RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 GPBP1L1Q9HC44 474 aaPredicted RBP18.69■□□□□ 0.58
COL27A1-203ENST00000468565 CACNA1FO60840 1977 aa18.69■□□□□ 0.58
COL27A1-203ENST00000468565 NUTM1Q86Y26 1132 aa18.68■□□□□ 0.58
COL27A1-203ENST00000468565 RNF123Q5XPI4 1314 aa18.68■□□□□ 0.58
COL27A1-203ENST00000468565 LAMB2P55268 1798 aa18.68■□□□□ 0.58
COL27A1-203ENST00000468565 ERFEQ4G0M1 354 aa18.68■□□□□ 0.58
COL27A1-203ENST00000468565 PRPF40BQ6NWY9 871 aaKnown RBP18.68■□□□□ 0.58
COL27A1-203ENST00000468565 C8orf58Q8NAV2 365 aa18.68■□□□□ 0.58
COL27A1-203ENST00000468565 SUPT16HQ9Y5B9 1047 aaKnown RBP18.68■□□□□ 0.58
COL27A1-203ENST00000468565 C21orf2O43822 256 aa18.67■□□□□ 0.58
COL27A1-203ENST00000468565 RASSF7Q02833 373 aa18.67■□□□□ 0.58
COL27A1-203ENST00000468565 TCIRG1Q13488 830 aa18.67■□□□□ 0.58
COL27A1-203ENST00000468565 CRY2Q49AN0 593 aa18.67■□□□□ 0.58
COL27A1-203ENST00000468565 SOGA3Q5TF21 947 aa18.67■□□□□ 0.58
COL27A1-203ENST00000468565 PLBD2Q8NHP8 589 aa18.67■□□□□ 0.58
COL27A1-203ENST00000468565 RNF181Q9P0P0 153 aa18.67■□□□□ 0.58
COL27A1-203ENST00000468565 LMNB1P20700 586 aa18.66■□□□□ 0.58
COL27A1-203ENST00000468565 ZC3H4Q9UPT8 1303 aaKnown RBP18.66■□□□□ 0.58
COL27A1-203ENST00000468565 SENP3-EIF4A1A0A087X0R7 540 aa18.66■□□□□ 0.58
COL27A1-203ENST00000468565 NFKBIEO00221 500 aa18.66■□□□□ 0.58
COL27A1-203ENST00000468565 ELL2O00472 640 aaPredicted RBP18.66■□□□□ 0.58
COL27A1-203ENST00000468565 ANKRD13DQ6ZTN6 518 aa18.66■□□□□ 0.58
COL27A1-203ENST00000468565 FAM9BQ8IZU0 186 aa18.66■□□□□ 0.58
COL27A1-203ENST00000468565 ZNF526Q8TF50 670 aaPredicted RBP18.66■□□□□ 0.58
COL27A1-203ENST00000468565 UTP14AQ9BVJ6 771 aaKnown RBP18.66■□□□□ 0.58
COL27A1-203ENST00000468565 ALDH1B1P30837 517 aa18.65■□□□□ 0.58
COL27A1-203ENST00000468565 NLRP10Q86W26 655 aa18.65■□□□□ 0.58
COL27A1-203ENST00000468565 WDR63Q8IWG1 891 aa18.65■□□□□ 0.58
COL27A1-203ENST00000468565 LTBP3Q9NS15 1303 aa18.65■□□□□ 0.58
COL27A1-203ENST00000468565 TSR2Q969E8 191 aaKnown RBP18.64■□□□□ 0.58
COL27A1-203ENST00000468565 SLC10A5Q5PT55 438 aa18.64■□□□□ 0.57
COL27A1-203ENST00000468565 CCDC30Q5VVM6 783 aa18.64■□□□□ 0.57
COL27A1-203ENST00000468565 C7orf43Q8WVR3 580 aa18.64■□□□□ 0.57
COL27A1-203ENST00000468565 ZNF219Q9P2Y4 722 aaPredicted RBP18.64■□□□□ 0.57
COL27A1-203ENST00000468565 DDX60Q8IY21 1712 aaKnown RBP18.63■□□□□ 0.57
COL27A1-203ENST00000468565 PRELPP51888 382 aa18.63■□□□□ 0.57
COL27A1-203ENST00000468565 C1QTNF8P60827 252 aa18.63■□□□□ 0.57
COL27A1-203ENST00000468565 TSPYL6Q8N831 410 aa18.63■□□□□ 0.57
COL27A1-203ENST00000468565 HOXA10P31260 410 aaPredicted RBP18.62■□□□□ 0.57
COL27A1-203ENST00000468565 CCDC93Q567U6 631 aa18.62■□□□□ 0.57
COL27A1-203ENST00000468565 RPGRQ92834 1020 aaKnown RBP18.62■□□□□ 0.57
COL27A1-203ENST00000468565 ISCA1Q9BUE6 129 aa18.62■□□□□ 0.57
COL27A1-203ENST00000468565 TAOK3Q9H2K8 898 aa18.62■□□□□ 0.57
COL27A1-203ENST00000468565 GOLGA2Q08379 1002 aa18.61■□□□□ 0.57
COL27A1-203ENST00000468565 PHAXQ9H814 394 aaKnown RBP18.61■□□□□ 0.57
COL27A1-203ENST00000468565 SALL2Q9Y467 1007 aaPredicted RBP18.61■□□□□ 0.57
COL27A1-203ENST00000468565 NLRP3Q96P20 1036 aa18.61■□□□□ 0.57
COL27A1-203ENST00000468565 FANCIQ9NVI1 1328 aa18.6■□□□□ 0.57
COL27A1-203ENST00000468565 TWISTNBQ3B726 338 aaPredicted RBP18.6■□□□□ 0.57
COL27A1-203ENST00000468565 RBM17Q96I25 401 aaKnown RBP18.6■□□□□ 0.57
COL27A1-203ENST00000468565 CRAMP1Q96RY5 1269 aa18.6■□□□□ 0.57
COL27A1-203ENST00000468565 TRMT112Q9UI30 125 aaKnown RBP18.6■□□□□ 0.57
COL27A1-203ENST00000468565 KDM2BQ8NHM5 1336 aa18.6■□□□□ 0.57
COL27A1-203ENST00000468565 SH3TC1Q8TE82 1336 aa18.6■□□□□ 0.57
COL27A1-203ENST00000468565 KIF3CO14782 793 aa18.59■□□□□ 0.57
COL27A1-203ENST00000468565 TRIM28Q13263 835 aaKnown RBP18.59■□□□□ 0.57
COL27A1-203ENST00000468565 C3orf67Q6ZVT6 689 aa18.59■□□□□ 0.57
COL27A1-203ENST00000468565 RIC3Q7Z5B4 369 aa18.59■□□□□ 0.57
COL27A1-203ENST00000468565 DDX58O95786 925 aaKnown RBP18.58■□□□□ 0.56
COL27A1-203ENST00000468565 HNRNPUQ00839 825 aaKnown RBP eCLIP18.58■□□□□ 0.56
COL27A1-203ENST00000468565 RTKN2Q8IZC4 609 aa18.58■□□□□ 0.56
COL27A1-203ENST00000468565 SNED1Q8TER0 1413 aa18.58■□□□□ 0.56
COL27A1-203ENST00000468565 STK31Q9BXU1 1019 aa18.58■□□□□ 0.56
COL27A1-203ENST00000468565 CC2D2BQ6DHV5 1058 aa18.57■□□□□ 0.56
COL27A1-203ENST00000468565 ATP5J2-PTCD1G3V325 749 aa18.57■□□□□ 0.56
COL27A1-203ENST00000468565 FKBP4Q02790 459 aaKnown RBP eCLIP18.57■□□□□ 0.56
COL27A1-203ENST00000468565 NEFLP07196 543 aa18.56■□□□□ 0.56
COL27A1-203ENST00000468565 NMRK2Q9NPI5 230 aa18.56■□□□□ 0.56
COL27A1-203ENST00000468565 TAF1P21675 1872 aa18.56■□□□□ 0.56
COL27A1-203ENST00000468565 GRIPAP1Q4V328 841 aa18.55■□□□□ 0.56
COL27A1-203ENST00000468565 SYNE4Q8N205 404 aa18.55■□□□□ 0.56
COL27A1-203ENST00000468565 WDR90Q96KV7 1748 aa18.55■□□□□ 0.56
COL27A1-203ENST00000468565 ZNF521Q96K83 1311 aa18.55■□□□□ 0.56
COL27A1-203ENST00000468565 GLTPD2A6NH11 291 aa18.55■□□□□ 0.56
COL27A1-203ENST00000468565 HCLS1P14317 486 aaPredicted RBP18.55■□□□□ 0.56
COL27A1-203ENST00000468565 OLFM4Q6UX06 510 aa18.55■□□□□ 0.56
COL27A1-203ENST00000468565 MYH16Q9H6N6 1097 aa18.55■□□□□ 0.56
COL27A1-203ENST00000468565 PPEF1O14829 653 aaPredicted RBP18.54■□□□□ 0.56
COL27A1-203ENST00000468565 PSMD1Q99460 953 aa18.54■□□□□ 0.56
COL27A1-203ENST00000468565 MYD88Q99836 296 aa18.54■□□□□ 0.56
COL27A1-203ENST00000468565 METTL22Q9BUU2 404 aaPredicted RBP18.54■□□□□ 0.56
COL27A1-203ENST00000468565 SPINK5Q9NQ38 1064 aaPredicted RBP18.54■□□□□ 0.56
COL27A1-203ENST00000468565 ABCC4O15439 1325 aa18.53■□□□□ 0.56
COL27A1-203ENST00000468565 EXOSC9Q06265 439 aaKnown RBP18.53■□□□□ 0.56
COL27A1-203ENST00000468565 KSR2Q6VAB6 950 aa18.53■□□□□ 0.56
COL27A1-203ENST00000468565 FAM89AQ96GI7 184 aa18.53■□□□□ 0.56
COL27A1-203ENST00000468565 MYH3P11055 1940 aa18.53■□□□□ 0.56
COL27A1-203ENST00000468565 VAMP4O75379 141 aa18.53■□□□□ 0.56
COL27A1-203ENST00000468565 CCDC191Q8NCU4 936 aa18.53■□□□□ 0.56
COL27A1-203ENST00000468565 MAP3K2Q9Y2U5 619 aa18.53■□□□□ 0.56
COL27A1-203ENST00000468565 LRRC37AA6NMS7 1700 aa18.52■□□□□ 0.56
COL27A1-203ENST00000468565 DPY19L2Q6NUT2 758 aa18.52■□□□□ 0.56
COL27A1-203ENST00000468565 ZBTB38Q8NAP3 1195 aaPredicted RBP18.52■□□□□ 0.56
COL27A1-203ENST00000468565 TCERG1O14776 1098 aaKnown RBP18.51■□□□□ 0.55
COL27A1-203ENST00000468565 TOMM70O94826 608 aa18.51■□□□□ 0.55
COL27A1-203ENST00000468565 SF3B3Q15393 1217 aaKnown RBP18.51■□□□□ 0.55
COL27A1-203ENST00000468565 DDX46Q7L014 1031 aaKnown RBP18.51■□□□□ 0.55
COL27A1-203ENST00000468565 PI4KAP2A4QPH2 592 aa18.51■□□□□ 0.55
COL27A1-203ENST00000468565 BBOX1O75936 387 aa18.51■□□□□ 0.55
COL27A1-203ENST00000468565 HSP90B1P14625 803 aaKnown RBP18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms