RNA–Protein interactions for RNA: ENST00000470170.1

COL11A1-208, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 785 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-208ENST00000470170 ELOA3Q8NG57 546 aa11.16□□□□□ -0.62
COL11A1-208ENST00000470170 STK32AQ8WU08 396 aa11.16□□□□□ -0.62
COL11A1-208ENST00000470170 VTI1AQ96AJ9 217 aa11.16□□□□□ -0.62
COL11A1-208ENST00000470170 MDFIQ99750 246 aa11.16□□□□□ -0.62
COL11A1-208ENST00000470170 TGFBR3LH3BV60 316 aa11.15□□□□□ -0.62
COL11A1-208ENST00000470170 GNB5O14775 395 aa11.15□□□□□ -0.62
COL11A1-208ENST00000470170 DGKZQ13574 1117 aa11.15□□□□□ -0.62
COL11A1-208ENST00000470170 PLA2G4EQ3MJ16 856 aa11.15□□□□□ -0.62
COL11A1-208ENST00000470170 IER5Q5VY09 327 aa11.15□□□□□ -0.62
COL11A1-208ENST00000470170 PRIMPOLQ96LW4 560 aa11.15□□□□□ -0.62
COL11A1-208ENST00000470170 ACIN1Q9UKV3 1341 aaKnown RBP11.14□□□□□ -0.63
COL11A1-208ENST00000470170 ITGB2P05107 769 aa11.14□□□□□ -0.63
COL11A1-208ENST00000470170 ELOAQ14241 798 aaKnown RBP11.14□□□□□ -0.63
COL11A1-208ENST00000470170 BHMTQ93088 406 aa11.14□□□□□ -0.63
COL11A1-208ENST00000470170 DMGDHQ9UI17 866 aaKnown RBP11.14□□□□□ -0.63
COL11A1-208ENST00000470170 PRMT3O60678 531 aa11.13□□□□□ -0.63
COL11A1-208ENST00000470170 ALAS2P22557 587 aa11.13□□□□□ -0.63
COL11A1-208ENST00000470170 FKBP5Q13451 457 aaPredicted RBP11.13□□□□□ -0.63
COL11A1-208ENST00000470170 NEUROD1Q13562 356 aa11.13□□□□□ -0.63
COL11A1-208ENST00000470170 SWI5Q1ZZU3 235 aa11.13□□□□□ -0.63
COL11A1-208ENST00000470170 TNFRSF25Q93038 417 aa11.13□□□□□ -0.63
COL11A1-208ENST00000470170 CCDC97Q96F63 343 aaPredicted RBP11.13□□□□□ -0.63
COL11A1-208ENST00000470170 ADARB2-AS1A8MUL3 147 aa11.12□□□□□ -0.63
COL11A1-208ENST00000470170 FAM69CQ0P6D2 419 aa11.12□□□□□ -0.63
COL11A1-208ENST00000470170 KRBA1A5PL33 1030 aa11.11□□□□□ -0.63
COL11A1-208ENST00000470170 PIK3R2O00459 728 aa11.11□□□□□ -0.63
COL11A1-208ENST00000470170 ADH7P40394 386 aa11.11□□□□□ -0.63
COL11A1-208ENST00000470170 ATG7O95352 703 aa11.1□□□□□ -0.63
COL11A1-208ENST00000470170 GRNP28799 593 aaKnown RBP11.1□□□□□ -0.63
COL11A1-208ENST00000470170 IDH3AP50213 366 aa11.1□□□□□ -0.63
COL11A1-208ENST00000470170 MYO19Q96H55 970 aa11.1□□□□□ -0.63
COL11A1-208ENST00000470170 LRFN2Q9ULH4 789 aa11.1□□□□□ -0.63
COL11A1-208ENST00000470170 IGHA1P01876 353 aa11.09□□□□□ -0.63
COL11A1-208ENST00000470170 OCLNQ16625 522 aa11.09□□□□□ -0.63
COL11A1-208ENST00000470170 TMEM164Q5U3C3 297 aa11.09□□□□□ -0.63
COL11A1-208ENST00000470170 TRIM11Q96F44 468 aa11.09□□□□□ -0.63
COL11A1-208ENST00000470170 SERPINA10Q9UK55 444 aa11.09□□□□□ -0.63
COL11A1-208ENST00000470170 STARD13Q9Y3M8 1113 aa11.09□□□□□ -0.63
COL11A1-208ENST00000470170 INPP5BP32019 993 aa11.08□□□□□ -0.64
COL11A1-208ENST00000470170 TBC1D8BQ0IIM8 1120 aa11.08□□□□□ -0.64
COL11A1-208ENST00000470170 C11orf91Q3C1V1 193 aa11.08□□□□□ -0.64
COL11A1-208ENST00000470170 PBXIP1Q96AQ6 731 aa11.08□□□□□ -0.64
COL11A1-208ENST00000470170 GSX2Q9BZM3 304 aa11.08□□□□□ -0.64
COL11A1-208ENST00000470170 IGFLR1Q9H665 355 aa11.08□□□□□ -0.64
COL11A1-208ENST00000470170 NOP53Q9NZM5 478 aaKnown RBP11.08□□□□□ -0.64
COL11A1-208ENST00000470170 M0R082 166 aa11.07□□□□□ -0.64
COL11A1-208ENST00000470170 ALYREFQ86V81 257 aaKnown RBP11.07□□□□□ -0.64
COL11A1-208ENST00000470170 ZNF417Q8TAU3 575 aa11.07□□□□□ -0.64
COL11A1-208ENST00000470170 ZNF587Q96SQ5 575 aaPredicted RBP11.07□□□□□ -0.64
COL11A1-208ENST00000470170 SPOCK3Q9BQ16 436 aa11.07□□□□□ -0.64
COL11A1-208ENST00000470170 UBE2OQ9C0C9 1292 aaKnown RBP11.07□□□□□ -0.64
COL11A1-208ENST00000470170 MSTNO14793 375 aa11.06□□□□□ -0.64
COL11A1-208ENST00000470170 MICAL2O94851 1124 aa11.06□□□□□ -0.64
COL11A1-208ENST00000470170 ALBP02768 609 aa11.06□□□□□ -0.64
COL11A1-208ENST00000470170 CCINQ13939 588 aa11.06□□□□□ -0.64
COL11A1-208ENST00000470170 COX20Q5RI15 118 aa11.06□□□□□ -0.64
COL11A1-208ENST00000470170 C8orf86Q6ZUL3 223 aa11.06□□□□□ -0.64
COL11A1-208ENST00000470170 PNMA5Q96PV4 448 aa11.06□□□□□ -0.64
COL11A1-208ENST00000470170 PLVAPQ9BX97 442 aa11.06□□□□□ -0.64
COL11A1-208ENST00000470170 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.06□□□□□ -0.64
COL11A1-208ENST00000470170 EPB42P16452 691 aa11.05□□□□□ -0.64
COL11A1-208ENST00000470170 NFKB1P19838 968 aa11.05□□□□□ -0.64
COL11A1-208ENST00000470170 ARSDP51689 593 aa11.05□□□□□ -0.64
COL11A1-208ENST00000470170 IFT43Q96FT9 208 aa11.05□□□□□ -0.64
COL11A1-208ENST00000470170 MKNK1Q9BUB5 465 aa11.05□□□□□ -0.64
COL11A1-208ENST00000470170 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.05□□□□□ -0.64
COL11A1-208ENST00000470170 PROCP04070 461 aa11.04□□□□□ -0.64
COL11A1-208ENST00000470170 CAPN12Q6ZSI9 719 aa11.04□□□□□ -0.64
COL11A1-208ENST00000470170 MICALL1Q8N3F8 863 aa11.04□□□□□ -0.64
COL11A1-208ENST00000470170 SAP130Q9H0E3 1048 aa11.04□□□□□ -0.64
COL11A1-208ENST00000470170 CXXC1Q9P0U4 656 aaPredicted RBP11.03□□□□□ -0.64
COL11A1-208ENST00000470170 USP20Q9Y2K6 914 aa11.03□□□□□ -0.64
COL11A1-208ENST00000470170 COL9A3Q14050 684 aaPredicted RBP11.02□□□□□ -0.65
COL11A1-208ENST00000470170 KRT25Q7Z3Z0 450 aa11.02□□□□□ -0.65
COL11A1-208ENST00000470170 TREML1Q86YW5 311 aa11.02□□□□□ -0.65
COL11A1-208ENST00000470170 CCDC82Q8N4S0 544 aa11.02□□□□□ -0.65
COL11A1-208ENST00000470170 EFCC1Q9HA90 598 aa11.02□□□□□ -0.65
COL11A1-208ENST00000470170 SLC6A14Q9UN76 642 aa11.02□□□□□ -0.65
COL11A1-208ENST00000470170 OPLAHO14841 1288 aa11.01□□□□□ -0.65
COL11A1-208ENST00000470170 C20orf204Q6ZNR8 217 aa11.01□□□□□ -0.65
COL11A1-208ENST00000470170 DNAJB12Q9NXW2 375 aaKnown RBP11.01□□□□□ -0.65
COL11A1-208ENST00000470170 SLAIN2Q9P270 581 aa11.01□□□□□ -0.65
COL11A1-208ENST00000470170 C16orf46Q6P387 395 aa11□□□□□ -0.65
COL11A1-208ENST00000470170 CLP1Q92989 425 aaKnown RBP11□□□□□ -0.65
COL11A1-208ENST00000470170 ZFATQ9P243 1243 aa11□□□□□ -0.65
COL11A1-208ENST00000470170 C1QTNF9BB2RNN3 333 aa10.99□□□□□ -0.65
COL11A1-208ENST00000470170 TARSP26639 723 aaKnown RBP10.99□□□□□ -0.65
COL11A1-208ENST00000470170 CHRNA4P43681 627 aa10.99□□□□□ -0.65
COL11A1-208ENST00000470170 NAA30Q147X3 362 aaPredicted RBP10.99□□□□□ -0.65
COL11A1-208ENST00000470170 RGL4Q8IZJ4 473 aa10.99□□□□□ -0.65
COL11A1-208ENST00000470170 C1orf115Q9H7X2 142 aa10.99□□□□□ -0.65
COL11A1-208ENST00000470170 PRDM6Q9NQX0 595 aa10.99□□□□□ -0.65
COL11A1-208ENST00000470170 NAGPAQ9UK23 515 aa10.99□□□□□ -0.65
COL11A1-208ENST00000470170 RTCBQ9Y3I0 505 aaKnown RBP10.99□□□□□ -0.65
COL11A1-208ENST00000470170 SASH3O75995 380 aa10.98□□□□□ -0.65
COL11A1-208ENST00000470170 NID1P14543 1247 aa10.98□□□□□ -0.65
COL11A1-208ENST00000470170 SUZ12Q15022 739 aaKnown RBP10.98□□□□□ -0.65
COL11A1-208ENST00000470170 FAM26DQ5JW98 314 aa10.98□□□□□ -0.65
COL11A1-208ENST00000470170 CD163Q86VB7 1156 aa10.98□□□□□ -0.65
COL11A1-208ENST00000470170 ETFBKMTQ8IXQ9 262 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms