RNA–Protein interactions for RNA: ENST00000471660.5

CHMP2B-203, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 2 BASIC

Gene CHMP2B, Length 2,528 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-203ENST00000471660 H2AFXP16104 143 aaPredicted RBP12.78□□□□□ -0.36
CHMP2B-203ENST00000471660 IQUBQ8NA54 791 aa12.78□□□□□ -0.36
CHMP2B-203ENST00000471660 USP54Q70EL1 1684 aa12.78□□□□□ -0.36
CHMP2B-203ENST00000471660 DIAPH1O60610 1272 aaKnown RBP12.78□□□□□ -0.36
CHMP2B-203ENST00000471660 CAPN15O75808 1086 aa12.78□□□□□ -0.36
CHMP2B-203ENST00000471660 GSCP56915 257 aaPredicted RBP12.78□□□□□ -0.36
CHMP2B-203ENST00000471660 TPM4P67936 248 aa12.78□□□□□ -0.36
CHMP2B-203ENST00000471660 NBPF20Q3BBV1 942 aa12.78□□□□□ -0.36
CHMP2B-203ENST00000471660 SWT1Q5T5J6 900 aaKnown RBP12.78□□□□□ -0.36
CHMP2B-203ENST00000471660 SRLQ86TD4 932 aa12.78□□□□□ -0.36
CHMP2B-203ENST00000471660 FUCA2Q9BTY2 467 aa12.78□□□□□ -0.36
CHMP2B-203ENST00000471660 FHOD1Q9Y613 1164 aa12.78□□□□□ -0.36
CHMP2B-203ENST00000471660 CRYBG1Q9Y4K1 1723 aa12.77□□□□□ -0.36
CHMP2B-203ENST00000471660 HTATSF1O43719 755 aaKnown RBP12.77□□□□□ -0.37
CHMP2B-203ENST00000471660 HCLS1P14317 486 aaPredicted RBP12.77□□□□□ -0.37
CHMP2B-203ENST00000471660 ATP2B1P20020 1258 aa12.77□□□□□ -0.37
CHMP2B-203ENST00000471660 TSGA10IPQ3SY00 556 aa12.77□□□□□ -0.37
CHMP2B-203ENST00000471660 C10orf67Q8IYJ2 551 aa12.77□□□□□ -0.37
CHMP2B-203ENST00000471660 MNS1Q8NEH6 495 aa12.77□□□□□ -0.37
CHMP2B-203ENST00000471660 LNPKQ9C0E8 428 aa12.77□□□□□ -0.37
CHMP2B-203ENST00000471660 V9GYY5 206 aaPredicted RBP12.77□□□□□ -0.37
CHMP2B-203ENST00000471660 PLEKHG2Q9H7P9 1386 aa12.77□□□□□ -0.37
CHMP2B-203ENST00000471660 MX1P20591 662 aa12.77□□□□□ -0.37
CHMP2B-203ENST00000471660 KRBA2Q6ZNG9 492 aa12.77□□□□□ -0.37
CHMP2B-203ENST00000471660 C16orf45Q96MC5 204 aaPredicted RBP12.77□□□□□ -0.37
CHMP2B-203ENST00000471660 MED4Q9NPJ6 270 aa12.77□□□□□ -0.37
CHMP2B-203ENST00000471660 CABP1Q9NZU7 370 aa12.77□□□□□ -0.37
CHMP2B-203ENST00000471660 PATL2C9JE40 543 aaKnown RBP12.76□□□□□ -0.37
CHMP2B-203ENST00000471660 HSP90AB3PQ58FF7 597 aa12.76□□□□□ -0.37
CHMP2B-203ENST00000471660 NOM1Q5C9Z4 860 aaKnown RBP12.76□□□□□ -0.37
CHMP2B-203ENST00000471660 GCC1Q96CN9 775 aa12.76□□□□□ -0.37
CHMP2B-203ENST00000471660 PLEKHF1Q96S99 279 aa12.76□□□□□ -0.37
CHMP2B-203ENST00000471660 USP26Q9BXU7 913 aa12.76□□□□□ -0.37
CHMP2B-203ENST00000471660 ATP10DQ9P241 1426 aa12.76□□□□□ -0.37
CHMP2B-203ENST00000471660 TRIM66O15016 1216 aa12.76□□□□□ -0.37
CHMP2B-203ENST00000471660 AP5Z1O43299 807 aa12.76□□□□□ -0.37
CHMP2B-203ENST00000471660 GYS2P54840 703 aa12.76□□□□□ -0.37
CHMP2B-203ENST00000471660 GPS2Q13227 327 aa12.76□□□□□ -0.37
CHMP2B-203ENST00000471660 SUGP1Q8IWZ8 645 aaKnown RBP12.76□□□□□ -0.37
CHMP2B-203ENST00000471660 TMX1Q9H3N1 280 aa12.76□□□□□ -0.37
CHMP2B-203ENST00000471660 TTC21AQ8NDW8 1320 aa12.75□□□□□ -0.37
CHMP2B-203ENST00000471660 KIF24Q5T7B8 1368 aa12.75□□□□□ -0.37
CHMP2B-203ENST00000471660 COL24A1Q17RW2 1714 aa12.75□□□□□ -0.37
CHMP2B-203ENST00000471660 ZSCAN26Q16670 478 aa12.75□□□□□ -0.37
CHMP2B-203ENST00000471660 CCDC91Q7Z6B0 441 aa12.75□□□□□ -0.37
CHMP2B-203ENST00000471660 TNS4Q8IZW8 715 aa12.75□□□□□ -0.37
CHMP2B-203ENST00000471660 GOLGA5Q8TBA6 731 aa12.75□□□□□ -0.37
CHMP2B-203ENST00000471660 NUDT16Q96DE0 195 aaKnown RBP12.75□□□□□ -0.37
CHMP2B-203ENST00000471660 UBXN6Q9BZV1 441 aa12.75□□□□□ -0.37
CHMP2B-203ENST00000471660 ZNF215Q9UL58 517 aaPredicted RBP12.75□□□□□ -0.37
CHMP2B-203ENST00000471660 ERBB3P21860 1342 aa12.75□□□□□ -0.37
CHMP2B-203ENST00000471660 MAP2P11137 1827 aaKnown RBP12.75□□□□□ -0.37
CHMP2B-203ENST00000471660 PEAK1Q9H792 1746 aa12.75□□□□□ -0.37
CHMP2B-203ENST00000471660 CCDC171Q6TFL3 1326 aa12.75□□□□□ -0.37
CHMP2B-203ENST00000471660 U2AF1L5P0DN76 240 aaPredicted RBP12.75□□□□□ -0.37
CHMP2B-203ENST00000471660 APLP1P51693 650 aa12.75□□□□□ -0.37
CHMP2B-203ENST00000471660 U2AF1Q01081 240 aaKnown RBP eCLIP12.75□□□□□ -0.37
CHMP2B-203ENST00000471660 PSME1Q06323 249 aa12.75□□□□□ -0.37
CHMP2B-203ENST00000471660 CEP135Q66GS9 1140 aa12.75□□□□□ -0.37
CHMP2B-203ENST00000471660 SGIP1Q9BQI5 828 aa12.75□□□□□ -0.37
CHMP2B-203ENST00000471660 BCL2L13Q9BXK5 485 aa12.75□□□□□ -0.37
CHMP2B-203ENST00000471660 TRIM27P14373 513 aa12.74□□□□□ -0.37
CHMP2B-203ENST00000471660 MCCP23508 829 aa12.74□□□□□ -0.37
CHMP2B-203ENST00000471660 PLA2G4AP47712 749 aa12.74□□□□□ -0.37
CHMP2B-203ENST00000471660 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.74□□□□□ -0.37
CHMP2B-203ENST00000471660 KRT28Q7Z3Y7 464 aa12.74□□□□□ -0.37
CHMP2B-203ENST00000471660 CCDC191Q8NCU4 936 aa12.74□□□□□ -0.37
CHMP2B-203ENST00000471660 FBXO18Q8NFZ0 1043 aa12.74□□□□□ -0.37
CHMP2B-203ENST00000471660 NEK11Q8NG66 645 aa12.74□□□□□ -0.37
CHMP2B-203ENST00000471660 CHAMP1Q96JM3 812 aa12.74□□□□□ -0.37
CHMP2B-203ENST00000471660 PSD3Q9NYI0 1048 aa12.74□□□□□ -0.37
CHMP2B-203ENST00000471660 LCMT1Q9UIC8 334 aa12.74□□□□□ -0.37
CHMP2B-203ENST00000471660 LRRFIP2Q9Y608 721 aaKnown RBP12.74□□□□□ -0.37
CHMP2B-203ENST00000471660 PARP4Q9UKK3 1724 aaKnown RBP12.74□□□□□ -0.37
CHMP2B-203ENST00000471660 SBF2Q86WG5 1849 aa12.74□□□□□ -0.37
CHMP2B-203ENST00000471660 ATP8B1O43520 1251 aa12.73□□□□□ -0.37
CHMP2B-203ENST00000471660 TTC31Q49AM3 519 aaPredicted RBP12.73□□□□□ -0.37
CHMP2B-203ENST00000471660 RRP15Q9Y3B9 282 aaKnown RBP12.73□□□□□ -0.37
CHMP2B-203ENST00000471660 TRPM3Q9HCF6 1732 aaPredicted RBP12.73□□□□□ -0.37
CHMP2B-203ENST00000471660 PNMA6AP0CW24 399 aaPredicted RBP12.73□□□□□ -0.37
CHMP2B-203ENST00000471660 PTGS1P23219 599 aa12.73□□□□□ -0.37
CHMP2B-203ENST00000471660 MAGEA9P43362 315 aa12.73□□□□□ -0.37
CHMP2B-203ENST00000471660 ELF2Q15723 593 aa12.73□□□□□ -0.37
CHMP2B-203ENST00000471660 GPR162Q16538 588 aa12.73□□□□□ -0.37
CHMP2B-203ENST00000471660 EP400NLQ6ZTU2 488 aa12.73□□□□□ -0.37
CHMP2B-203ENST00000471660 INTS4Q96HW7 963 aaKnown RBP12.73□□□□□ -0.37
CHMP2B-203ENST00000471660 DEF6Q9H4E7 631 aa12.73□□□□□ -0.37
CHMP2B-203ENST00000471660 CXorf56Q9H5V9 222 aa12.73□□□□□ -0.37
CHMP2B-203ENST00000471660 BTG4Q9NY30 223 aa12.73□□□□□ -0.37
CHMP2B-203ENST00000471660 ALS2Q96Q42 1657 aa12.73□□□□□ -0.37
CHMP2B-203ENST00000471660 ZBTB7AO95365 584 aa12.72□□□□□ -0.37
CHMP2B-203ENST00000471660 MCM2P49736 904 aa12.72□□□□□ -0.37
CHMP2B-203ENST00000471660 CUL4AQ13619 759 aa12.72□□□□□ -0.37
CHMP2B-203ENST00000471660 ATF7IPQ6VMQ6 1270 aa12.72□□□□□ -0.37
CHMP2B-203ENST00000471660 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.72□□□□□ -0.37
CHMP2B-203ENST00000471660 MTFR1LQ9H019 292 aa12.72□□□□□ -0.37
CHMP2B-203ENST00000471660 IFT57Q9NWB7 429 aa12.72□□□□□ -0.37
CHMP2B-203ENST00000471660 RAI14Q9P0K7 980 aa12.72□□□□□ -0.37
CHMP2B-203ENST00000471660 SPATA31A1Q5TZJ5 1347 aa12.72□□□□□ -0.37
CHMP2B-203ENST00000471660 GADD45BO75293 160 aaPredicted RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms