RNA–Protein interactions for RNA: ENST00000471640.1

NCKAP1-203, Transcript of NCK associated protein 1, humanhuman

TSL 5

Gene NCKAP1, Length 306 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-203ENST00000471640 FOXD4L6Q3SYB3 417 aaPredicted RBP4.91□□□□□ -1.62
NCKAP1-203ENST00000471640 FOXD4L3Q6VB84 417 aaPredicted RBP4.91□□□□□ -1.62
NCKAP1-203ENST00000471640 SCG3Q8WXD2 468 aaKnown RBP4.91□□□□□ -1.62
NCKAP1-203ENST00000471640 ARXQ96QS3 562 aa4.91□□□□□ -1.62
NCKAP1-203ENST00000471640 HINFPQ9BQA5 517 aa4.91□□□□□ -1.62
NCKAP1-203ENST00000471640 C2orf49Q9BVC5 232 aaPredicted RBP4.91□□□□□ -1.62
NCKAP1-203ENST00000471640 PLVAPQ9BX97 442 aa4.91□□□□□ -1.62
NCKAP1-203ENST00000471640 ANKIB1Q9P2G1 1089 aa4.91□□□□□ -1.62
NCKAP1-203ENST00000471640 SERPINA10Q9UK55 444 aa4.91□□□□□ -1.62
NCKAP1-203ENST00000471640 DCDC2BA2VCK2 349 aa4.9□□□□□ -1.63
NCKAP1-203ENST00000471640 EFSO43281 561 aa4.9□□□□□ -1.63
NCKAP1-203ENST00000471640 YBX3P16989 372 aaKnown RBP eCLIP4.9□□□□□ -1.63
NCKAP1-203ENST00000471640 CTBSQ01459 385 aa4.9□□□□□ -1.63
NCKAP1-203ENST00000471640 ELOAQ14241 798 aaKnown RBP4.9□□□□□ -1.63
NCKAP1-203ENST00000471640 PRSS36Q5K4E3 855 aa4.9□□□□□ -1.63
NCKAP1-203ENST00000471640 SH3PXD2AQ5TCZ1 1133 aa4.9□□□□□ -1.63
NCKAP1-203ENST00000471640 FAM200AQ8TCP9 573 aa4.9□□□□□ -1.63
NCKAP1-203ENST00000471640 C7orf43Q8WVR3 580 aa4.9□□□□□ -1.63
NCKAP1-203ENST00000471640 PHACTR1Q9C0D0 580 aa4.9□□□□□ -1.63
NCKAP1-203ENST00000471640 TPSG1Q9NRR2 321 aa4.9□□□□□ -1.63
NCKAP1-203ENST00000471640 NEURL1BA8MQ27 555 aa4.89□□□□□ -1.63
NCKAP1-203ENST00000471640 KHNYNO15037 678 aaKnown RBP4.89□□□□□ -1.63
NCKAP1-203ENST00000471640 PAX4O43316 350 aa4.89□□□□□ -1.63
NCKAP1-203ENST00000471640 FOXO3O43524 673 aa4.89□□□□□ -1.63
NCKAP1-203ENST00000471640 ALAS2P22557 587 aa4.89□□□□□ -1.63
NCKAP1-203ENST00000471640 SWI5Q1ZZU3 235 aa4.89□□□□□ -1.63
NCKAP1-203ENST00000471640 LRRC69Q6ZNQ3 347 aa4.89□□□□□ -1.63
NCKAP1-203ENST00000471640 ALDH16A1Q8IZ83 802 aa4.89□□□□□ -1.63
NCKAP1-203ENST00000471640 MARK1Q9P0L2 795 aa4.89□□□□□ -1.63
NCKAP1-203ENST00000471640 NOVA2Q9UNW9 492 aaKnown RBP4.89□□□□□ -1.63
NCKAP1-203ENST00000471640 HCN4Q9Y3Q4 1203 aa4.89□□□□□ -1.63
NCKAP1-203ENST00000471640 ATG7O95352 703 aa4.88□□□□□ -1.63
NCKAP1-203ENST00000471640 WEE1P30291 646 aa4.88□□□□□ -1.63
NCKAP1-203ENST00000471640 SRPK2P78362 688 aaKnown RBP4.88□□□□□ -1.63
NCKAP1-203ENST00000471640 RTN1Q16799 776 aa4.88□□□□□ -1.63
NCKAP1-203ENST00000471640 ERICH6Q7L0X2 663 aa4.88□□□□□ -1.63
NCKAP1-203ENST00000471640 CHMP7Q8WUX9 453 aaPredicted RBP4.88□□□□□ -1.63
NCKAP1-203ENST00000471640 ACIN1Q9UKV3 1341 aaKnown RBP4.88□□□□□ -1.63
NCKAP1-203ENST00000471640 HYAL3O43820 417 aaPredicted RBP4.87□□□□□ -1.63
NCKAP1-203ENST00000471640 COBLO75128 1261 aa4.87□□□□□ -1.63
NCKAP1-203ENST00000471640 CD33P20138 364 aa4.87□□□□□ -1.63
NCKAP1-203ENST00000471640 CDCA8Q53HL2 280 aa4.87□□□□□ -1.63
NCKAP1-203ENST00000471640 IER5Q5VY09 327 aa4.87□□□□□ -1.63
NCKAP1-203ENST00000471640 C14orf37Q86TY3 774 aa4.87□□□□□ -1.63
NCKAP1-203ENST00000471640 VTI1AQ96AJ9 217 aa4.87□□□□□ -1.63
NCKAP1-203ENST00000471640 PBXIP1Q96AQ6 731 aa4.87□□□□□ -1.63
NCKAP1-203ENST00000471640 TRIM11Q96F44 468 aa4.87□□□□□ -1.63
NCKAP1-203ENST00000471640 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.87□□□□□ -1.63
NCKAP1-203ENST00000471640 ZMIZ1Q9ULJ6 1067 aa4.87□□□□□ -1.63
NCKAP1-203ENST00000471640 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP4.86□□□□□ -1.63
NCKAP1-203ENST00000471640 C9orf172C9J069 976 aa4.86□□□□□ -1.63
NCKAP1-203ENST00000471640 TGFBR3LH3BV60 316 aa4.86□□□□□ -1.63
NCKAP1-203ENST00000471640 KCNQ4P56696 695 aa4.86□□□□□ -1.63
NCKAP1-203ENST00000471640 TYRO3Q06418 890 aa4.86□□□□□ -1.63
NCKAP1-203ENST00000471640 ZNF468Q5VIY5 522 aaPredicted RBP4.86□□□□□ -1.63
NCKAP1-203ENST00000471640 SLC51AQ86UW1 340 aa4.86□□□□□ -1.63
NCKAP1-203ENST00000471640 NGLY1Q96IV0 654 aa4.86□□□□□ -1.63
NCKAP1-203ENST00000471640 HSH2DQ96JZ2 352 aa4.86□□□□□ -1.63
NCKAP1-203ENST00000471640 SUSD3Q96L08 255 aa4.86□□□□□ -1.63
NCKAP1-203ENST00000471640 PRDM6Q9NQX0 595 aa4.86□□□□□ -1.63
NCKAP1-203ENST00000471640 PRR12Q9ULL5 1215 aa4.86□□□□□ -1.63
NCKAP1-203ENST00000471640 COL17A1Q9UMD9 1497 aaPredicted RBP4.86□□□□□ -1.63
NCKAP1-203ENST00000471640 TRIM28Q13263 835 aaKnown RBP4.85□□□□□ -1.63
NCKAP1-203ENST00000471640 NEUROD1Q13562 356 aa4.85□□□□□ -1.63
NCKAP1-203ENST00000471640 MCTP1Q6DN14 999 aa4.85□□□□□ -1.63
NCKAP1-203ENST00000471640 ZNF280CQ8ND82 737 aa4.85□□□□□ -1.63
NCKAP1-203ENST00000471640 MYO19Q96H55 970 aa4.85□□□□□ -1.63
NCKAP1-203ENST00000471640 CEP63Q96MT8 703 aa4.85□□□□□ -1.63
NCKAP1-203ENST00000471640 BRD7Q9NPI1 651 aa4.85□□□□□ -1.63
NCKAP1-203ENST00000471640 STRN4Q9NRL3 753 aa4.85□□□□□ -1.63
NCKAP1-203ENST00000471640 HCN2Q9UL51 889 aa4.85□□□□□ -1.63
NCKAP1-203ENST00000471640 ELOA3CA0A087WX78 387 aaPredicted RBP4.84□□□□□ -1.63
NCKAP1-203ENST00000471640 ARID3CA6NKF2 412 aa4.84□□□□□ -1.63
NCKAP1-203ENST00000471640 ELOA3DA6NLF2 546 aaPredicted RBP4.84□□□□□ -1.63
NCKAP1-203ENST00000471640 SIN3BO75182 1162 aa4.84□□□□□ -1.63
NCKAP1-203ENST00000471640 ELOA3BQ3SY89 546 aa4.84□□□□□ -1.63
NCKAP1-203ENST00000471640 BTLAQ7Z6A9 289 aa4.84□□□□□ -1.63
NCKAP1-203ENST00000471640 ELOA3Q8NG57 546 aa4.84□□□□□ -1.63
NCKAP1-203ENST00000471640 STK32AQ8WU08 396 aa4.84□□□□□ -1.63
NCKAP1-203ENST00000471640 FMNL2Q96PY5 1086 aa4.84□□□□□ -1.63
NCKAP1-203ENST00000471640 KRTAP4-7Q9BYR0 210 aa4.84□□□□□ -1.63
NCKAP1-203ENST00000471640 EFCC1Q9HA90 598 aa4.84□□□□□ -1.63
NCKAP1-203ENST00000471640 KCNH4Q9UQ05 1017 aa4.84□□□□□ -1.63
NCKAP1-203ENST00000471640 LGR5O75473 907 aa4.83□□□□□ -1.64
NCKAP1-203ENST00000471640 PPP1R15AO75807 674 aaPredicted RBP4.83□□□□□ -1.64
NCKAP1-203ENST00000471640 ELNP15502 786 aa4.83□□□□□ -1.64
NCKAP1-203ENST00000471640 EPB42P16452 691 aa4.83□□□□□ -1.64
NCKAP1-203ENST00000471640 NRG1Q02297 640 aaPredicted RBP4.83□□□□□ -1.64
NCKAP1-203ENST00000471640 SPEM2Q0P670 501 aa4.83□□□□□ -1.64
NCKAP1-203ENST00000471640 FAM69CQ0P6D2 419 aa4.83□□□□□ -1.64
NCKAP1-203ENST00000471640 SFSWAPQ12872 951 aaKnown RBP4.83□□□□□ -1.64
NCKAP1-203ENST00000471640 LCE1DQ5T752 114 aa4.83□□□□□ -1.64
NCKAP1-203ENST00000471640 TMEM164Q5U3C3 297 aa4.83□□□□□ -1.64
NCKAP1-203ENST00000471640 FCHSD1Q86WN1 690 aa4.83□□□□□ -1.64
NCKAP1-203ENST00000471640 CCDC82Q8N4S0 544 aa4.83□□□□□ -1.64
NCKAP1-203ENST00000471640 CLP1Q92989 425 aaKnown RBP4.83□□□□□ -1.64
NCKAP1-203ENST00000471640 COL26A1Q96A83 441 aa4.83□□□□□ -1.64
NCKAP1-203ENST00000471640 QTRT2Q9H974 415 aaKnown RBP4.83□□□□□ -1.64
NCKAP1-203ENST00000471640 ADARB2-AS1A8MUL3 147 aa4.82□□□□□ -1.64
NCKAP1-203ENST00000471640 PCBP4P57723 403 aaKnown RBP4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms