RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 ELOA3Q8NG57 546 aa9.58□□□□□ -0.88
LSM5-209ENST00000468872 FAM200AQ8TCP9 573 aa9.58□□□□□ -0.88
LSM5-209ENST00000468872 MDFIQ99750 246 aa9.58□□□□□ -0.88
LSM5-209ENST00000468872 ITGB2P05107 769 aa9.57□□□□□ -0.88
LSM5-209ENST00000468872 WEE1P30291 646 aa9.57□□□□□ -0.88
LSM5-209ENST00000468872 SUV39H2Q9H5I1 410 aa9.57□□□□□ -0.88
LSM5-209ENST00000468872 KCNH4Q9UQ05 1017 aa9.57□□□□□ -0.88
LSM5-209ENST00000468872 PIK3R2O00459 728 aa9.56□□□□□ -0.88
LSM5-209ENST00000468872 RAB44Q7Z6P3 723 aaPredicted RBP9.56□□□□□ -0.88
LSM5-209ENST00000468872 NOVA2Q9UNW9 492 aaKnown RBP9.56□□□□□ -0.88
LSM5-209ENST00000468872 NEUROD1Q13562 356 aa9.55□□□□□ -0.88
LSM5-209ENST00000468872 ALYREFQ86V81 257 aaKnown RBP9.55□□□□□ -0.88
LSM5-209ENST00000468872 BCS1LQ9Y276 419 aa9.55□□□□□ -0.88
LSM5-209ENST00000468872 KRBA1A5PL33 1030 aa9.54□□□□□ -0.88
LSM5-209ENST00000468872 ADARB2-AS1A8MUL3 147 aa9.54□□□□□ -0.88
LSM5-209ENST00000468872 FOXO3O43524 673 aa9.54□□□□□ -0.88
LSM5-209ENST00000468872 ALAS2P22557 587 aa9.54□□□□□ -0.88
LSM5-209ENST00000468872 IER5Q5VY09 327 aa9.54□□□□□ -0.88
LSM5-209ENST00000468872 TNFRSF25Q93038 417 aa9.54□□□□□ -0.88
LSM5-209ENST00000468872 TGFBR3LH3BV60 316 aa9.53□□□□□ -0.88
LSM5-209ENST00000468872 QTRT2Q9H974 415 aaKnown RBP9.53□□□□□ -0.88
LSM5-209ENST00000468872 MSTNO14793 375 aa9.52□□□□□ -0.89
LSM5-209ENST00000468872 SPOCK3Q9BQ16 436 aa9.52□□□□□ -0.89
LSM5-209ENST00000468872 NOP53Q9NZM5 478 aaKnown RBP9.52□□□□□ -0.89
LSM5-209ENST00000468872 KLK14Q9P0G3 267 aa9.52□□□□□ -0.89
LSM5-209ENST00000468872 DMGDHQ9UI17 866 aaKnown RBP9.52□□□□□ -0.89
LSM5-209ENST00000468872 ZMIZ1Q9ULJ6 1067 aa9.52□□□□□ -0.89
LSM5-209ENST00000468872 SRPK2P78362 688 aaKnown RBP9.51□□□□□ -0.89
LSM5-209ENST00000468872 BHMTQ93088 406 aa9.51□□□□□ -0.89
LSM5-209ENST00000468872 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.5□□□□□ -0.89
LSM5-209ENST00000468872 ADH7P40394 386 aa9.5□□□□□ -0.89
LSM5-209ENST00000468872 DGKZQ13574 1117 aa9.5□□□□□ -0.89
LSM5-209ENST00000468872 ELOAQ14241 798 aaKnown RBP9.5□□□□□ -0.89
LSM5-209ENST00000468872 VTI1AQ96AJ9 217 aa9.5□□□□□ -0.89
LSM5-209ENST00000468872 TRIM11Q96F44 468 aa9.5□□□□□ -0.89
LSM5-209ENST00000468872 ACIN1Q9UKV3 1341 aaKnown RBP9.5□□□□□ -0.89
LSM5-209ENST00000468872 PROCP04070 461 aa9.49□□□□□ -0.89
LSM5-209ENST00000468872 SWI5Q1ZZU3 235 aa9.49□□□□□ -0.89
LSM5-209ENST00000468872 STARD13Q9Y3M8 1113 aa9.49□□□□□ -0.89
LSM5-209ENST00000468872 STK32AQ8WU08 396 aa9.48□□□□□ -0.89
LSM5-209ENST00000468872 MYO19Q96H55 970 aa9.48□□□□□ -0.89
LSM5-209ENST00000468872 PRIMPOLQ96LW4 560 aa9.48□□□□□ -0.89
LSM5-209ENST00000468872 GSX2Q9BZM3 304 aa9.48□□□□□ -0.89
LSM5-209ENST00000468872 M0R082 166 aa9.47□□□□□ -0.89
LSM5-209ENST00000468872 GRNP28799 593 aaKnown RBP9.47□□□□□ -0.89
LSM5-209ENST00000468872 INPP5BP32019 993 aa9.47□□□□□ -0.89
LSM5-209ENST00000468872 IDH3AP50213 366 aa9.47□□□□□ -0.89
LSM5-209ENST00000468872 FAM69CQ0P6D2 419 aa9.47□□□□□ -0.89
LSM5-209ENST00000468872 FKBP5Q13451 457 aaPredicted RBP9.47□□□□□ -0.89
LSM5-209ENST00000468872 SUZ12Q15022 739 aaKnown RBP9.47□□□□□ -0.89
LSM5-209ENST00000468872 C11orf91Q3C1V1 193 aa9.47□□□□□ -0.89
LSM5-209ENST00000468872 ZNF417Q8TAU3 575 aa9.47□□□□□ -0.89
LSM5-209ENST00000468872 ZNF587Q96SQ5 575 aaPredicted RBP9.47□□□□□ -0.89
LSM5-209ENST00000468872 PLVAPQ9BX97 442 aa9.47□□□□□ -0.89
LSM5-209ENST00000468872 EFCC1Q9HA90 598 aa9.47□□□□□ -0.89
LSM5-209ENST00000468872 PRMT3O60678 531 aa9.46□□□□□ -0.9
LSM5-209ENST00000468872 PPP1R15AO75807 674 aaPredicted RBP9.46□□□□□ -0.9
LSM5-209ENST00000468872 ALBP02768 609 aa9.46□□□□□ -0.9
LSM5-209ENST00000468872 EPB42P16452 691 aa9.46□□□□□ -0.9
LSM5-209ENST00000468872 CCINQ13939 588 aa9.46□□□□□ -0.9
LSM5-209ENST00000468872 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.46□□□□□ -0.9
LSM5-209ENST00000468872 LRFN2Q9ULH4 789 aa9.46□□□□□ -0.9
LSM5-209ENST00000468872 ATG7O95352 703 aa9.45□□□□□ -0.9
LSM5-209ENST00000468872 TBC1D8BQ0IIM8 1120 aa9.45□□□□□ -0.9
LSM5-209ENST00000468872 OCLNQ16625 522 aa9.45□□□□□ -0.9
LSM5-209ENST00000468872 MICALL1Q8N3F8 863 aa9.45□□□□□ -0.9
LSM5-209ENST00000468872 PNMA5Q96PV4 448 aa9.45□□□□□ -0.9
LSM5-209ENST00000468872 UBE2OQ9C0C9 1292 aaKnown RBP9.45□□□□□ -0.9
LSM5-209ENST00000468872 PRDM6Q9NQX0 595 aa9.45□□□□□ -0.9
LSM5-209ENST00000468872 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.45□□□□□ -0.9
LSM5-209ENST00000468872 MICAL2O94851 1124 aa9.44□□□□□ -0.9
LSM5-209ENST00000468872 NFKB1P19838 968 aa9.44□□□□□ -0.9
LSM5-209ENST00000468872 ARSDP51689 593 aa9.44□□□□□ -0.9
LSM5-209ENST00000468872 COL9A3Q14050 684 aaPredicted RBP9.44□□□□□ -0.9
LSM5-209ENST00000468872 C8orf86Q6ZUL3 223 aa9.44□□□□□ -0.9
LSM5-209ENST00000468872 RETREG2Q8NC44 543 aa9.44□□□□□ -0.9
LSM5-209ENST00000468872 IGFLR1Q9H665 355 aa9.44□□□□□ -0.9
LSM5-209ENST00000468872 C1QTNF9BB2RNN3 333 aa9.43□□□□□ -0.9
LSM5-209ENST00000468872 PDIA4P13667 645 aaKnown RBP9.43□□□□□ -0.9
LSM5-209ENST00000468872 TMEM164Q5U3C3 297 aa9.43□□□□□ -0.9
LSM5-209ENST00000468872 C20orf204Q6ZNR8 217 aa9.43□□□□□ -0.9
LSM5-209ENST00000468872 CD163Q86VB7 1156 aa9.43□□□□□ -0.9
LSM5-209ENST00000468872 PBXIP1Q96AQ6 731 aa9.43□□□□□ -0.9
LSM5-209ENST00000468872 SLC6A14Q9UN76 642 aa9.43□□□□□ -0.9
LSM5-209ENST00000468872 SPATA31C1P0DKV0 1188 aa9.42□□□□□ -0.9
LSM5-209ENST00000468872 COX20Q5RI15 118 aa9.42□□□□□ -0.9
LSM5-209ENST00000468872 IFT43Q96FT9 208 aa9.42□□□□□ -0.9
LSM5-209ENST00000468872 DNAJB12Q9NXW2 375 aaKnown RBP9.42□□□□□ -0.9
LSM5-209ENST00000468872 SPDYE3A6NKU9 549 aa9.41□□□□□ -0.9
LSM5-209ENST00000468872 CHRNA4P43681 627 aa9.41□□□□□ -0.9
LSM5-209ENST00000468872 OPLAHO14841 1288 aa9.4□□□□□ -0.9
LSM5-209ENST00000468872 NID1P14543 1247 aa9.4□□□□□ -0.9
LSM5-209ENST00000468872 TREML1Q86YW5 311 aa9.4□□□□□ -0.9
LSM5-209ENST00000468872 C11orf16Q9NQ32 467 aa9.4□□□□□ -0.9
LSM5-209ENST00000468872 CXXC1Q9P0U4 656 aaPredicted RBP9.4□□□□□ -0.9
LSM5-209ENST00000468872 LILRB5O75023 590 aa9.39□□□□□ -0.91
LSM5-209ENST00000468872 MAP3K6O95382 1288 aa9.39□□□□□ -0.91
LSM5-209ENST00000468872 BAG6P46379 1132 aa9.39□□□□□ -0.91
LSM5-209ENST00000468872 TRIM26Q12899 539 aaPredicted RBP9.39□□□□□ -0.91
LSM5-209ENST00000468872 KRT25Q7Z3Z0 450 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms