RNA–Protein interactions for RNA: ENST00000467742.1

TRIM27-204, Transcript of tripartite motif containing 27, humanhuman

TSL 2

Gene TRIM27, Length 541 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-204ENST00000467742 IRF5Q13568 498 aa7.09□□□□□ -1.27
TRIM27-204ENST00000467742 NBPF1Q3BBV0 1214 aa7.09□□□□□ -1.27
TRIM27-204ENST00000467742 CCDC116Q8IYX3 515 aa7.09□□□□□ -1.27
TRIM27-204ENST00000467742 OCSTAMPQ9BR26 566 aa7.09□□□□□ -1.27
TRIM27-204ENST00000467742 MSH6P52701 1360 aa7.08□□□□□ -1.28
TRIM27-204ENST00000467742 SNRPBP14678 240 aaKnown RBP7.08□□□□□ -1.28
TRIM27-204ENST00000467742 MCCD1P59942 119 aaPredicted RBP7.08□□□□□ -1.28
TRIM27-204ENST00000467742 NBPF20Q3BBV1 942 aa7.08□□□□□ -1.28
TRIM27-204ENST00000467742 MRPL14Q6P1L8 145 aaKnown RBP7.08□□□□□ -1.28
TRIM27-204ENST00000467742 ITPKCQ96DU7 683 aa7.08□□□□□ -1.28
TRIM27-204ENST00000467742 STK26Q9P289 416 aa7.08□□□□□ -1.28
TRIM27-204ENST00000467742 EMILIN1Q9Y6C2 1016 aa7.08□□□□□ -1.28
TRIM27-204ENST00000467742 C1orf167Q5SNV9 1468 aa7.08□□□□□ -1.28
TRIM27-204ENST00000467742 COL22A1Q8NFW1 1626 aaPredicted RBP7.08□□□□□ -1.28
TRIM27-204ENST00000467742 PHRF1Q9P1Y6 1649 aaKnown RBP7.08□□□□□ -1.28
TRIM27-204ENST00000467742 CLSPNQ9HAW4 1339 aa7.07□□□□□ -1.28
TRIM27-204ENST00000467742 UBAP1LF5GYI3 381 aa7.07□□□□□ -1.28
TRIM27-204ENST00000467742 EIF4G2P78344 907 aaKnown RBP eCLIP7.07□□□□□ -1.28
TRIM27-204ENST00000467742 SCARF1Q14162 830 aa7.07□□□□□ -1.28
TRIM27-204ENST00000467742 WAPLQ7Z5K2 1190 aa7.07□□□□□ -1.28
TRIM27-204ENST00000467742 ADAM32Q8TC27 787 aa7.07□□□□□ -1.28
TRIM27-204ENST00000467742 MED1Q15648 1581 aaPredicted RBP7.07□□□□□ -1.28
TRIM27-204ENST00000467742 ROCK2O75116 1388 aaKnown RBP7.07□□□□□ -1.28
TRIM27-204ENST00000467742 PXDNQ92626 1479 aa7.06□□□□□ -1.28
TRIM27-204ENST00000467742 DHX9Q08211 1270 aaKnown RBP7.06□□□□□ -1.28
TRIM27-204ENST00000467742 MEIOBQ8N635 442 aa7.06□□□□□ -1.28
TRIM27-204ENST00000467742 CCER1Q8TC90 406 aaPredicted RBP7.06□□□□□ -1.28
TRIM27-204ENST00000467742 KCTD15Q96SI1 283 aaPredicted RBP7.06□□□□□ -1.28
TRIM27-204ENST00000467742 ZFAND3Q9H8U3 227 aa7.06□□□□□ -1.28
TRIM27-204ENST00000467742 TRAK1Q9UPV9 953 aa7.06□□□□□ -1.28
TRIM27-204ENST00000467742 PIK3C2AO00443 1686 aa7.06□□□□□ -1.28
TRIM27-204ENST00000467742 FBXO45P0C2W1 286 aa7.05□□□□□ -1.28
TRIM27-204ENST00000467742 SAFB2Q14151 953 aaKnown RBP eCLIP7.05□□□□□ -1.28
TRIM27-204ENST00000467742 ZFP42Q96MM3 310 aa7.05□□□□□ -1.28
TRIM27-204ENST00000467742 PRAM1Q96QH2 718 aa7.05□□□□□ -1.28
TRIM27-204ENST00000467742 PGPEP1Q9NXJ5 209 aa7.05□□□□□ -1.28
TRIM27-204ENST00000467742 USP54Q70EL1 1684 aa7.05□□□□□ -1.28
TRIM27-204ENST00000467742 KIF20BQ96Q89 1820 aa7.04□□□□□ -1.28
TRIM27-204ENST00000467742 PLCH1Q4KWH8 1693 aa7.04□□□□□ -1.28
TRIM27-204ENST00000467742 PIP4K2BP78356 416 aa7.04□□□□□ -1.28
TRIM27-204ENST00000467742 VAC14Q08AM6 782 aa7.04□□□□□ -1.28
TRIM27-204ENST00000467742 TREML4Q6UXN2 200 aa7.04□□□□□ -1.28
TRIM27-204ENST00000467742 LINC00528Q8N1L1 170 aa7.04□□□□□ -1.28
TRIM27-204ENST00000467742 LRP6O75581 1613 aa7.04□□□□□ -1.28
TRIM27-204ENST00000467742 PRR36Q9H6K5 1346 aa7.03□□□□□ -1.28
TRIM27-204ENST00000467742 ANKARQ7Z5J8 1434 aa7.03□□□□□ -1.28
TRIM27-204ENST00000467742 UPP2O95045 317 aa7.03□□□□□ -1.28
TRIM27-204ENST00000467742 INTS6LQ5JSJ4 861 aaKnown RBP7.03□□□□□ -1.28
TRIM27-204ENST00000467742 PPP1R26Q5T8A7 1209 aaPredicted RBP7.03□□□□□ -1.28
TRIM27-204ENST00000467742 LCE2AQ5TA79 106 aaPredicted RBP7.03□□□□□ -1.28
TRIM27-204ENST00000467742 PURBQ96QR8 312 aaKnown RBP7.03□□□□□ -1.28
TRIM27-204ENST00000467742 HIRIP3Q9BW71 556 aaPredicted RBP7.03□□□□□ -1.28
TRIM27-204ENST00000467742 NFX1Q12986 1120 aaKnown RBP7.02□□□□□ -1.29
TRIM27-204ENST00000467742 SEMA3FQ13275 785 aa7.02□□□□□ -1.29
TRIM27-204ENST00000467742 BRINP3Q76B58 766 aa7.02□□□□□ -1.29
TRIM27-204ENST00000467742 DZIP3Q86Y13 1208 aaKnown RBP7.02□□□□□ -1.29
TRIM27-204ENST00000467742 SEPT12Q8IYM1 358 aa7.02□□□□□ -1.29
TRIM27-204ENST00000467742 DDX17Q92841 729 aaKnown RBP7.02□□□□□ -1.29
TRIM27-204ENST00000467742 C19orf44Q9H6X5 657 aa7.02□□□□□ -1.29
TRIM27-204ENST00000467742 USP47Q96K76 1375 aa7.02□□□□□ -1.29
TRIM27-204ENST00000467742 SBNO2Q9Y2G9 1366 aa7.02□□□□□ -1.29
TRIM27-204ENST00000467742 CENPJQ9HC77 1338 aaPredicted RBP7.01□□□□□ -1.29
TRIM27-204ENST00000467742 NRAPQ86VF7 1730 aa7.01□□□□□ -1.29
TRIM27-204ENST00000467742 ANKRD26Q9UPS8 1709 aa7.01□□□□□ -1.29
TRIM27-204ENST00000467742 CD163L1Q9NR16 1453 aa7.01□□□□□ -1.29
TRIM27-204ENST00000467742 ESPNB1AK53 854 aa7.01□□□□□ -1.29
TRIM27-204ENST00000467742 TERTO14746 1132 aaKnown RBP7.01□□□□□ -1.29
TRIM27-204ENST00000467742 TOM1O60784 492 aa7.01□□□□□ -1.29
TRIM27-204ENST00000467742 WFS1O76024 890 aa7.01□□□□□ -1.29
TRIM27-204ENST00000467742 HSPA1LP34931 641 aa7.01□□□□□ -1.29
TRIM27-204ENST00000467742 Q6ZVU0 165 aa7.01□□□□□ -1.29
TRIM27-204ENST00000467742 NPAS3Q8IXF0 933 aa7.01□□□□□ -1.29
TRIM27-204ENST00000467742 SIRT1Q96EB6 747 aa7.01□□□□□ -1.29
TRIM27-204ENST00000467742 CALR3Q96L12 384 aaKnown RBP7.01□□□□□ -1.29
TRIM27-204ENST00000467742 TSEN34Q9BSV6 310 aaKnown RBP7.01□□□□□ -1.29
TRIM27-204ENST00000467742 ALG2Q9H553 416 aa7.01□□□□□ -1.29
TRIM27-204ENST00000467742 LTN1O94822 1766 aa7□□□□□ -1.29
TRIM27-204ENST00000467742 EIF3AQ14152 1382 aaKnown RBP7□□□□□ -1.29
TRIM27-204ENST00000467742 ATF3P18847 181 aa7□□□□□ -1.29
TRIM27-204ENST00000467742 GLMNQ92990 594 aa7□□□□□ -1.29
TRIM27-204ENST00000467742 ORAI2Q96SN7 254 aa7□□□□□ -1.29
TRIM27-204ENST00000467742 SLAIN2Q9P270 581 aa7□□□□□ -1.29
TRIM27-204ENST00000467742 NXF1Q9UBU9 619 aaKnown RBP7□□□□□ -1.29
TRIM27-204ENST00000467742 PCDHB9Q9Y5E1 797 aa7□□□□□ -1.29
TRIM27-204ENST00000467742 RGPD5Q99666 1765 aa7□□□□□ -1.29
TRIM27-204ENST00000467742 WNK3Q9BYP7 1800 aa6.99□□□□□ -1.29
TRIM27-204ENST00000467742 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.99□□□□□ -1.29
TRIM27-204ENST00000467742 POM121CA8CG34 1229 aa6.99□□□□□ -1.29
TRIM27-204ENST00000467742 BMP2P12643 396 aa6.99□□□□□ -1.29
TRIM27-204ENST00000467742 HDGFL1Q5TGJ6 251 aa6.99□□□□□ -1.29
TRIM27-204ENST00000467742 CCDC125Q86Z20 511 aa6.99□□□□□ -1.29
TRIM27-204ENST00000467742 CARD11Q9BXL7 1154 aa6.99□□□□□ -1.29
TRIM27-204ENST00000467742 POGKQ9P215 609 aa6.99□□□□□ -1.29
TRIM27-204ENST00000467742 SERPINA10Q9UK55 444 aa6.99□□□□□ -1.29
TRIM27-204ENST00000467742 PPIP5K1Q6PFW1 1433 aa6.99□□□□□ -1.29
TRIM27-204ENST00000467742 PNPLA6Q8IY17 1366 aa6.98□□□□□ -1.29
TRIM27-204ENST00000467742 WASLO00401 505 aaPredicted RBP6.98□□□□□ -1.29
TRIM27-204ENST00000467742 C6orf118Q5T5N4 469 aa6.98□□□□□ -1.29
TRIM27-204ENST00000467742 CCDC97Q96F63 343 aaPredicted RBP6.98□□□□□ -1.29
TRIM27-204ENST00000467742 TNS3Q68CZ2 1445 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms