.5■■□□□ 1.51
COMMD1-207ENST00000471704 ANP32CO43423 234 aa24.5■■□□□ 1.51
COMMD1-207ENST00000471704 IFFO2Q5TF58 517 aa24.5■■□□□ 1.51
COMMD1-207ENST00000471704 HDGFL1Q5TGJ6 251 aa24.5■■□□□ 1.51
COMMD1-207ENST00000471704 RBM17Q96I25 401 aaKnown RBP24.5■■□□□ 1.51
COMMD1-207ENST00000471704 UTP14AQ9BVJ6 771 aaKnown RBP24.5■■□□□ 1.51
COMMD1-207ENST00000471704 ZNF541Q9H0D2 1346 aa24.5■■□□□ 1.51
COMMD1-207ENST00000471704 AIMP1Q12904 312 aaKnown RBP24.49■■□□□ 1.51
COMMD1-207ENST00000471704 GRIPAP1Q4V328 841 aa24.49■■□□□ 1.51
COMMD1-207ENST00000471704 DUSP27Q5VZP5 1158 aa24.49■■□□□ 1.51
COMMD1-207ENST00000471704 IQCA1LA6NCM1 817 aa24.48■■□□□ 1.51
COMMD1-207ENST00000471704 POTEIP0CG38 1075 aa24.48■■□□□ 1.51
COMMD1-207ENST00000471704 POTEJP0CG39 1038 aa24.48■■□□□ 1.51
COMMD1-207ENST00000471704 RNF123Q5XPI4 1314 aa24.48■■□□□ 1.51
COMMD1-207ENST00000471704 CHADLQ6NUI6 762 aa24.48■■□□□ 1.51
COMMD1-207ENST00000471704 NLRP3Q96P20 1036 aa24.48■■□□□ 1.51
COMMD1-207ENST00000471704 MRS2Q9HD23 443 aa24.48■■□□□ 1.51
COMMD1-207ENST00000471704 DDX60Q8IY21 1712 aaKnown RBP24.47■■□□□ 1.51
COMMD1-207ENST00000471704 GNAI1P63096 354 aa24.47■■□□□ 1.51
COMMD1-207ENST00000471704 TCIRG1Q13488 830 aa24.47■■□□□ 1.51
COMMD1-207ENST00000471704 HSP90AB3PQ58FF7 597 aa24.47■■□□□ 1.51
COMMD1-207ENST00000471704 NLRP10Q86W26 655 aa24.47■■□□□ 1.51
COMMD1-207ENST00000471704 TAF1DQ9H5J8 278 aaPredicted RBP24.47■■□□□ 1.51
COMMD1-207ENST00000471704 SLC51AQ86UW1 340 aa24.46■■□□□ 1.51
COMMD1-207ENST00000471704 COL4A5P29400 1685 aa24.46■■□□□ 1.51
COMMD1-207ENST00000471704 PPEF1O14829 653 aaPredicted RBP24.45■■□□□ 1.5
COMMD1-207ENST00000471704 CALD1Q05682 793 aaKnown RBP24.44■■□□□ 1.5
COMMD1-207ENST00000471704 C8orf58Q8NAV2 365 aa24.44■■□□□ 1.5
COMMD1-207ENST00000471704 DBF4Q9UBU7 674 aaPredicted RBP24.44■■□□□ 1.5
COMMD1-207ENST00000471704 CCDC27Q2M243 656 aa24.43■■□□□ 1.5
COMMD1-207ENST00000471704 LDHDQ86WU2 507 aa24.43■■□□□ 1.5
COMMD1-207ENST00000471704 JDP2Q8WYK2 163 aa24.43■■□□□ 1.5
COMMD1-207ENST00000471704 ATP6V0A2Q9Y487 856 aa24.43■■□□□ 1.5
COMMD1-207ENST00000471704 TAF1P21675 1872 aa24.43■■□□□ 1.5
COMMD1-207ENST00000471704 ELL2O00472 640 aaPredicted RBP24.42■■□□□ 1.5
COMMD1-207ENST00000471704 WWC1Q8IX03 1113 aa24.42■■□□□ 1.5
COMMD1-207ENST00000471704 GPC2Q8N158 579 aa24.42■■□□□ 1.5
COMMD1-207ENST00000471704 HACL1Q9UJ83 578 aa24.42■■□□□ 1.5
COMMD1-207ENST00000471704 ADAMTSL1Q8N6G6 1762 aa24.42■■□□□ 1.5
COMMD1-207ENST00000471704 PLBD2Q8NHP8 589 aa24.41■■□□□ 1.5
COMMD1-207ENST00000471704 ABCC4O15439 1325 aa24.4■■□□□ 1.5
COMMD1-207ENST00000471704 TCERG1O14776 1098 aaKnown RBP24.4■■□□□ 1.5
COMMD1-207ENST00000471704 HCLS1P14317 486 aaPredicted RBP24.4■■□□□ 1.5
COMMD1-207ENST00000471704 ANKRD13DQ6ZTN6 518 aa24.4■■□□□ 1.5
COMMD1-207ENST00000471704 TSPYL6Q8N831 410 aa24.4■■□□□ 1.5
COMMD1-207ENST00000471704 TSR2Q969E8 191 aaKnown RBP24.4■■□□□ 1.5
COMMD1-207ENST00000471704 TRMT112Q9UI30 125 aaKnown RBP24.4■■□□□ 1.5
COMMD1-207ENST00000471704 SH3TC1Q8TE82 1336 aa24.39■■□□□ 1.5
COMMD1-207ENST00000471704 PASKQ96RG2 1323 aa24.39■■□□□ 1.5
COMMD1-207ENST00000471704 BBOX1O75936 387 aa24.39■■□□□ 1.49
COMMD1-207ENST00000471704 EPHX2P34913 555 aa24.39■■□□□ 1.49
COMMD1-207ENST00000471704 ISCA1Q9BUE6 129 aa24.39■■□□□ 1.49
COMMD1-207ENST00000471704 PHAXQ9H814 394 aaKnown RBP24.39■■□□□ 1.49
COMMD1-207ENST00000471704 HYPKQ9NX55 129 aa24.39■■□□□ 1.49
COMMD1-207ENST00000471704 ITGBL1O95965 494 aaPredicted RBP24.38■■□□□ 1.49
COMMD1-207ENST00000471704 ZNF428Q96B54 188 aa24.38■■□□□ 1.49
COMMD1-207ENST00000471704 VPS33BQ9H267 617 aa24.38■■□□□ 1.49
COMMD1-207ENST00000471704 CREBZFQ9NS37 354 aa24.38■■□□□ 1.49
COMMD1-207ENST00000471704 EIF6P56537 245 aaKnown RBP24.37■■□□□ 1.49
COMMD1-207ENST00000471704 SP8Q8IXZ3 490 aa24.37■■□□□ 1.49
COMMD1-207ENST00000471704 LARGE2Q8N3Y3 721 aa24.37■■□□□ 1.49
COMMD1-207ENST00000471704 RTFDC1Q9BY42 306 aaPredicted RBP24.37■■□□□ 1.49
COMMD1-207ENST00000471704 NCBP3Q53F19 620 aaKnown RBP24.36■■□□□ 1.49
COMMD1-207ENST00000471704 PNMA8AQ86V59 439 aaPredicted RBP24.36■■□□□ 1.49
COMMD1-207ENST00000471704 COL4A1P02462 1669 aa24.36■■□□□ 1.49
COMMD1-207ENST00000471704 LTBP1Q14766 1721 aa24.35■■□□□ 1.49
COMMD1-207ENST00000471704 TRIM28Q13263 835 aaKnown RBP24.35■■□□□ 1.49
COMMD1-207ENST00000471704 EAPPQ56P03 285 aaPredicted RBP24.35■■□□□ 1.49
COMMD1-207ENST00000471704 DDX46Q7L014 1031 aaKnown RBP24.34■■□□□ 1.49
COMMD1-207ENST00000471704 TMX4Q9H1E5 349 aaPredicted RBP24.34■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms