RNA–Protein interactions for RNA: ENST00000469956.1

LCK-209, Transcript of LCK proto-oncogene, Src family tyrosine kinase, humanhuman

TSL 2

Gene LCK, Length 923 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCK-209ENST00000469956 C7orf43Q8WVR3 580 aa22.61■■□□□ 1.21
LCK-209ENST00000469956 CCDC27Q2M243 656 aa22.6■■□□□ 1.21
LCK-209ENST00000469956 CRY2Q49AN0 593 aa22.6■■□□□ 1.21
LCK-209ENST00000469956 SALL2Q9Y467 1007 aaPredicted RBP22.6■■□□□ 1.21
LCK-209ENST00000469956 TCIRG1Q13488 830 aa22.59■■□□□ 1.21
LCK-209ENST00000469956 HSP90AB3PQ58FF7 597 aa22.59■■□□□ 1.21
LCK-209ENST00000469956 NLRP10Q86W26 655 aa22.59■■□□□ 1.21
LCK-209ENST00000469956 UTP14AQ9BVJ6 771 aaKnown RBP22.59■■□□□ 1.21
LCK-209ENST00000469956 TAOK3Q9H2K8 898 aa22.59■■□□□ 1.21
LCK-209ENST00000469956 FAM9BQ8IZU0 186 aa22.58■■□□□ 1.21
LCK-209ENST00000469956 TSPYL6Q8N831 410 aa22.58■■□□□ 1.21
LCK-209ENST00000469956 PLBD2Q8NHP8 589 aa22.58■■□□□ 1.21
LCK-209ENST00000469956 PHAXQ9H814 394 aaKnown RBP22.58■■□□□ 1.21
LCK-209ENST00000469956 HYPKQ9NX55 129 aa22.58■■□□□ 1.21
LCK-209ENST00000469956 CCDC93Q567U6 631 aa22.57■■□□□ 1.2
LCK-209ENST00000469956 SOGA3Q5TF21 947 aa22.57■■□□□ 1.2
LCK-209ENST00000469956 ANKRD13DQ6ZTN6 518 aa22.57■■□□□ 1.2
LCK-209ENST00000469956 SLC51AQ86UW1 340 aa22.57■■□□□ 1.2
LCK-209ENST00000469956 SYNE4Q8N205 404 aa22.57■■□□□ 1.2
LCK-209ENST00000469956 RPGRQ92834 1020 aaKnown RBP22.57■■□□□ 1.2
LCK-209ENST00000469956 DDX60Q8IY21 1712 aaKnown RBP22.57■■□□□ 1.2
LCK-209ENST00000469956 KDM2BQ8NHM5 1336 aa22.57■■□□□ 1.2
LCK-209ENST00000469956 LTBP3Q9NS15 1303 aa22.57■■□□□ 1.2
LCK-209ENST00000469956 ALDH1B1P30837 517 aa22.56■■□□□ 1.2
LCK-209ENST00000469956 ZC3H4Q9UPT8 1303 aaKnown RBP22.56■■□□□ 1.2
LCK-209ENST00000469956 RRAGCQ9HB90 399 aa22.55■■□□□ 1.2
LCK-209ENST00000469956 ATP5J2-PTCD1G3V325 749 aa22.54■■□□□ 1.2
LCK-209ENST00000469956 HCLS1P14317 486 aaPredicted RBP22.54■■□□□ 1.2
LCK-209ENST00000469956 HOXA10P31260 410 aaPredicted RBP22.54■■□□□ 1.2
LCK-209ENST00000469956 TRMT112Q9UI30 125 aaKnown RBP22.54■■□□□ 1.2
LCK-209ENST00000469956 SLC10A5Q5PT55 438 aa22.53■■□□□ 1.2
LCK-209ENST00000469956 NLRP3Q96P20 1036 aa22.53■■□□□ 1.2
LCK-209ENST00000469956 ISCA1Q9BUE6 129 aa22.53■■□□□ 1.2
LCK-209ENST00000469956 SNED1Q8TER0 1413 aa22.53■■□□□ 1.2
LCK-209ENST00000469956 TAF1P21675 1872 aa22.53■■□□□ 1.2
LCK-209ENST00000469956 GLTPD2A6NH11 291 aa22.52■■□□□ 1.2
LCK-209ENST00000469956 TCERG1O14776 1098 aaKnown RBP22.52■■□□□ 1.2
LCK-209ENST00000469956 FKBP4Q02790 459 aaKnown RBP eCLIP22.52■■□□□ 1.2
LCK-209ENST00000469956 RBM17Q96I25 401 aaKnown RBP22.52■■□□□ 1.2
LCK-209ENST00000469956 IL16Q14005 1332 aa22.52■■□□□ 1.2
LCK-209ENST00000469956 RNF123Q5XPI4 1314 aa22.52■■□□□ 1.2
LCK-209ENST00000469956 NCBP3Q53F19 620 aaKnown RBP22.51■■□□□ 1.19
LCK-209ENST00000469956 CCDC30Q5VVM6 783 aa22.51■■□□□ 1.19
LCK-209ENST00000469956 ZNF277Q9NRM2 450 aaPredicted RBP22.51■■□□□ 1.19
LCK-209ENST00000469956 SH3TC1Q8TE82 1336 aa22.51■■□□□ 1.19
LCK-209ENST00000469956 GOLGA2Q08379 1002 aa22.5■■□□□ 1.19
LCK-209ENST00000469956 RIC3Q7Z5B4 369 aa22.5■■□□□ 1.19
LCK-209ENST00000469956 CRAMP1Q96RY5 1269 aa22.5■■□□□ 1.19
LCK-209ENST00000469956 FANCIQ9NVI1 1328 aa22.5■■□□□ 1.19
LCK-209ENST00000469956 WDR90Q96KV7 1748 aa22.49■■□□□ 1.19
LCK-209ENST00000469956 PPEF1O14829 653 aaPredicted RBP22.49■■□□□ 1.19
LCK-209ENST00000469956 TOMM70O94826 608 aa22.49■■□□□ 1.19
LCK-209ENST00000469956 TWISTNBQ3B726 338 aaPredicted RBP22.49■■□□□ 1.19
LCK-209ENST00000469956 RTL5Q5HYW3 569 aaPredicted RBP22.49■■□□□ 1.19
LCK-209ENST00000469956 RTKN2Q8IZC4 609 aa22.49■■□□□ 1.19
LCK-209ENST00000469956 FAM89AQ96GI7 184 aa22.49■■□□□ 1.19
LCK-209ENST00000469956 ABCC4O15439 1325 aa22.49■■□□□ 1.19
LCK-209ENST00000469956 C16orf71Q8IYS4 520 aaPredicted RBP22.47■■□□□ 1.19
LCK-209ENST00000469956 MYD88Q99836 296 aa22.47■■□□□ 1.19
LCK-209ENST00000469956 SPINK5Q9NQ38 1064 aaPredicted RBP22.47■■□□□ 1.19
LCK-209ENST00000469956 WDR63Q8IWG1 891 aa22.46■■□□□ 1.19
LCK-209ENST00000469956 COL4A1P02462 1669 aa22.46■■□□□ 1.19
LCK-209ENST00000469956 COL4A5P29400 1685 aa22.46■■□□□ 1.19
LCK-209ENST00000469956 HSPA6P17066 643 aa22.45■■□□□ 1.18
LCK-209ENST00000469956 DPY19L2Q6NUT2 758 aa22.45■■□□□ 1.18
LCK-209ENST00000469956 POTECB2RU33 542 aa22.44■■□□□ 1.18
LCK-209ENST00000469956 DDNO94850 711 aaPredicted RBP22.44■■□□□ 1.18
LCK-209ENST00000469956 IARSP41252 1262 aaKnown RBP22.44■■□□□ 1.18
LCK-209ENST00000469956 TRIM28Q13263 835 aaKnown RBP22.44■■□□□ 1.18
LCK-209ENST00000469956 G2E3Q7L622 706 aa22.44■■□□□ 1.18
LCK-209ENST00000469956 STK31Q9BXU1 1019 aa22.44■■□□□ 1.18
LCK-209ENST00000469956 ZNF541Q9H0D2 1346 aa22.43■■□□□ 1.18
LCK-209ENST00000469956 EXOSC9Q06265 439 aaKnown RBP22.43■■□□□ 1.18
LCK-209ENST00000469956 CC2D2BQ6DHV5 1058 aa22.43■■□□□ 1.18
LCK-209ENST00000469956 RBM46Q8TBY0 533 aaKnown RBP22.43■■□□□ 1.18
LCK-209ENST00000469956 PSMD1Q99460 953 aa22.43■■□□□ 1.18
LCK-209ENST00000469956 CHMP4AQ9BY43 222 aa22.43■■□□□ 1.18
LCK-209ENST00000469956 MAP3K2Q9Y2U5 619 aa22.43■■□□□ 1.18
LCK-209ENST00000469956 DDX58O95786 925 aaKnown RBP22.42■■□□□ 1.18
LCK-209ENST00000469956 VEGFAP15692 232 aaPredicted RBP22.42■■□□□ 1.18
LCK-209ENST00000469956 DDX46Q7L014 1031 aaKnown RBP22.42■■□□□ 1.18
LCK-209ENST00000469956 JARID2Q92833 1246 aaPredicted RBP22.42■■□□□ 1.18
LCK-209ENST00000469956 METTL22Q9BUU2 404 aaPredicted RBP22.42■■□□□ 1.18
LCK-209ENST00000469956 ATP6V0A2Q9Y487 856 aa22.42■■□□□ 1.18
LCK-209ENST00000469956 CEP350Q5VT06 3117 aa22.41■■□□□ 1.18
LCK-209ENST00000469956 LRRC37AA6NMS7 1700 aa22.41■■□□□ 1.18
LCK-209ENST00000469956 PI4KAP2A4QPH2 592 aa22.41■■□□□ 1.18
LCK-209ENST00000469956 IRS4O14654 1257 aaPredicted RBP22.41■■□□□ 1.18
LCK-209ENST00000469956 SLC4A2P04920 1241 aa22.41■■□□□ 1.18
LCK-209ENST00000469956 PI4KAP1Q8N8J0 262 aa22.41■■□□□ 1.18
LCK-209ENST00000469956 GRAPQ13588 217 aa22.4■■□□□ 1.18
LCK-209ENST00000469956 KSR2Q6VAB6 950 aa22.4■■□□□ 1.18
LCK-209ENST00000469956 GRAPLQ8TC17 118 aaPredicted RBP22.4■■□□□ 1.18
LCK-209ENST00000469956 VAMP4O75379 141 aa22.39■■□□□ 1.17
LCK-209ENST00000469956 ZBTB38Q8NAP3 1195 aaPredicted RBP22.39■■□□□ 1.17
LCK-209ENST00000469956 CCDC191Q8NCU4 936 aa22.39■■□□□ 1.17
LCK-209ENST00000469956 CWC25Q9NXE8 425 aaPredicted RBP22.39■■□□□ 1.17
LCK-209ENST00000469956 CACNA1FO60840 1977 aa22.39■■□□□ 1.17
LCK-209ENST00000469956 BBOX1O75936 387 aa22.38■■□□□ 1.17
LCK-209ENST00000469956 SF3B3Q15393 1217 aaKnown RBP22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms