RNA–Protein interactions for RNA: ENST00000469504.1

COL4A3-204, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL4A3, Length 521 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-204ENST00000469504 ZBTB3Q9H5J0 574 aa14.34□□□□□ -0.11
COL4A3-204ENST00000469504 UBN2Q6ZU65 1347 aa14.34□□□□□ -0.11
COL4A3-204ENST00000469504 ABCC12Q96J65 1359 aa14.34□□□□□ -0.11
COL4A3-204ENST00000469504 CAPN15O75808 1086 aa14.33□□□□□ -0.12
COL4A3-204ENST00000469504 NTSR2O95665 410 aa14.33□□□□□ -0.12
COL4A3-204ENST00000469504 EIF2S2P20042 333 aaKnown RBP14.33□□□□□ -0.12
COL4A3-204ENST00000469504 PDIA6Q15084 440 aa14.33□□□□□ -0.12
COL4A3-204ENST00000469504 SUSD4Q5VX71 490 aa14.33□□□□□ -0.12
COL4A3-204ENST00000469504 NUTM1Q86Y26 1132 aa14.33□□□□□ -0.12
COL4A3-204ENST00000469504 JMYQ8N9B5 988 aa14.33□□□□□ -0.12
COL4A3-204ENST00000469504 CRAMP1Q96RY5 1269 aa14.33□□□□□ -0.12
COL4A3-204ENST00000469504 CCDC88AQ3V6T2 1871 aa14.33□□□□□ -0.12
COL4A3-204ENST00000469504 GPTP24298 496 aa14.32□□□□□ -0.12
COL4A3-204ENST00000469504 IARSP41252 1262 aaKnown RBP14.32□□□□□ -0.12
COL4A3-204ENST00000469504 SLC10A5Q5PT55 438 aa14.32□□□□□ -0.12
COL4A3-204ENST00000469504 NLRP3Q96P20 1036 aa14.32□□□□□ -0.12
COL4A3-204ENST00000469504 TMX4Q9H1E5 349 aaPredicted RBP14.32□□□□□ -0.12
COL4A3-204ENST00000469504 PRKRIP1Q9H875 184 aaPredicted RBP14.32□□□□□ -0.12
COL4A3-204ENST00000469504 DDX21Q9NR30 783 aaKnown RBP eCLIP14.32□□□□□ -0.12
COL4A3-204ENST00000469504 NUP98P52948 1817 aa14.31□□□□□ -0.12
COL4A3-204ENST00000469504 DDNO94850 711 aaPredicted RBP14.31□□□□□ -0.12
COL4A3-204ENST00000469504 IFFO2Q5TF58 517 aa14.31□□□□□ -0.12
COL4A3-204ENST00000469504 JDP2Q8WYK2 163 aa14.31□□□□□ -0.12
COL4A3-204ENST00000469504 UTP14AQ9BVJ6 771 aaKnown RBP14.31□□□□□ -0.12
COL4A3-204ENST00000469504 VPS33BQ9H267 617 aa14.31□□□□□ -0.12
COL4A3-204ENST00000469504 SNED1Q8TER0 1413 aa14.31□□□□□ -0.12
COL4A3-204ENST00000469504 FZD9O00144 591 aa14.3□□□□□ -0.12
COL4A3-204ENST00000469504 CALD1Q05682 793 aaKnown RBP14.3□□□□□ -0.12
COL4A3-204ENST00000469504 NEUROD2Q15784 382 aa14.3□□□□□ -0.12
COL4A3-204ENST00000469504 CHADLQ6NUI6 762 aa14.3□□□□□ -0.12
COL4A3-204ENST00000469504 LDHDQ86WU2 507 aa14.3□□□□□ -0.12
COL4A3-204ENST00000469504 CCDC146Q8IYE0 955 aa14.3□□□□□ -0.12
COL4A3-204ENST00000469504 SYNE4Q8N205 404 aa14.3□□□□□ -0.12
COL4A3-204ENST00000469504 CFAP44Q96MT7 982 aa14.3□□□□□ -0.12
COL4A3-204ENST00000469504 ZNF277Q9NRM2 450 aaPredicted RBP14.3□□□□□ -0.12
COL4A3-204ENST00000469504 ADAMTS8Q9UP79 889 aa14.3□□□□□ -0.12
COL4A3-204ENST00000469504 TRIM35Q9UPQ4 493 aa14.3□□□□□ -0.12
COL4A3-204ENST00000469504 CACNA1SQ13698 1873 aa14.29□□□□□ -0.12
COL4A3-204ENST00000469504 COPS6Q7L5N1 327 aa14.29□□□□□ -0.12
COL4A3-204ENST00000469504 PNMA8AQ86V59 439 aaPredicted RBP14.29□□□□□ -0.12
COL4A3-204ENST00000469504 GPC2Q8N158 579 aa14.29□□□□□ -0.12
COL4A3-204ENST00000469504 CHMP4AQ9BY43 222 aa14.29□□□□□ -0.12
COL4A3-204ENST00000469504 PPEF1O14829 653 aaPredicted RBP14.28□□□□□ -0.12
COL4A3-204ENST00000469504 SCN4AP35499 1836 aa14.28□□□□□ -0.12
COL4A3-204ENST00000469504 TCIRG1Q13488 830 aa14.28□□□□□ -0.12
COL4A3-204ENST00000469504 TAF1DQ9H5J8 278 aaPredicted RBP14.28□□□□□ -0.12
COL4A3-204ENST00000469504 DBF4Q9UBU7 674 aaPredicted RBP14.28□□□□□ -0.12
COL4A3-204ENST00000469504 HACL1Q9UJ83 578 aa14.28□□□□□ -0.12
COL4A3-204ENST00000469504 BBOX1O75936 387 aa14.27□□□□□ -0.13
COL4A3-204ENST00000469504 EIF6P56537 245 aaKnown RBP14.27□□□□□ -0.13
COL4A3-204ENST00000469504 PROSER3Q2NL68 480 aa14.27□□□□□ -0.13
COL4A3-204ENST00000469504 HDGFL1Q5TGJ6 251 aa14.27□□□□□ -0.13
COL4A3-204ENST00000469504 TMC4Q7Z404 712 aa14.27□□□□□ -0.13
COL4A3-204ENST00000469504 NLRP10Q86W26 655 aa14.27□□□□□ -0.13
COL4A3-204ENST00000469504 SUPT20HQ8NEM7 779 aa14.27□□□□□ -0.13
COL4A3-204ENST00000469504 XAGE3Q8WTP9 111 aa14.27□□□□□ -0.13
COL4A3-204ENST00000469504 CREBZFQ9NS37 354 aa14.27□□□□□ -0.13
COL4A3-204ENST00000469504 SH3TC1Q8TE82 1336 aa14.26□□□□□ -0.13
COL4A3-204ENST00000469504 SLC4A2P04920 1241 aa14.26□□□□□ -0.13
COL4A3-204ENST00000469504 HTRA3P83110 453 aa14.26□□□□□ -0.13
COL4A3-204ENST00000469504 AIMP1Q12904 312 aaKnown RBP14.26□□□□□ -0.13
COL4A3-204ENST00000469504 OLFM4Q6UX06 510 aa14.26□□□□□ -0.13
COL4A3-204ENST00000469504 PLBD2Q8NHP8 589 aa14.26□□□□□ -0.13
COL4A3-204ENST00000469504 HYPKQ9NX55 129 aa14.26□□□□□ -0.13
COL4A3-204ENST00000469504 ATP6V0A2Q9Y487 856 aa14.26□□□□□ -0.13
COL4A3-204ENST00000469504 LAS1LQ9Y4W2 734 aaKnown RBP14.26□□□□□ -0.13
COL4A3-204ENST00000469504 ZNF541Q9H0D2 1346 aa14.25□□□□□ -0.13
COL4A3-204ENST00000469504 ANXA1P04083 346 aa14.25□□□□□ -0.13
COL4A3-204ENST00000469504 LARGE2Q8N3Y3 721 aa14.25□□□□□ -0.13
COL4A3-204ENST00000469504 IFT57Q9NWB7 429 aa14.25□□□□□ -0.13
COL4A3-204ENST00000469504 CHPF2Q9P2E5 772 aa14.25□□□□□ -0.13
COL4A3-204ENST00000469504 TRMT112Q9UI30 125 aaKnown RBP14.25□□□□□ -0.13
COL4A3-204ENST00000469504 PASKQ96RG2 1323 aa14.24□□□□□ -0.13
COL4A3-204ENST00000469504 ZNF853P0CG23 659 aa14.24□□□□□ -0.13
COL4A3-204ENST00000469504 EPHX2P34913 555 aa14.24□□□□□ -0.13
COL4A3-204ENST00000469504 GNAI1P63096 354 aa14.24□□□□□ -0.13
COL4A3-204ENST00000469504 ANKRD13DQ6ZTN6 518 aa14.24□□□□□ -0.13
COL4A3-204ENST00000469504 DDX46Q7L014 1031 aaKnown RBP14.24□□□□□ -0.13
COL4A3-204ENST00000469504 SP8Q8IXZ3 490 aa14.24□□□□□ -0.13
COL4A3-204ENST00000469504 RTFDC1Q9BY42 306 aaPredicted RBP14.24□□□□□ -0.13
COL4A3-204ENST00000469504 ABCC4O15439 1325 aa14.23□□□□□ -0.13
COL4A3-204ENST00000469504 HSP90B1P14625 803 aaKnown RBP14.23□□□□□ -0.13
COL4A3-204ENST00000469504 LMOD1P29536 600 aaPredicted RBP14.23□□□□□ -0.13
COL4A3-204ENST00000469504 TRIM28Q13263 835 aaKnown RBP14.23□□□□□ -0.13
COL4A3-204ENST00000469504 DUSP27Q5VZP5 1158 aa14.23□□□□□ -0.13
COL4A3-204ENST00000469504 NIM1KQ8IY84 436 aa14.23□□□□□ -0.13
COL4A3-204ENST00000469504 NECTIN2Q92692 538 aa14.23□□□□□ -0.13
COL4A3-204ENST00000469504 SPINK5Q9NQ38 1064 aaPredicted RBP14.23□□□□□ -0.13
COL4A3-204ENST00000469504 ANKRD36CQ5JPF3 1778 aa14.23□□□□□ -0.13
COL4A3-204ENST00000469504 POTEIP0CG38 1075 aa14.22□□□□□ -0.13
COL4A3-204ENST00000469504 POTEJP0CG39 1038 aa14.22□□□□□ -0.13
COL4A3-204ENST00000469504 GRAPQ13588 217 aa14.22□□□□□ -0.13
COL4A3-204ENST00000469504 KRT24Q2M2I5 525 aa14.22□□□□□ -0.13
COL4A3-204ENST00000469504 C3orf67Q6ZVT6 689 aa14.22□□□□□ -0.13
COL4A3-204ENST00000469504 GRAPLQ8TC17 118 aaPredicted RBP14.22□□□□□ -0.13
COL4A3-204ENST00000469504 ISCA1Q9BUE6 129 aa14.22□□□□□ -0.13
COL4A3-204ENST00000469504 MBIPQ9NS73 344 aa14.22□□□□□ -0.13
COL4A3-204ENST00000469504 APAF1O14727 1248 aa14.21□□□□□ -0.13
COL4A3-204ENST00000469504 PPIP5K2O43314 1243 aa14.21□□□□□ -0.13
COL4A3-204ENST00000469504 EAPPQ56P03 285 aaPredicted RBP14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms