RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 HOXB7P09629 217 aa22.66■■□□□ 1.22
MRPL28-208ENST00000469744 ZNF428Q96B54 188 aa22.66■■□□□ 1.22
MRPL28-208ENST00000469744 OLFM4Q6UX06 510 aa22.65■■□□□ 1.22
MRPL28-208ENST00000469744 PPP4R2Q9NY27 417 aa22.65■■□□□ 1.22
MRPL28-208ENST00000469744 DICER1Q9UPY3 1922 aaKnown RBP22.63■■□□□ 1.21
MRPL28-208ENST00000469744 PARP10Q53GL7 1025 aa22.63■■□□□ 1.21
MRPL28-208ENST00000469744 C3orf67Q6ZVT6 689 aa22.63■■□□□ 1.21
MRPL28-208ENST00000469744 PPP1R42Q7Z4L9 355 aa22.63■■□□□ 1.21
MRPL28-208ENST00000469744 C7orf43Q8WVR3 580 aa22.63■■□□□ 1.21
MRPL28-208ENST00000469744 DBF4Q9UBU7 674 aaPredicted RBP22.63■■□□□ 1.21
MRPL28-208ENST00000469744 CRY2Q49AN0 593 aa22.62■■□□□ 1.21
MRPL28-208ENST00000469744 C8orf58Q8NAV2 365 aa22.62■■□□□ 1.21
MRPL28-208ENST00000469744 TSR2Q969E8 191 aaKnown RBP22.62■■□□□ 1.21
MRPL28-208ENST00000469744 TAOK3Q9H2K8 898 aa22.62■■□□□ 1.21
MRPL28-208ENST00000469744 RIC1Q4ADV7 1423 aa22.61■■□□□ 1.21
MRPL28-208ENST00000469744 UTP14AQ9BVJ6 771 aaKnown RBP22.61■■□□□ 1.21
MRPL28-208ENST00000469744 CEP350Q5VT06 3117 aa22.61■■□□□ 1.21
MRPL28-208ENST00000469744 KDM2BQ8NHM5 1336 aa22.61■■□□□ 1.21
MRPL28-208ENST00000469744 NLRP10Q86W26 655 aa22.6■■□□□ 1.21
MRPL28-208ENST00000469744 WWC1Q8IX03 1113 aa22.6■■□□□ 1.21
MRPL28-208ENST00000469744 RPGRQ92834 1020 aaKnown RBP22.6■■□□□ 1.21
MRPL28-208ENST00000469744 SALL2Q9Y467 1007 aaPredicted RBP22.6■■□□□ 1.21
MRPL28-208ENST00000469744 TCIRG1Q13488 830 aa22.6■■□□□ 1.21
MRPL28-208ENST00000469744 CCDC93Q567U6 631 aa22.6■■□□□ 1.21
MRPL28-208ENST00000469744 HSP90AB3PQ58FF7 597 aa22.6■■□□□ 1.21
MRPL28-208ENST00000469744 SOGA3Q5TF21 947 aa22.6■■□□□ 1.21
MRPL28-208ENST00000469744 SYNE4Q8N205 404 aa22.6■■□□□ 1.21
MRPL28-208ENST00000469744 HYPKQ9NX55 129 aa22.6■■□□□ 1.21
MRPL28-208ENST00000469744 LAMB2P55268 1798 aa22.6■■□□□ 1.21
MRPL28-208ENST00000469744 LTBP3Q9NS15 1303 aa22.59■■□□□ 1.21
MRPL28-208ENST00000469744 ZC3H4Q9UPT8 1303 aaKnown RBP22.59■■□□□ 1.21
MRPL28-208ENST00000469744 ALDH1B1P30837 517 aa22.59■■□□□ 1.21
MRPL28-208ENST00000469744 SLC51AQ86UW1 340 aa22.59■■□□□ 1.21
MRPL28-208ENST00000469744 TSPYL6Q8N831 410 aa22.59■■□□□ 1.21
MRPL28-208ENST00000469744 PLBD2Q8NHP8 589 aa22.59■■□□□ 1.21
MRPL28-208ENST00000469744 RRAGCQ9HB90 399 aa22.59■■□□□ 1.21
MRPL28-208ENST00000469744 CCDC27Q2M243 656 aa22.58■■□□□ 1.2
MRPL28-208ENST00000469744 ANKRD13DQ6ZTN6 518 aa22.58■■□□□ 1.2
MRPL28-208ENST00000469744 HCLS1P14317 486 aaPredicted RBP22.57■■□□□ 1.2
MRPL28-208ENST00000469744 PHAXQ9H814 394 aaKnown RBP22.57■■□□□ 1.2
MRPL28-208ENST00000469744 ATP5J2-PTCD1G3V325 749 aa22.56■■□□□ 1.2
MRPL28-208ENST00000469744 TRMT112Q9UI30 125 aaKnown RBP22.56■■□□□ 1.2
MRPL28-208ENST00000469744 GLTPD2A6NH11 291 aa22.55■■□□□ 1.2
MRPL28-208ENST00000469744 TCERG1O14776 1098 aaKnown RBP22.55■■□□□ 1.2
MRPL28-208ENST00000469744 IRX6P78412 446 aaPredicted RBP22.55■■□□□ 1.2
MRPL28-208ENST00000469744 ZNF277Q9NRM2 450 aaPredicted RBP22.55■■□□□ 1.2
MRPL28-208ENST00000469744 TOMM70O94826 608 aa22.54■■□□□ 1.2
MRPL28-208ENST00000469744 HOXA10P31260 410 aaPredicted RBP22.54■■□□□ 1.2
MRPL28-208ENST00000469744 FKBP4Q02790 459 aaKnown RBP eCLIP22.54■■□□□ 1.2
MRPL28-208ENST00000469744 RBM17Q96I25 401 aaKnown RBP22.54■■□□□ 1.2
MRPL28-208ENST00000469744 NLRP3Q96P20 1036 aa22.54■■□□□ 1.2
MRPL28-208ENST00000469744 ZNF521Q96K83 1311 aa22.54■■□□□ 1.2
MRPL28-208ENST00000469744 SLC10A5Q5PT55 438 aa22.54■■□□□ 1.2
MRPL28-208ENST00000469744 C16orf71Q8IYS4 520 aaPredicted RBP22.54■■□□□ 1.2
MRPL28-208ENST00000469744 DDX60Q8IY21 1712 aaKnown RBP22.53■■□□□ 1.2
MRPL28-208ENST00000469744 SH3TC1Q8TE82 1336 aa22.53■■□□□ 1.2
MRPL28-208ENST00000469744 ISCA1Q9BUE6 129 aa22.53■■□□□ 1.2
MRPL28-208ENST00000469744 TAF1P21675 1872 aa22.52■■□□□ 1.2
MRPL28-208ENST00000469744 SNED1Q8TER0 1413 aa22.52■■□□□ 1.2
MRPL28-208ENST00000469744 GOLGA2Q08379 1002 aa22.52■■□□□ 1.2
MRPL28-208ENST00000469744 CCDC30Q5VVM6 783 aa22.52■■□□□ 1.2
MRPL28-208ENST00000469744 RIC3Q7Z5B4 369 aa22.52■■□□□ 1.2
MRPL28-208ENST00000469744 RTKN2Q8IZC4 609 aa22.52■■□□□ 1.2
MRPL28-208ENST00000469744 CRAMP1Q96RY5 1269 aa22.52■■□□□ 1.2
MRPL28-208ENST00000469744 RCAN3Q9UKA8 241 aa22.52■■□□□ 1.2
MRPL28-208ENST00000469744 PPEF1O14829 653 aaPredicted RBP22.51■■□□□ 1.19
MRPL28-208ENST00000469744 RTL5Q5HYW3 569 aaPredicted RBP22.51■■□□□ 1.19
MRPL28-208ENST00000469744 HSPA6P17066 643 aa22.5■■□□□ 1.19
MRPL28-208ENST00000469744 FAM89AQ96GI7 184 aa22.5■■□□□ 1.19
MRPL28-208ENST00000469744 ABCC4O15439 1325 aa22.5■■□□□ 1.19
MRPL28-208ENST00000469744 IL16Q14005 1332 aa22.5■■□□□ 1.19
MRPL28-208ENST00000469744 DPY19L2Q6NUT2 758 aa22.49■■□□□ 1.19
MRPL28-208ENST00000469744 FANCIQ9NVI1 1328 aa22.49■■□□□ 1.19
MRPL28-208ENST00000469744 WDR90Q96KV7 1748 aa22.49■■□□□ 1.19
MRPL28-208ENST00000469744 TWISTNBQ3B726 338 aaPredicted RBP22.48■■□□□ 1.19
MRPL28-208ENST00000469744 NCBP3Q53F19 620 aaKnown RBP22.48■■□□□ 1.19
MRPL28-208ENST00000469744 RBM46Q8TBY0 533 aaKnown RBP22.48■■□□□ 1.19
MRPL28-208ENST00000469744 MYD88Q99836 296 aa22.48■■□□□ 1.19
MRPL28-208ENST00000469744 DDNO94850 711 aaPredicted RBP22.47■■□□□ 1.19
MRPL28-208ENST00000469744 RRP1P56182 461 aaKnown RBP22.47■■□□□ 1.19
MRPL28-208ENST00000469744 POTECB2RU33 542 aa22.47■■□□□ 1.19
MRPL28-208ENST00000469744 VEGFAP15692 232 aaPredicted RBP22.47■■□□□ 1.19
MRPL28-208ENST00000469744 IARSP41252 1262 aaKnown RBP22.47■■□□□ 1.19
MRPL28-208ENST00000469744 CDCA7LQ96GN5 454 aa22.47■■□□□ 1.19
MRPL28-208ENST00000469744 COL4A5P29400 1685 aa22.46■■□□□ 1.19
MRPL28-208ENST00000469744 ZNF541Q9H0D2 1346 aa22.46■■□□□ 1.19
MRPL28-208ENST00000469744 CC2D2BQ6DHV5 1058 aa22.46■■□□□ 1.19
MRPL28-208ENST00000469744 PSMD1Q99460 953 aa22.46■■□□□ 1.19
MRPL28-208ENST00000469744 WDR63Q8IWG1 891 aa22.45■■□□□ 1.18
MRPL28-208ENST00000469744 STK31Q9BXU1 1019 aa22.45■■□□□ 1.18
MRPL28-208ENST00000469744 SPINK5Q9NQ38 1064 aaPredicted RBP22.45■■□□□ 1.18
MRPL28-208ENST00000469744 TRIM28Q13263 835 aaKnown RBP22.44■■□□□ 1.18
MRPL28-208ENST00000469744 DDX46Q7L014 1031 aaKnown RBP22.44■■□□□ 1.18
MRPL28-208ENST00000469744 G2E3Q7L622 706 aa22.44■■□□□ 1.18
MRPL28-208ENST00000469744 CHMP4AQ9BY43 222 aa22.44■■□□□ 1.18
MRPL28-208ENST00000469744 TSHZ2Q9NRE2 1034 aa22.44■■□□□ 1.18
MRPL28-208ENST00000469744 MAP3K2Q9Y2U5 619 aa22.44■■□□□ 1.18
MRPL28-208ENST00000469744 COL4A1P02462 1669 aa22.44■■□□□ 1.18
MRPL28-208ENST00000469744 DDX58O95786 925 aaKnown RBP22.43■■□□□ 1.18
MRPL28-208ENST00000469744 TRMT2AQ8IZ69 625 aaKnown RBP22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 110.3 ms