RNA–Protein interactions for RNA: ENST00000469479.1

VPS8-219, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 4

Gene VPS8, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-219ENST00000469479 GTF2IP78347 998 aa9.1□□□□□ -0.95
VPS8-219ENST00000469479 PSME1Q06323 249 aa9.1□□□□□ -0.95
VPS8-219ENST00000469479 LCE1DQ5T752 114 aa9.1□□□□□ -0.95
VPS8-219ENST00000469479 CYB5RLQ6IPT4 315 aa9.1□□□□□ -0.95
VPS8-219ENST00000469479 SLC9A9Q8IVB4 645 aa9.1□□□□□ -0.95
VPS8-219ENST00000469479 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.1□□□□□ -0.95
VPS8-219ENST00000469479 EPHA4P54764 986 aa9.09□□□□□ -0.95
VPS8-219ENST00000469479 KCNQ4P56696 695 aa9.09□□□□□ -0.95
VPS8-219ENST00000469479 RAC1P63000 192 aa9.09□□□□□ -0.95
VPS8-219ENST00000469479 MBTPS1Q14703 1052 aa9.09□□□□□ -0.95
VPS8-219ENST00000469479 C1orf53Q5VUE5 145 aa9.09□□□□□ -0.95
VPS8-219ENST00000469479 TXNRD3Q86VQ6 643 aa9.09□□□□□ -0.95
VPS8-219ENST00000469479 RHPN1Q8TCX5 695 aa9.09□□□□□ -0.95
VPS8-219ENST00000469479 LENG1Q96BZ8 264 aaPredicted RBP9.09□□□□□ -0.95
VPS8-219ENST00000469479 IFT140Q96RY7 1462 aa9.08□□□□□ -0.96
VPS8-219ENST00000469479 RSF1Q96T23 1441 aaPredicted RBP9.08□□□□□ -0.96
VPS8-219ENST00000469479 SELPP16109 830 aa9.08□□□□□ -0.96
VPS8-219ENST00000469479 NFATC2IPQ8NCF5 419 aa9.08□□□□□ -0.96
VPS8-219ENST00000469479 CEP63Q96MT8 703 aa9.08□□□□□ -0.96
VPS8-219ENST00000469479 BRD7Q9NPI1 651 aa9.08□□□□□ -0.96
VPS8-219ENST00000469479 KCNH4Q9UQ05 1017 aa9.08□□□□□ -0.96
VPS8-219ENST00000469479 URB2Q14146 1524 aaKnown RBP9.07□□□□□ -0.96
VPS8-219ENST00000469479 A0A0A0MRY4 1105 aa9.07□□□□□ -0.96
VPS8-219ENST00000469479 PIK3CDO00329 1044 aa9.06□□□□□ -0.96
VPS8-219ENST00000469479 SKIP12755 728 aa9.06□□□□□ -0.96
VPS8-219ENST00000469479 TNS4Q8IZW8 715 aa9.06□□□□□ -0.96
VPS8-219ENST00000469479 CHMP3Q9Y3E7 222 aa9.06□□□□□ -0.96
VPS8-219ENST00000469479 EFCC1Q9HA90 598 aa9.05□□□□□ -0.96
VPS8-219ENST00000469479 ARAP1Q96P48 1450 aa9.04□□□□□ -0.96
VPS8-219ENST00000469479 SFI1A8K8P3 1242 aa9.04□□□□□ -0.96
VPS8-219ENST00000469479 HIRAP54198 1017 aaPredicted RBP9.04□□□□□ -0.96
VPS8-219ENST00000469479 PSMA6P60900 246 aaKnown RBP9.04□□□□□ -0.96
VPS8-219ENST00000469479 TBCELQ5QJ74 424 aa9.04□□□□□ -0.96
VPS8-219ENST00000469479 RAB44Q7Z6P3 723 aaPredicted RBP9.04□□□□□ -0.96
VPS8-219ENST00000469479 COL17A1Q9UMD9 1497 aaPredicted RBP9.03□□□□□ -0.96
VPS8-219ENST00000469479 NCOA4Q13772 614 aa9.03□□□□□ -0.96
VPS8-219ENST00000469479 TRIM50Q86XT4 487 aa9.03□□□□□ -0.96
VPS8-219ENST00000469479 BHMTQ93088 406 aa9.03□□□□□ -0.96
VPS8-219ENST00000469479 TP53INP1Q96A56 240 aa9.03□□□□□ -0.96
VPS8-219ENST00000469479 JPH1Q9HDC5 661 aaPredicted RBP9.02□□□□□ -0.97
VPS8-219ENST00000469479 TYRO3Q06418 890 aa9.01□□□□□ -0.97
VPS8-219ENST00000469479 SH3PXD2AQ5TCZ1 1133 aa9.01□□□□□ -0.97
VPS8-219ENST00000469479 HSH2DQ96JZ2 352 aa9.01□□□□□ -0.97
VPS8-219ENST00000469479 UBE2OQ9C0C9 1292 aaKnown RBP9.01□□□□□ -0.97
VPS8-219ENST00000469479 USP21Q9UK80 565 aa9.01□□□□□ -0.97
VPS8-219ENST00000469479 SLC6A14Q9UN76 642 aa9.01□□□□□ -0.97
VPS8-219ENST00000469479 ABCC8Q09428 1581 aa9□□□□□ -0.97
VPS8-219ENST00000469479 POTEAQ6S8J7 498 aa9□□□□□ -0.97
VPS8-219ENST00000469479 SUSD3Q96L08 255 aa9□□□□□ -0.97
VPS8-219ENST00000469479 SSBP4Q9BWG4 385 aaPredicted RBP9□□□□□ -0.97
VPS8-219ENST00000469479 PHACTR1Q9C0D0 580 aa9□□□□□ -0.97
VPS8-219ENST00000469479 HCN4Q9Y3Q4 1203 aa9□□□□□ -0.97
VPS8-219ENST00000469479 ZNF608Q9ULD9 1512 aaPredicted RBP9□□□□□ -0.97
VPS8-219ENST00000469479 TBC1D8BQ0IIM8 1120 aa8.99□□□□□ -0.97
VPS8-219ENST00000469479 HIF1AQ16665 826 aa8.99□□□□□ -0.97
VPS8-219ENST00000469479 SHISA2Q6UWI4 295 aa8.99□□□□□ -0.97
VPS8-219ENST00000469479 FMR1NBQ8N0W7 255 aaPredicted RBP8.99□□□□□ -0.97
VPS8-219ENST00000469479 FMNL2Q96PY5 1086 aa8.99□□□□□ -0.97
VPS8-219ENST00000469479 ALG2Q9H553 416 aa8.99□□□□□ -0.97
VPS8-219ENST00000469479 RNF112Q9ULX5 631 aa8.99□□□□□ -0.97
VPS8-219ENST00000469479 ATP1A2P50993 1020 aa8.98□□□□□ -0.97
VPS8-219ENST00000469479 AFF1P51825 1210 aaKnown RBP8.98□□□□□ -0.97
VPS8-219ENST00000469479 ZNF280CQ8ND82 737 aa8.98□□□□□ -0.97
VPS8-219ENST00000469479 TPCN2Q8NHX9 752 aa8.98□□□□□ -0.97
VPS8-219ENST00000469479 NUDT8Q8WV74 236 aa8.98□□□□□ -0.97
VPS8-219ENST00000469479 IGFLR1Q9H665 355 aa8.98□□□□□ -0.97
VPS8-219ENST00000469479 USP17L5A8MUK1 530 aa8.97□□□□□ -0.97
VPS8-219ENST00000469479 M0R2N6 131 aa8.97□□□□□ -0.97
VPS8-219ENST00000469479 RGS9O75916 674 aaPredicted RBP8.97□□□□□ -0.97
VPS8-219ENST00000469479 PSAPL1Q6NUJ1 521 aa8.97□□□□□ -0.97
VPS8-219ENST00000469479 ILDR2Q71H61 639 aa8.97□□□□□ -0.97
VPS8-219ENST00000469479 DTWD1Q8N5C7 304 aa8.97□□□□□ -0.97
VPS8-219ENST00000469479 TSPAN10Q9H1Z9 355 aaPredicted RBP8.97□□□□□ -0.97
VPS8-219ENST00000469479 EIF4G3O43432 1585 aaKnown RBP8.96□□□□□ -0.97
VPS8-219ENST00000469479 PCSK7Q16549 785 aa8.96□□□□□ -0.98
VPS8-219ENST00000469479 CCDC102BQ68D86 513 aa8.96□□□□□ -0.98
VPS8-219ENST00000469479 WWC1Q8IX03 1113 aa8.96□□□□□ -0.98
VPS8-219ENST00000469479 DMRTC2Q8IXT2 367 aaPredicted RBP8.96□□□□□ -0.98
VPS8-219ENST00000469479 WIZO95785 1651 aa8.95□□□□□ -0.98
VPS8-219ENST00000469479 ZBTB7BO15156 539 aaPredicted RBP8.95□□□□□ -0.98
VPS8-219ENST00000469479 FZD5Q13467 585 aa8.95□□□□□ -0.98
VPS8-219ENST00000469479 BTLAQ7Z6A9 289 aa8.95□□□□□ -0.98
VPS8-219ENST00000469479 DEPDC4Q8N2C3 294 aa8.95□□□□□ -0.98
VPS8-219ENST00000469479 DNAJB12Q9NXW2 375 aaKnown RBP8.95□□□□□ -0.98
VPS8-219ENST00000469479 PNMA5Q96PV4 448 aa8.94□□□□□ -0.98
VPS8-219ENST00000469479 PCMTD2Q9NV79 361 aa8.94□□□□□ -0.98
VPS8-219ENST00000469479 ARID1BQ8NFD5 2236 aaPredicted RBP8.93□□□□□ -0.98
VPS8-219ENST00000469479 PPP1R12BO60237 982 aaPredicted RBP8.93□□□□□ -0.98
VPS8-219ENST00000469479 MCM6Q14566 821 aa8.93□□□□□ -0.98
VPS8-219ENST00000469479 SLC51AQ86UW1 340 aa8.93□□□□□ -0.98
VPS8-219ENST00000469479 FBXO11Q86XK2 927 aa8.93□□□□□ -0.98
VPS8-219ENST00000469479 PLEKHM2Q8IWE5 1019 aa8.93□□□□□ -0.98
VPS8-219ENST00000469479 STAG2Q8N3U4 1231 aa8.93□□□□□ -0.98
VPS8-219ENST00000469479 WFDC12Q8WWY7 111 aa8.93□□□□□ -0.98
VPS8-219ENST00000469479 GSX2Q9BZM3 304 aa8.93□□□□□ -0.98
VPS8-219ENST00000469479 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.93□□□□□ -0.98
VPS8-219ENST00000469479 TOPBP1Q92547 1522 aa8.93□□□□□ -0.98
VPS8-219ENST00000469479 ALDH16A1Q8IZ83 802 aa8.92□□□□□ -0.98
VPS8-219ENST00000469479 LARGE2Q8N3Y3 721 aa8.92□□□□□ -0.98
VPS8-219ENST00000469479 CHD1O14646 1710 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms