RNA–Protein interactions for RNA: ENST00000468963.1

SDCCAG3-209, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 2

Gene SDCCAG3, Length 686 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-209ENST00000468963 PPP1R42Q7Z4L9 355 aa19.37■□□□□ 0.69
SDCCAG3-209ENST00000468963 SYNE4Q8N205 404 aa19.37■□□□□ 0.69
SDCCAG3-209ENST00000468963 KLRG1Q96E93 195 aa19.37■□□□□ 0.69
SDCCAG3-209ENST00000468963 PCNTO95613 3336 aa19.37■□□□□ 0.69
SDCCAG3-209ENST00000468963 CC2D2BQ6DHV5 1058 aa19.36■□□□□ 0.69
SDCCAG3-209ENST00000468963 C3orf67Q6ZVT6 689 aa19.36■□□□□ 0.69
SDCCAG3-209ENST00000468963 NECTIN2Q92692 538 aa19.36■□□□□ 0.69
SDCCAG3-209ENST00000468963 CRAMP1Q96RY5 1269 aa19.36■□□□□ 0.69
SDCCAG3-209ENST00000468963 DDX21Q9NR30 783 aaKnown RBP eCLIP19.36■□□□□ 0.69
SDCCAG3-209ENST00000468963 SNED1Q8TER0 1413 aa19.35■□□□□ 0.69
SDCCAG3-209ENST00000468963 XAGE3Q8WTP9 111 aa19.35■□□□□ 0.69
SDCCAG3-209ENST00000468963 L3MBTL3Q96JM7 780 aaPredicted RBP19.35■□□□□ 0.69
SDCCAG3-209ENST00000468963 PSMD1Q99460 953 aa19.35■□□□□ 0.69
SDCCAG3-209ENST00000468963 FZD9O00144 591 aa19.34■□□□□ 0.69
SDCCAG3-209ENST00000468963 IARSP41252 1262 aaKnown RBP19.34■□□□□ 0.69
SDCCAG3-209ENST00000468963 JMYQ8N9B5 988 aa19.34■□□□□ 0.69
SDCCAG3-209ENST00000468963 RPGRQ92834 1020 aaKnown RBP19.34■□□□□ 0.69
SDCCAG3-209ENST00000468963 RBM17Q96I25 401 aaKnown RBP19.34■□□□□ 0.69
SDCCAG3-209ENST00000468963 UTP14AQ9BVJ6 771 aaKnown RBP19.34■□□□□ 0.69
SDCCAG3-209ENST00000468963 LAS1LQ9Y4W2 734 aaKnown RBP19.34■□□□□ 0.69
SDCCAG3-209ENST00000468963 AIMP1Q12904 312 aaKnown RBP19.33■□□□□ 0.68
SDCCAG3-209ENST00000468963 TCIRG1Q13488 830 aa19.33■□□□□ 0.68
SDCCAG3-209ENST00000468963 CFAP44Q96MT7 982 aa19.33■□□□□ 0.68
SDCCAG3-209ENST00000468963 NLRP3Q96P20 1036 aa19.33■□□□□ 0.68
SDCCAG3-209ENST00000468963 POTEIP0CG38 1075 aa19.32■□□□□ 0.68
SDCCAG3-209ENST00000468963 POTEJP0CG39 1038 aa19.32■□□□□ 0.68
SDCCAG3-209ENST00000468963 GRIPAP1Q4V328 841 aa19.32■□□□□ 0.68
SDCCAG3-209ENST00000468963 HSP90AB3PQ58FF7 597 aa19.32■□□□□ 0.68
SDCCAG3-209ENST00000468963 CHADLQ6NUI6 762 aa19.32■□□□□ 0.68
SDCCAG3-209ENST00000468963 NLRP10Q86W26 655 aa19.32■□□□□ 0.68
SDCCAG3-209ENST00000468963 ZNF541Q9H0D2 1346 aa19.31■□□□□ 0.68
SDCCAG3-209ENST00000468963 HOXB7P09629 217 aa19.31■□□□□ 0.68
SDCCAG3-209ENST00000468963 IFFO2Q5TF58 517 aa19.31■□□□□ 0.68
SDCCAG3-209ENST00000468963 TAF1DQ9H5J8 278 aaPredicted RBP19.31■□□□□ 0.68
SDCCAG3-209ENST00000468963 IQCA1LA6NCM1 817 aa19.3■□□□□ 0.68
SDCCAG3-209ENST00000468963 ZNF853P0CG23 659 aa19.3■□□□□ 0.68
SDCCAG3-209ENST00000468963 SLC51AQ86UW1 340 aa19.3■□□□□ 0.68
SDCCAG3-209ENST00000468963 CHPF2Q9P2E5 772 aa19.3■□□□□ 0.68
SDCCAG3-209ENST00000468963 RNF123Q5XPI4 1314 aa19.29■□□□□ 0.68
SDCCAG3-209ENST00000468963 APAF1O14727 1248 aa19.29■□□□□ 0.68
SDCCAG3-209ENST00000468963 PPEF1O14829 653 aaPredicted RBP19.28■□□□□ 0.68
SDCCAG3-209ENST00000468963 HDGFL1Q5TGJ6 251 aa19.28■□□□□ 0.68
SDCCAG3-209ENST00000468963 DUSP27Q5VZP5 1158 aa19.28■□□□□ 0.68
SDCCAG3-209ENST00000468963 MBIPQ9NS73 344 aa19.28■□□□□ 0.68
SDCCAG3-209ENST00000468963 TCERG1O14776 1098 aaKnown RBP19.27■□□□□ 0.68
SDCCAG3-209ENST00000468963 HCLS1P14317 486 aaPredicted RBP19.27■□□□□ 0.68
SDCCAG3-209ENST00000468963 ANKRD13DQ6ZTN6 518 aa19.27■□□□□ 0.68
SDCCAG3-209ENST00000468963 LDHDQ86WU2 507 aa19.27■□□□□ 0.68
SDCCAG3-209ENST00000468963 PLBD2Q8NHP8 589 aa19.27■□□□□ 0.68
SDCCAG3-209ENST00000468963 JDP2Q8WYK2 163 aa19.27■□□□□ 0.68
SDCCAG3-209ENST00000468963 DBF4Q9UBU7 674 aaPredicted RBP19.27■□□□□ 0.68
SDCCAG3-209ENST00000468963 TRMT112Q9UI30 125 aaKnown RBP19.27■□□□□ 0.68
SDCCAG3-209ENST00000468963 ATP6V0A2Q9Y487 856 aa19.27■□□□□ 0.68
SDCCAG3-209ENST00000468963 SCN4AP35499 1836 aa19.27■□□□□ 0.68
SDCCAG3-209ENST00000468963 BBOX1O75936 387 aa19.26■□□□□ 0.67
SDCCAG3-209ENST00000468963 GPC2Q8N158 579 aa19.26■□□□□ 0.67
SDCCAG3-209ENST00000468963 ISCA1Q9BUE6 129 aa19.26■□□□□ 0.67
SDCCAG3-209ENST00000468963 HACL1Q9UJ83 578 aa19.26■□□□□ 0.67
SDCCAG3-209ENST00000468963 ABCC4O15439 1325 aa19.25■□□□□ 0.67
SDCCAG3-209ENST00000468963 SH3TC1Q8TE82 1336 aa19.25■□□□□ 0.67
SDCCAG3-209ENST00000468963 COL4A5P29400 1685 aa19.24■□□□□ 0.67
SDCCAG3-209ENST00000468963 ITGBL1O95965 494 aaPredicted RBP19.24■□□□□ 0.67
SDCCAG3-209ENST00000468963 EPHX2P34913 555 aa19.24■□□□□ 0.67
SDCCAG3-209ENST00000468963 SP8Q8IXZ3 490 aa19.24■□□□□ 0.67
SDCCAG3-209ENST00000468963 LARGE2Q8N3Y3 721 aa19.24■□□□□ 0.67
SDCCAG3-209ENST00000468963 VPS33BQ9H267 617 aa19.24■□□□□ 0.67
SDCCAG3-209ENST00000468963 IFT57Q9NWB7 429 aa19.24■□□□□ 0.67
SDCCAG3-209ENST00000468963 HYPKQ9NX55 129 aa19.24■□□□□ 0.67
SDCCAG3-209ENST00000468963 PASKQ96RG2 1323 aa19.24■□□□□ 0.67
SDCCAG3-209ENST00000468963 EIF6P56537 245 aaKnown RBP19.23■□□□□ 0.67
SDCCAG3-209ENST00000468963 GNAI1P63096 354 aa19.23■□□□□ 0.67
SDCCAG3-209ENST00000468963 RTFDC1Q9BY42 306 aaPredicted RBP19.23■□□□□ 0.67
SDCCAG3-209ENST00000468963 CREBZFQ9NS37 354 aa19.23■□□□□ 0.67
SDCCAG3-209ENST00000468963 ANKRD36CQ5JPF3 1778 aa19.22■□□□□ 0.67
SDCCAG3-209ENST00000468963 TRIM28Q13263 835 aaKnown RBP19.22■□□□□ 0.67
SDCCAG3-209ENST00000468963 PNMA8AQ86V59 439 aaPredicted RBP19.22■□□□□ 0.67
SDCCAG3-209ENST00000468963 TMX4Q9H1E5 349 aaPredicted RBP19.22■□□□□ 0.67
SDCCAG3-209ENST00000468963 ATP5J2-PTCD1G3V325 749 aa19.21■□□□□ 0.67
SDCCAG3-209ENST00000468963 CALD1Q05682 793 aaKnown RBP19.21■□□□□ 0.67
SDCCAG3-209ENST00000468963 CCDC184Q52MB2 194 aa19.21■□□□□ 0.67
SDCCAG3-209ENST00000468963 EAPPQ56P03 285 aaPredicted RBP19.21■□□□□ 0.67
SDCCAG3-209ENST00000468963 DDX46Q7L014 1031 aaKnown RBP19.21■□□□□ 0.67
SDCCAG3-209ENST00000468963 ZNF428Q96B54 188 aa19.21■□□□□ 0.67
SDCCAG3-209ENST00000468963 GJA3Q9Y6H8 435 aa19.21■□□□□ 0.67
SDCCAG3-209ENST00000468963 GRAPQ13588 217 aa19.2■□□□□ 0.66
SDCCAG3-209ENST00000468963 SF3B3Q15393 1217 aaKnown RBP19.2■□□□□ 0.66
SDCCAG3-209ENST00000468963 C8orf58Q8NAV2 365 aa19.2■□□□□ 0.66
SDCCAG3-209ENST00000468963 GRAPLQ8TC17 118 aaPredicted RBP19.2■□□□□ 0.66
SDCCAG3-209ENST00000468963 FAM89AQ96GI7 184 aa19.2■□□□□ 0.66
SDCCAG3-209ENST00000468963 CLEC11AQ9Y240 323 aa19.2■□□□□ 0.66
SDCCAG3-209ENST00000468963 ELL2O00472 640 aaPredicted RBP19.19■□□□□ 0.66
SDCCAG3-209ENST00000468963 PPIP5K2O43314 1243 aa19.19■□□□□ 0.66
SDCCAG3-209ENST00000468963 AOC3Q16853 763 aa19.19■□□□□ 0.66
SDCCAG3-209ENST00000468963 NIM1KQ8IY84 436 aa19.19■□□□□ 0.66
SDCCAG3-209ENST00000468963 MPNDQ8N594 471 aa19.19■□□□□ 0.66
SDCCAG3-209ENST00000468963 SUPT20HQ8NEM7 779 aa19.19■□□□□ 0.66
SDCCAG3-209ENST00000468963 PHAXQ9H814 394 aaKnown RBP19.19■□□□□ 0.66
SDCCAG3-209ENST00000468963 SCNN1DP51172 638 aa19.18■□□□□ 0.66
SDCCAG3-209ENST00000468963 DPP8Q6V1X1 898 aaPredicted RBP19.18■□□□□ 0.66
SDCCAG3-209ENST00000468963 CNTROBQ8N137 903 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 620.1 ms