RNA–Protein interactions for RNA: ENST00000471635.5

RBM39-228, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-228ENST00000471635 SIX5Q8N196 739 aa8.37□□□□□ -1.07
RBM39-228ENST00000471635 TSEN2Q8NCE0 465 aaKnown RBP8.37□□□□□ -1.07
RBM39-228ENST00000471635 RNF112Q9ULX5 631 aa8.37□□□□□ -1.07
RBM39-228ENST00000471635 SIN3BO75182 1162 aa8.36□□□□□ -1.07
RBM39-228ENST00000471635 SYT9Q86SS6 491 aa8.36□□□□□ -1.07
RBM39-228ENST00000471635 PPP1R12CQ9BZL4 782 aa8.36□□□□□ -1.07
RBM39-228ENST00000471635 M0R2N6 131 aa8.35□□□□□ -1.07
RBM39-228ENST00000471635 EML1O00423 815 aa8.35□□□□□ -1.07
RBM39-228ENST00000471635 DKK1O94907 266 aa8.35□□□□□ -1.07
RBM39-228ENST00000471635 NID1P14543 1247 aa8.35□□□□□ -1.07
RBM39-228ENST00000471635 PSMA6P60900 246 aaKnown RBP8.35□□□□□ -1.07
RBM39-228ENST00000471635 LRRC69Q6ZNQ3 347 aa8.35□□□□□ -1.07
RBM39-228ENST00000471635 CHMP3Q9Y3E7 222 aa8.35□□□□□ -1.07
RBM39-228ENST00000471635 EFSO43281 561 aa8.34□□□□□ -1.07
RBM39-228ENST00000471635 RHPN1Q8TCX5 695 aa8.34□□□□□ -1.07
RBM39-228ENST00000471635 TP53INP1Q96A56 240 aa8.34□□□□□ -1.07
RBM39-228ENST00000471635 NEUROD4Q9HD90 331 aa8.34□□□□□ -1.07
RBM39-228ENST00000471635 HCN4Q9Y3Q4 1203 aa8.34□□□□□ -1.07
RBM39-228ENST00000471635 PPP1R12BO60237 982 aaPredicted RBP8.33□□□□□ -1.08
RBM39-228ENST00000471635 ALBP02768 609 aa8.33□□□□□ -1.08
RBM39-228ENST00000471635 LMOD1P29536 600 aaPredicted RBP8.33□□□□□ -1.08
RBM39-228ENST00000471635 LARP1Q6PKG0 1096 aaKnown RBP8.33□□□□□ -1.08
RBM39-228ENST00000471635 MICALL1Q8N3F8 863 aa8.33□□□□□ -1.08
RBM39-228ENST00000471635 STRN4Q9NRL3 753 aa8.33□□□□□ -1.08
RBM39-228ENST00000471635 ZNF777Q9ULD5 760 aaPredicted RBP8.33□□□□□ -1.08
RBM39-228ENST00000471635 SEC13P55735 322 aa8.32□□□□□ -1.08
RBM39-228ENST00000471635 CRTC2Q53ET0 693 aaPredicted RBP8.32□□□□□ -1.08
RBM39-228ENST00000471635 TNFRSF25Q93038 417 aa8.32□□□□□ -1.08
RBM39-228ENST00000471635 LENG1Q96BZ8 264 aaPredicted RBP8.32□□□□□ -1.08
RBM39-228ENST00000471635 PHACTR1Q9C0D0 580 aa8.32□□□□□ -1.08
RBM39-228ENST00000471635 STARD13Q9Y3M8 1113 aa8.32□□□□□ -1.08
RBM39-228ENST00000471635 LGR5O75473 907 aa8.31□□□□□ -1.08
RBM39-228ENST00000471635 SELPP16109 830 aa8.31□□□□□ -1.08
RBM39-228ENST00000471635 C7orf43Q8WVR3 580 aa8.31□□□□□ -1.08
RBM39-228ENST00000471635 USP17L15C9J2P7 530 aa8.3□□□□□ -1.08
RBM39-228ENST00000471635 USP17L10C9JJH3 530 aa8.3□□□□□ -1.08
RBM39-228ENST00000471635 USP17L13C9JLJ4 530 aa8.3□□□□□ -1.08
RBM39-228ENST00000471635 USP17L12C9JPN9 530 aa8.3□□□□□ -1.08
RBM39-228ENST00000471635 USP17L11C9JVI0 530 aa8.3□□□□□ -1.08
RBM39-228ENST00000471635 USP17L21D6R901 530 aa8.3□□□□□ -1.08
RBM39-228ENST00000471635 USP17L18D6R9N7 530 aa8.3□□□□□ -1.08
RBM39-228ENST00000471635 USP17L22D6RA61 530 aa8.3□□□□□ -1.08
RBM39-228ENST00000471635 USP17L17D6RBQ6 530 aa8.3□□□□□ -1.08
RBM39-228ENST00000471635 USP17L19D6RCP7 530 aa8.3□□□□□ -1.08
RBM39-228ENST00000471635 USP17L20D6RJB6 530 aa8.3□□□□□ -1.08
RBM39-228ENST00000471635 C21orf2O43822 256 aa8.3□□□□□ -1.08
RBM39-228ENST00000471635 USP17L24Q0WX57 530 aa8.3□□□□□ -1.08
RBM39-228ENST00000471635 DPYDQ12882 1025 aa8.3□□□□□ -1.08
RBM39-228ENST00000471635 PTK7Q13308 1070 aa8.3□□□□□ -1.08
RBM39-228ENST00000471635 KANK4Q5T7N3 995 aaPredicted RBP8.3□□□□□ -1.08
RBM39-228ENST00000471635 CHMP7Q8WUX9 453 aaPredicted RBP8.3□□□□□ -1.08
RBM39-228ENST00000471635 SCG3Q8WXD2 468 aaKnown RBP8.3□□□□□ -1.08
RBM39-228ENST00000471635 HSH2DQ96JZ2 352 aa8.3□□□□□ -1.08
RBM39-228ENST00000471635 HINFPQ9BQA5 517 aa8.3□□□□□ -1.08
RBM39-228ENST00000471635 VRTNQ9H8Y1 702 aa8.3□□□□□ -1.08
RBM39-228ENST00000471635 GPC6Q9Y625 555 aaPredicted RBP8.3□□□□□ -1.08
RBM39-228ENST00000471635 ATAD2Q6PL18 1390 aa8.3□□□□□ -1.08
RBM39-228ENST00000471635 HIRAP54198 1017 aaPredicted RBP8.29□□□□□ -1.08
RBM39-228ENST00000471635 TRAPPC3LQ5T215 181 aa8.29□□□□□ -1.08
RBM39-228ENST00000471635 C1orf53Q5VUE5 145 aa8.29□□□□□ -1.08
RBM39-228ENST00000471635 C8orf86Q6ZUL3 223 aa8.29□□□□□ -1.08
RBM39-228ENST00000471635 SSBP4Q9BWG4 385 aaPredicted RBP8.29□□□□□ -1.08
RBM39-228ENST00000471635 PCMTD2Q9NV79 361 aa8.29□□□□□ -1.08
RBM39-228ENST00000471635 RAC1P63000 192 aa8.28□□□□□ -1.08
RBM39-228ENST00000471635 POTEAQ6S8J7 498 aa8.28□□□□□ -1.08
RBM39-228ENST00000471635 ANKMY2Q8IV38 441 aa8.28□□□□□ -1.08
RBM39-228ENST00000471635 ALDH16A1Q8IZ83 802 aa8.28□□□□□ -1.08
RBM39-228ENST00000471635 NGLY1Q96IV0 654 aa8.28□□□□□ -1.08
RBM39-228ENST00000471635 A0A0A0MRY4 1105 aa8.27□□□□□ -1.09
RBM39-228ENST00000471635 FAM196BA6NMK8 535 aa8.27□□□□□ -1.09
RBM39-228ENST00000471635 ADH7P40394 386 aa8.27□□□□□ -1.09
RBM39-228ENST00000471635 SFSWAPQ12872 951 aaKnown RBP8.27□□□□□ -1.09
RBM39-228ENST00000471635 FZD5Q13467 585 aa8.27□□□□□ -1.09
RBM39-228ENST00000471635 ZNF280CQ8ND82 737 aa8.27□□□□□ -1.09
RBM39-228ENST00000471635 GAS2L2Q8NHY3 880 aa8.27□□□□□ -1.09
RBM39-228ENST00000471635 C2orf49Q9BVC5 232 aaPredicted RBP8.27□□□□□ -1.09
RBM39-228ENST00000471635 LILRB5O75023 590 aa8.26□□□□□ -1.09
RBM39-228ENST00000471635 IRAK1P51617 712 aa8.26□□□□□ -1.09
RBM39-228ENST00000471635 NEUROD1Q13562 356 aa8.26□□□□□ -1.09
RBM39-228ENST00000471635 CDCA8Q53HL2 280 aa8.26□□□□□ -1.09
RBM39-228ENST00000471635 CFAP70Q5T0N1 1121 aa8.26□□□□□ -1.09
RBM39-228ENST00000471635 C20orf204Q6ZNR8 217 aa8.26□□□□□ -1.09
RBM39-228ENST00000471635 CEP63Q96MT8 703 aa8.26□□□□□ -1.09
RBM39-228ENST00000471635 KRTAP4-9Q9BYQ8 210 aa8.26□□□□□ -1.09
RBM39-228ENST00000471635 ANKIB1Q9P2G1 1089 aa8.26□□□□□ -1.09
RBM39-228ENST00000471635 RFX1P22670 979 aa8.25□□□□□ -1.09
RBM39-228ENST00000471635 SUSD3Q96L08 255 aa8.25□□□□□ -1.09
RBM39-228ENST00000471635 BRD7Q9NPI1 651 aa8.25□□□□□ -1.09
RBM39-228ENST00000471635 USP21Q9UK80 565 aa8.25□□□□□ -1.09
RBM39-228ENST00000471635 ARID1BQ8NFD5 2236 aaPredicted RBP8.25□□□□□ -1.09
RBM39-228ENST00000471635 STAG2Q8N3U4 1231 aa8.24□□□□□ -1.09
RBM39-228ENST00000471635 SLC30A3Q99726 388 aa8.24□□□□□ -1.09
RBM39-228ENST00000471635 TYRO3Q06418 890 aa8.23□□□□□ -1.09
RBM39-228ENST00000471635 SHISA2Q6UWI4 295 aa8.23□□□□□ -1.09
RBM39-228ENST00000471635 RAB44Q7Z6P3 723 aaPredicted RBP8.23□□□□□ -1.09
RBM39-228ENST00000471635 SPEM2Q0P670 501 aa8.22□□□□□ -1.09
RBM39-228ENST00000471635 ARXQ96QS3 562 aa8.22□□□□□ -1.09
RBM39-228ENST00000471635 IGFBP4P22692 258 aa8.21□□□□□ -1.1
RBM39-228ENST00000471635 SLC51AQ86UW1 340 aa8.21□□□□□ -1.1
RBM39-228ENST00000471635 KCNH4Q9UQ05 1017 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms