RNA–Protein interactions for RNA: ENST00000470117.2

USP30-205, Transcript of ubiquitin specific peptidase 30, humanhuman

TSL 5

Gene USP30, Length 615 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-205ENST00000470117 ANKRD36CQ5JPF3 1778 aa12.25□□□□□ -0.45
USP30-205ENST00000470117 IQCA1LA6NCM1 817 aa12.24□□□□□ -0.45
USP30-205ENST00000470117 IARSP41252 1262 aaKnown RBP12.24□□□□□ -0.45
USP30-205ENST00000470117 AIMP1Q12904 312 aaKnown RBP12.24□□□□□ -0.45
USP30-205ENST00000470117 PDIA6Q15084 440 aa12.24□□□□□ -0.45
USP30-205ENST00000470117 ZNF34Q8IZ26 560 aa12.24□□□□□ -0.45
USP30-205ENST00000470117 ZNF541Q9H0D2 1346 aa12.24□□□□□ -0.45
USP30-205ENST00000470117 PPEF1O14829 653 aaPredicted RBP12.23□□□□□ -0.45
USP30-205ENST00000470117 KRT24Q2M2I5 525 aa12.23□□□□□ -0.45
USP30-205ENST00000470117 LRP10Q7Z4F1 713 aa12.23□□□□□ -0.45
USP30-205ENST00000470117 XAGE3Q8WTP9 111 aa12.23□□□□□ -0.45
USP30-205ENST00000470117 RBM17Q96I25 401 aaKnown RBP12.23□□□□□ -0.45
USP30-205ENST00000470117 UTP14AQ9BVJ6 771 aaKnown RBP12.23□□□□□ -0.45
USP30-205ENST00000470117 CHL1O00533 1208 aa12.22□□□□□ -0.45
USP30-205ENST00000470117 TCERG1O14776 1098 aaKnown RBP12.22□□□□□ -0.45
USP30-205ENST00000470117 POTEIP0CG38 1075 aa12.22□□□□□ -0.45
USP30-205ENST00000470117 POTEJP0CG39 1038 aa12.22□□□□□ -0.45
USP30-205ENST00000470117 HSP90AB3PQ58FF7 597 aa12.22□□□□□ -0.45
USP30-205ENST00000470117 HDGFL1Q5TGJ6 251 aa12.22□□□□□ -0.45
USP30-205ENST00000470117 CC2D2BQ6DHV5 1058 aa12.22□□□□□ -0.45
USP30-205ENST00000470117 CHADLQ6NUI6 762 aa12.22□□□□□ -0.45
USP30-205ENST00000470117 C3orf67Q6ZVT6 689 aa12.22□□□□□ -0.45
USP30-205ENST00000470117 COPS6Q7L5N1 327 aa12.22□□□□□ -0.45
USP30-205ENST00000470117 SYNE4Q8N205 404 aa12.22□□□□□ -0.45
USP30-205ENST00000470117 JDP2Q8WYK2 163 aa12.22□□□□□ -0.45
USP30-205ENST00000470117 PRKRIP1Q9H875 184 aaPredicted RBP12.22□□□□□ -0.45
USP30-205ENST00000470117 ADAMTS8Q9UP79 889 aa12.22□□□□□ -0.45
USP30-205ENST00000470117 TRIM35Q9UPQ4 493 aa12.22□□□□□ -0.45
USP30-205ENST00000470117 SCN4AP35499 1836 aa12.22□□□□□ -0.45
USP30-205ENST00000470117 SNED1Q8TER0 1413 aa12.21□□□□□ -0.45
USP30-205ENST00000470117 RNF123Q5XPI4 1314 aa12.21□□□□□ -0.45
USP30-205ENST00000470117 HOXA10P31260 410 aaPredicted RBP12.21□□□□□ -0.45
USP30-205ENST00000470117 EAPPQ56P03 285 aaPredicted RBP12.21□□□□□ -0.45
USP30-205ENST00000470117 IFFO2Q5TF58 517 aa12.21□□□□□ -0.45
USP30-205ENST00000470117 L3MBTL3Q96JM7 780 aaPredicted RBP12.21□□□□□ -0.45
USP30-205ENST00000470117 NLRP3Q96P20 1036 aa12.21□□□□□ -0.45
USP30-205ENST00000470117 CRAMP1Q96RY5 1269 aa12.21□□□□□ -0.45
USP30-205ENST00000470117 PSMD1Q99460 953 aa12.21□□□□□ -0.45
USP30-205ENST00000470117 TMX4Q9H1E5 349 aaPredicted RBP12.21□□□□□ -0.45
USP30-205ENST00000470117 DDX21Q9NR30 783 aaKnown RBP eCLIP12.21□□□□□ -0.45
USP30-205ENST00000470117 CHPF2Q9P2E5 772 aa12.21□□□□□ -0.45
USP30-205ENST00000470117 SLC51AQ86UW1 340 aa12.2□□□□□ -0.46
USP30-205ENST00000470117 LDHDQ86WU2 507 aa12.2□□□□□ -0.46
USP30-205ENST00000470117 JMYQ8N9B5 988 aa12.2□□□□□ -0.46
USP30-205ENST00000470117 TAF1DQ9H5J8 278 aaPredicted RBP12.2□□□□□ -0.46
USP30-205ENST00000470117 HACL1Q9UJ83 578 aa12.2□□□□□ -0.46
USP30-205ENST00000470117 HOXB7P09629 217 aa12.19□□□□□ -0.46
USP30-205ENST00000470117 EIF6P56537 245 aaKnown RBP12.19□□□□□ -0.46
USP30-205ENST00000470117 GRIPAP1Q4V328 841 aa12.19□□□□□ -0.46
USP30-205ENST00000470117 NLRP10Q86W26 655 aa12.19□□□□□ -0.46
USP30-205ENST00000470117 LARGE2Q8N3Y3 721 aa12.19□□□□□ -0.46
USP30-205ENST00000470117 ZNF428Q96B54 188 aa12.19□□□□□ -0.46
USP30-205ENST00000470117 TRMT112Q9UI30 125 aaKnown RBP12.19□□□□□ -0.46
USP30-205ENST00000470117 LAMB2P55268 1798 aa12.19□□□□□ -0.46
USP30-205ENST00000470117 COL4A5P29400 1685 aa12.19□□□□□ -0.46
USP30-205ENST00000470117 ABCC4O15439 1325 aa12.18□□□□□ -0.46
USP30-205ENST00000470117 SH3TC1Q8TE82 1336 aa12.18□□□□□ -0.46
USP30-205ENST00000470117 FZD9O00144 591 aa12.18□□□□□ -0.46
USP30-205ENST00000470117 HCLS1P14317 486 aaPredicted RBP12.18□□□□□ -0.46
USP30-205ENST00000470117 EPHX2P34913 555 aa12.18□□□□□ -0.46
USP30-205ENST00000470117 TCIRG1Q13488 830 aa12.18□□□□□ -0.46
USP30-205ENST00000470117 NIM1KQ8IY84 436 aa12.18□□□□□ -0.46
USP30-205ENST00000470117 GPC2Q8N158 579 aa12.18□□□□□ -0.46
USP30-205ENST00000470117 CFAP44Q96MT7 982 aa12.18□□□□□ -0.46
USP30-205ENST00000470117 DBF4Q9UBU7 674 aaPredicted RBP12.18□□□□□ -0.46
USP30-205ENST00000470117 CLEC11AQ9Y240 323 aa12.18□□□□□ -0.46
USP30-205ENST00000470117 GJA3Q9Y6H8 435 aa12.18□□□□□ -0.46
USP30-205ENST00000470117 PPIP5K2O43314 1243 aa12.17□□□□□ -0.46
USP30-205ENST00000470117 LMOD1P29536 600 aaPredicted RBP12.17□□□□□ -0.46
USP30-205ENST00000470117 SLC10A5Q5PT55 438 aa12.17□□□□□ -0.46
USP30-205ENST00000470117 DUSP27Q5VZP5 1158 aa12.17□□□□□ -0.46
USP30-205ENST00000470117 CREBZFQ9NS37 354 aa12.17□□□□□ -0.46
USP30-205ENST00000470117 MBIPQ9NS73 344 aa12.17□□□□□ -0.46
USP30-205ENST00000470117 RNF216Q9NWF9 866 aaPredicted RBP12.17□□□□□ -0.46
USP30-205ENST00000470117 ATP6V0A2Q9Y487 856 aa12.17□□□□□ -0.46
USP30-205ENST00000470117 ADAMTSL1Q8N6G6 1762 aa12.16□□□□□ -0.46
USP30-205ENST00000470117 APAF1O14727 1248 aa12.16□□□□□ -0.46
USP30-205ENST00000470117 HOXD11P31277 338 aaPredicted RBP12.16□□□□□ -0.46
USP30-205ENST00000470117 CALD1Q05682 793 aaKnown RBP12.16□□□□□ -0.46
USP30-205ENST00000470117 AOC3Q16853 763 aa12.16□□□□□ -0.46
USP30-205ENST00000470117 DDX46Q7L014 1031 aaKnown RBP12.16□□□□□ -0.46
USP30-205ENST00000470117 PNMA8AQ86V59 439 aaPredicted RBP12.16□□□□□ -0.46
USP30-205ENST00000470117 PLBD2Q8NHP8 589 aa12.16□□□□□ -0.46
USP30-205ENST00000470117 MKRN1Q9UHC7 482 aaKnown RBP12.16□□□□□ -0.46
USP30-205ENST00000470117 DDX60Q8IY21 1712 aaKnown RBP12.15□□□□□ -0.46
USP30-205ENST00000470117 GNAI1P63096 354 aa12.15□□□□□ -0.46
USP30-205ENST00000470117 GOLGA2Q08379 1002 aa12.15□□□□□ -0.46
USP30-205ENST00000470117 DPP8Q6V1X1 898 aaPredicted RBP12.15□□□□□ -0.46
USP30-205ENST00000470117 ANKRD13DQ6ZTN6 518 aa12.15□□□□□ -0.46
USP30-205ENST00000470117 SUPT20HQ8NEM7 779 aa12.15□□□□□ -0.46
USP30-205ENST00000470117 IFT57Q9NWB7 429 aa12.15□□□□□ -0.46
USP30-205ENST00000470117 HYPKQ9NX55 129 aa12.15□□□□□ -0.46
USP30-205ENST00000470117 LTBP1Q14766 1721 aa12.14□□□□□ -0.47
USP30-205ENST00000470117 PASKQ96RG2 1323 aa12.14□□□□□ -0.47
USP30-205ENST00000470117 ATP5J2-PTCD1G3V325 749 aa12.14□□□□□ -0.47
USP30-205ENST00000470117 HSPA1AP0DMV8 641 aaKnown RBP12.14□□□□□ -0.47
USP30-205ENST00000470117 HSPA1BP0DMV9 641 aaKnown RBP12.14□□□□□ -0.47
USP30-205ENST00000470117 GRAPQ13588 217 aa12.14□□□□□ -0.47
USP30-205ENST00000470117 GRAPLQ8TC17 118 aaPredicted RBP12.14□□□□□ -0.47
USP30-205ENST00000470117 ELL2O00472 640 aaPredicted RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms