RNA–Protein interactions for RNA: ENST00000470280.1

LDHB-205, Transcript of lactate dehydrogenase B, humanhuman

TSL 2

Gene LDHB, Length 710 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHB-205ENST00000470280 FANCIQ9NVI1 1328 aa13.6□□□□□ -0.23
LDHB-205ENST00000470280 IBTKQ9P2D0 1353 aaPredicted RBP13.59□□□□□ -0.23
LDHB-205ENST00000470280 TCERG1O14776 1098 aaKnown RBP13.59□□□□□ -0.23
LDHB-205ENST00000470280 GTF2E1P29083 439 aaPredicted RBP13.59□□□□□ -0.23
LDHB-205ENST00000470280 TCIRG1Q13488 830 aa13.59□□□□□ -0.23
LDHB-205ENST00000470280 STYK1Q6J9G0 422 aa13.59□□□□□ -0.23
LDHB-205ENST00000470280 ANKRD13DQ6ZTN6 518 aa13.59□□□□□ -0.23
LDHB-205ENST00000470280 C3orf67Q6ZVT6 689 aa13.59□□□□□ -0.23
LDHB-205ENST00000470280 NLRP10Q86W26 655 aa13.59□□□□□ -0.23
LDHB-205ENST00000470280 SYNE4Q8N205 404 aa13.59□□□□□ -0.23
LDHB-205ENST00000470280 PLBD2Q8NHP8 589 aa13.59□□□□□ -0.23
LDHB-205ENST00000470280 MASTLQ96GX5 879 aa13.59□□□□□ -0.23
LDHB-205ENST00000470280 NYXQ9GZU5 481 aa13.59□□□□□ -0.23
LDHB-205ENST00000470280 HYPKQ9NX55 129 aa13.59□□□□□ -0.23
LDHB-205ENST00000470280 NFKBIEO00221 500 aa13.58□□□□□ -0.24
LDHB-205ENST00000470280 C21orf2O43822 256 aa13.58□□□□□ -0.24
LDHB-205ENST00000470280 PARP10Q53GL7 1025 aa13.58□□□□□ -0.24
LDHB-205ENST00000470280 C9orf131Q5VYM1 1079 aa13.58□□□□□ -0.24
LDHB-205ENST00000470280 PRPF40BQ6NWY9 871 aaKnown RBP13.58□□□□□ -0.24
LDHB-205ENST00000470280 ZNF521Q96K83 1311 aa13.58□□□□□ -0.24
LDHB-205ENST00000470280 NPR1P16066 1061 aa13.57□□□□□ -0.24
LDHB-205ENST00000470280 TWISTNBQ3B726 338 aaPredicted RBP13.57□□□□□ -0.24
LDHB-205ENST00000470280 CRY2Q49AN0 593 aa13.57□□□□□ -0.24
LDHB-205ENST00000470280 CNKSR1Q969H4 720 aa13.57□□□□□ -0.24
LDHB-205ENST00000470280 ISCA1Q9BUE6 129 aa13.57□□□□□ -0.24
LDHB-205ENST00000470280 UTP14AQ9BVJ6 771 aaKnown RBP13.57□□□□□ -0.24
LDHB-205ENST00000470280 SLX4Q8IY92 1834 aa13.57□□□□□ -0.24
LDHB-205ENST00000470280 RIC1Q4ADV7 1423 aa13.56□□□□□ -0.24
LDHB-205ENST00000470280 ANKRD36CQ5JPF3 1778 aa13.56□□□□□ -0.24
LDHB-205ENST00000470280 ATP5J2-PTCD1G3V325 749 aa13.56□□□□□ -0.24
LDHB-205ENST00000470280 EXOSC9Q06265 439 aaKnown RBP13.56□□□□□ -0.24
LDHB-205ENST00000470280 HSP90AB3PQ58FF7 597 aa13.56□□□□□ -0.24
LDHB-205ENST00000470280 CCDC30Q5VVM6 783 aa13.56□□□□□ -0.24
LDHB-205ENST00000470280 OLFM4Q6UX06 510 aa13.56□□□□□ -0.24
LDHB-205ENST00000470280 PPP1R42Q7Z4L9 355 aa13.56□□□□□ -0.24
LDHB-205ENST00000470280 SLC51AQ86UW1 340 aa13.56□□□□□ -0.24
LDHB-205ENST00000470280 ZNF526Q8TF50 670 aaPredicted RBP13.56□□□□□ -0.24
LDHB-205ENST00000470280 C7orf43Q8WVR3 580 aa13.56□□□□□ -0.24
LDHB-205ENST00000470280 CCER2I3L3R5 266 aa13.55□□□□□ -0.24
LDHB-205ENST00000470280 SLC10A5Q5PT55 438 aa13.55□□□□□ -0.24
LDHB-205ENST00000470280 G2E3Q7L622 706 aa13.55□□□□□ -0.24
LDHB-205ENST00000470280 RNF181Q9P0P0 153 aa13.55□□□□□ -0.24
LDHB-205ENST00000470280 VAMP4O75379 141 aa13.54□□□□□ -0.24
LDHB-205ENST00000470280 HCLS1P14317 486 aaPredicted RBP13.54□□□□□ -0.24
LDHB-205ENST00000470280 RIC3Q7Z5B4 369 aa13.54□□□□□ -0.24
LDHB-205ENST00000470280 TRMT112Q9UI30 125 aaKnown RBP13.54□□□□□ -0.24
LDHB-205ENST00000470280 ARFGEF2Q9Y6D5 1785 aa13.53□□□□□ -0.24
LDHB-205ENST00000470280 CACNA1SQ13698 1873 aa13.53□□□□□ -0.24
LDHB-205ENST00000470280 HOXA10P31260 410 aaPredicted RBP13.53□□□□□ -0.24
LDHB-205ENST00000470280 GOLGA2Q08379 1002 aa13.53□□□□□ -0.24
LDHB-205ENST00000470280 MYD88Q99836 296 aa13.53□□□□□ -0.24
LDHB-205ENST00000470280 LMNB1P20700 586 aa13.52□□□□□ -0.25
LDHB-205ENST00000470280 ALDH1B1P30837 517 aa13.52□□□□□ -0.25
LDHB-205ENST00000470280 TRIM28Q13263 835 aaKnown RBP13.52□□□□□ -0.25
LDHB-205ENST00000470280 DIEXFQ68CQ4 756 aaKnown RBP13.52□□□□□ -0.25
LDHB-205ENST00000470280 MIER1Q8N108 512 aa13.52□□□□□ -0.25
LDHB-205ENST00000470280 FAM89AQ96GI7 184 aa13.52□□□□□ -0.25
LDHB-205ENST00000470280 GPBP1L1Q9HC44 474 aaPredicted RBP13.52□□□□□ -0.25
LDHB-205ENST00000470280 RNF123Q5XPI4 1314 aa13.52□□□□□ -0.25
LDHB-205ENST00000470280 SBF1O95248 1867 aa13.52□□□□□ -0.25
LDHB-205ENST00000470280 FER1L6Q2WGJ9 1857 aa13.51□□□□□ -0.25
LDHB-205ENST00000470280 SNED1Q8TER0 1413 aa13.51□□□□□ -0.25
LDHB-205ENST00000470280 SH3TC1Q8TE82 1336 aa13.51□□□□□ -0.25
LDHB-205ENST00000470280 PI4KAP2A4QPH2 592 aa13.51□□□□□ -0.25
LDHB-205ENST00000470280 RTL5Q5HYW3 569 aaPredicted RBP13.51□□□□□ -0.25
LDHB-205ENST00000470280 PI4KAP1Q8N8J0 262 aa13.51□□□□□ -0.25
LDHB-205ENST00000470280 RPGRQ92834 1020 aaKnown RBP13.51□□□□□ -0.25
LDHB-205ENST00000470280 NLRP3Q96P20 1036 aa13.51□□□□□ -0.25
LDHB-205ENST00000470280 METTL22Q9BUU2 404 aaPredicted RBP13.51□□□□□ -0.25
LDHB-205ENST00000470280 STK31Q9BXU1 1019 aa13.51□□□□□ -0.25
LDHB-205ENST00000470280 MYH16Q9H6N6 1097 aa13.51□□□□□ -0.25
LDHB-205ENST00000470280 MAP3K2Q9Y2U5 619 aa13.51□□□□□ -0.25
LDHB-205ENST00000470280 LTBP3Q9NS15 1303 aa13.5□□□□□ -0.25
LDHB-205ENST00000470280 CCDC93Q567U6 631 aa13.5□□□□□ -0.25
LDHB-205ENST00000470280 KSR2Q6VAB6 950 aa13.5□□□□□ -0.25
LDHB-205ENST00000470280 JARID2Q92833 1246 aaPredicted RBP13.5□□□□□ -0.25
LDHB-205ENST00000470280 CRAMP1Q96RY5 1269 aa13.5□□□□□ -0.25
LDHB-205ENST00000470280 CHMP4AQ9BY43 222 aa13.5□□□□□ -0.25
LDHB-205ENST00000470280 TAOK3Q9H2K8 898 aa13.5□□□□□ -0.25
LDHB-205ENST00000470280 ABCC4O15439 1325 aa13.49□□□□□ -0.25
LDHB-205ENST00000470280 KIF3CO14782 793 aa13.49□□□□□ -0.25
LDHB-205ENST00000470280 DDX58O95786 925 aaKnown RBP13.49□□□□□ -0.25
LDHB-205ENST00000470280 IGKV5-2P06315 115 aa13.49□□□□□ -0.25
LDHB-205ENST00000470280 FLIIQ13045 1269 aa13.49□□□□□ -0.25
LDHB-205ENST00000470280 CDCA7LQ96GN5 454 aa13.49□□□□□ -0.25
LDHB-205ENST00000470280 RBM17Q96I25 401 aaKnown RBP13.49□□□□□ -0.25
LDHB-205ENST00000470280 NMRK2Q9NPI5 230 aa13.49□□□□□ -0.25
LDHB-205ENST00000470280 LAMB2P55268 1798 aa13.48□□□□□ -0.25
LDHB-205ENST00000470280 DDX60Q8IY21 1712 aaKnown RBP13.48□□□□□ -0.25
LDHB-205ENST00000470280 COL4A1P02462 1669 aa13.48□□□□□ -0.25
LDHB-205ENST00000470280 SOGA3Q5TF21 947 aa13.48□□□□□ -0.25
LDHB-205ENST00000470280 IRS4O14654 1257 aaPredicted RBP13.47□□□□□ -0.25
LDHB-205ENST00000470280 PPEF1O14829 653 aaPredicted RBP13.47□□□□□ -0.25
LDHB-205ENST00000470280 C1QTNF8P60827 252 aa13.47□□□□□ -0.25
LDHB-205ENST00000470280 FKBP4Q02790 459 aaKnown RBP eCLIP13.47□□□□□ -0.25
LDHB-205ENST00000470280 SLFN5Q08AF3 891 aa13.47□□□□□ -0.25
LDHB-205ENST00000470280 CWF19L2Q2TBE0 894 aaKnown RBP13.47□□□□□ -0.25
LDHB-205ENST00000470280 ZBTB38Q8NAP3 1195 aaPredicted RBP13.47□□□□□ -0.25
LDHB-205ENST00000470280 CCDC191Q8NCU4 936 aa13.47□□□□□ -0.25
LDHB-205ENST00000470280 ZNF277Q9NRM2 450 aaPredicted RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms