RNA–Protein interactions for RNA: ENST00000467560.5

ATPAF2-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 2

Gene ATPAF2, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-204ENST00000467560 CCDC184Q52MB2 194 aa19.32■□□□□ 0.68
ATPAF2-204ENST00000467560 DPY19L2Q6NUT2 758 aa19.32■□□□□ 0.68
ATPAF2-204ENST00000467560 SMC1BQ8NDV3 1235 aa19.32■□□□□ 0.68
ATPAF2-204ENST00000467560 CHPF2Q9P2E5 772 aa19.32■□□□□ 0.68
ATPAF2-204ENST00000467560 RIC1Q4ADV7 1423 aa19.32■□□□□ 0.68
ATPAF2-204ENST00000467560 POTEIP0CG38 1075 aa19.31■□□□□ 0.68
ATPAF2-204ENST00000467560 POTEJP0CG39 1038 aa19.31■□□□□ 0.68
ATPAF2-204ENST00000467560 ALDH1B1P30837 517 aa19.31■□□□□ 0.68
ATPAF2-204ENST00000467560 SYNE4Q8N205 404 aa19.31■□□□□ 0.68
ATPAF2-204ENST00000467560 ZNF428Q96B54 188 aa19.31■□□□□ 0.68
ATPAF2-204ENST00000467560 PCNTO95613 3336 aa19.3■□□□□ 0.68
ATPAF2-204ENST00000467560 ZNF541Q9H0D2 1346 aa19.3■□□□□ 0.68
ATPAF2-204ENST00000467560 APAF1O14727 1248 aa19.3■□□□□ 0.68
ATPAF2-204ENST00000467560 DDX21Q9NR30 783 aaKnown RBP eCLIP19.3■□□□□ 0.68
ATPAF2-204ENST00000467560 PARP10Q53GL7 1025 aa19.29■□□□□ 0.68
ATPAF2-204ENST00000467560 RTKN2Q8IZC4 609 aa19.29■□□□□ 0.68
ATPAF2-204ENST00000467560 CFAP44Q96MT7 982 aa19.29■□□□□ 0.68
ATPAF2-204ENST00000467560 UTP14AQ9BVJ6 771 aaKnown RBP19.29■□□□□ 0.68
ATPAF2-204ENST00000467560 MBIPQ9NS73 344 aa19.29■□□□□ 0.68
ATPAF2-204ENST00000467560 COL4A5P29400 1685 aa19.29■□□□□ 0.68
ATPAF2-204ENST00000467560 TCERG1O14776 1098 aaKnown RBP19.28■□□□□ 0.68
ATPAF2-204ENST00000467560 ZNF853P0CG23 659 aa19.28■□□□□ 0.68
ATPAF2-204ENST00000467560 SLC10A5Q5PT55 438 aa19.28■□□□□ 0.68
ATPAF2-204ENST00000467560 PPP1R42Q7Z4L9 355 aa19.28■□□□□ 0.68
ATPAF2-204ENST00000467560 NLRP10Q86W26 655 aa19.28■□□□□ 0.68
ATPAF2-204ENST00000467560 RPGRQ92834 1020 aaKnown RBP19.28■□□□□ 0.68
ATPAF2-204ENST00000467560 IARSP41252 1262 aaKnown RBP19.27■□□□□ 0.68
ATPAF2-204ENST00000467560 HDGFL1Q5TGJ6 251 aa19.27■□□□□ 0.68
ATPAF2-204ENST00000467560 HCLS1P14317 486 aaPredicted RBP19.26■□□□□ 0.67
ATPAF2-204ENST00000467560 TCIRG1Q13488 830 aa19.26■□□□□ 0.67
ATPAF2-204ENST00000467560 DUSP27Q5VZP5 1158 aa19.26■□□□□ 0.67
ATPAF2-204ENST00000467560 RBM17Q96I25 401 aaKnown RBP19.26■□□□□ 0.67
ATPAF2-204ENST00000467560 CRAMP1Q96RY5 1269 aa19.26■□□□□ 0.67
ATPAF2-204ENST00000467560 PPEF1O14829 653 aaPredicted RBP19.25■□□□□ 0.67
ATPAF2-204ENST00000467560 L3MBTL3Q96JM7 780 aaPredicted RBP19.25■□□□□ 0.67
ATPAF2-204ENST00000467560 PSMD1Q99460 953 aa19.25■□□□□ 0.67
ATPAF2-204ENST00000467560 FZD9O00144 591 aa19.24■□□□□ 0.67
ATPAF2-204ENST00000467560 HOXB7P09629 217 aa19.24■□□□□ 0.67
ATPAF2-204ENST00000467560 KLRG1Q96E93 195 aa19.24■□□□□ 0.67
ATPAF2-204ENST00000467560 NLRP3Q96P20 1036 aa19.24■□□□□ 0.67
ATPAF2-204ENST00000467560 ABCC4O15439 1325 aa19.24■□□□□ 0.67
ATPAF2-204ENST00000467560 HSP90AB3PQ58FF7 597 aa19.23■□□□□ 0.67
ATPAF2-204ENST00000467560 ANKRD36CQ5JPF3 1778 aa19.23■□□□□ 0.67
ATPAF2-204ENST00000467560 ELL2O00472 640 aaPredicted RBP19.22■□□□□ 0.67
ATPAF2-204ENST00000467560 ZEB1P37275 1124 aaPredicted RBP19.22■□□□□ 0.67
ATPAF2-204ENST00000467560 CC2D2BQ6DHV5 1058 aa19.22■□□□□ 0.67
ATPAF2-204ENST00000467560 PLBD2Q8NHP8 589 aa19.22■□□□□ 0.67
ATPAF2-204ENST00000467560 TAF1DQ9H5J8 278 aaPredicted RBP19.22■□□□□ 0.67
ATPAF2-204ENST00000467560 IFT57Q9NWB7 429 aa19.22■□□□□ 0.67
ATPAF2-204ENST00000467560 DBF4Q9UBU7 674 aaPredicted RBP19.22■□□□□ 0.67
ATPAF2-204ENST00000467560 TRMT112Q9UI30 125 aaKnown RBP19.22■□□□□ 0.67
ATPAF2-204ENST00000467560 ATP5J2-PTCD1G3V325 749 aa19.21■□□□□ 0.67
ATPAF2-204ENST00000467560 CHADLQ6NUI6 762 aa19.21■□□□□ 0.67
ATPAF2-204ENST00000467560 ANKRD13DQ6ZTN6 518 aa19.21■□□□□ 0.67
ATPAF2-204ENST00000467560 C8orf58Q8NAV2 365 aa19.21■□□□□ 0.67
ATPAF2-204ENST00000467560 ISCA1Q9BUE6 129 aa19.21■□□□□ 0.67
ATPAF2-204ENST00000467560 LAMB2P55268 1798 aa19.2■□□□□ 0.66
ATPAF2-204ENST00000467560 JMYQ8N9B5 988 aa19.2■□□□□ 0.66
ATPAF2-204ENST00000467560 PHAXQ9H814 394 aaKnown RBP19.2■□□□□ 0.66
ATPAF2-204ENST00000467560 ATP6V0A2Q9Y487 856 aa19.2■□□□□ 0.66
ATPAF2-204ENST00000467560 RNF123Q5XPI4 1314 aa19.2■□□□□ 0.66
ATPAF2-204ENST00000467560 SH3TC1Q8TE82 1336 aa19.2■□□□□ 0.66
ATPAF2-204ENST00000467560 HYPKQ9NX55 129 aa19.19■□□□□ 0.66
ATPAF2-204ENST00000467560 COL4A1P02462 1669 aa19.18■□□□□ 0.66
ATPAF2-204ENST00000467560 IQCA1LA6NCM1 817 aa19.18■□□□□ 0.66
ATPAF2-204ENST00000467560 GNAI1P63096 354 aa19.18■□□□□ 0.66
ATPAF2-204ENST00000467560 LARGE2Q8N3Y3 721 aa19.18■□□□□ 0.66
ATPAF2-204ENST00000467560 FAM89AQ96GI7 184 aa19.18■□□□□ 0.66
ATPAF2-204ENST00000467560 SCN4AP35499 1836 aa19.17■□□□□ 0.66
ATPAF2-204ENST00000467560 GPC2Q8N158 579 aa19.17■□□□□ 0.66
ATPAF2-204ENST00000467560 TSPYL6Q8N831 410 aa19.17■□□□□ 0.66
ATPAF2-204ENST00000467560 JDP2Q8WYK2 163 aa19.17■□□□□ 0.66
ATPAF2-204ENST00000467560 HACL1Q9UJ83 578 aa19.17■□□□□ 0.66
ATPAF2-204ENST00000467560 TAF1P21675 1872 aa19.16■□□□□ 0.66
ATPAF2-204ENST00000467560 EPHX2P34913 555 aa19.16■□□□□ 0.66
ATPAF2-204ENST00000467560 AOC3Q16853 763 aa19.16■□□□□ 0.66
ATPAF2-204ENST00000467560 EAPPQ56P03 285 aaPredicted RBP19.16■□□□□ 0.66
ATPAF2-204ENST00000467560 RTL5Q5HYW3 569 aaPredicted RBP19.16■□□□□ 0.66
ATPAF2-204ENST00000467560 LDHDQ86WU2 507 aa19.16■□□□□ 0.66
ATPAF2-204ENST00000467560 TSR2Q969E8 191 aaKnown RBP19.16■□□□□ 0.66
ATPAF2-204ENST00000467560 GJA3Q9Y6H8 435 aa19.16■□□□□ 0.66
ATPAF2-204ENST00000467560 PASKQ96RG2 1323 aa19.16■□□□□ 0.66
ATPAF2-204ENST00000467560 LTBP1Q14766 1721 aa19.16■□□□□ 0.66
ATPAF2-204ENST00000467560 DDX60Q8IY21 1712 aaKnown RBP19.15■□□□□ 0.66
ATPAF2-204ENST00000467560 ADAMTSL1Q8N6G6 1762 aa19.15■□□□□ 0.66
ATPAF2-204ENST00000467560 BBOX1O75936 387 aa19.15■□□□□ 0.66
ATPAF2-204ENST00000467560 GRIPAP1Q4V328 841 aa19.15■□□□□ 0.66
ATPAF2-204ENST00000467560 SP8Q8IXZ3 490 aa19.15■□□□□ 0.66
ATPAF2-204ENST00000467560 RTFDC1Q9BY42 306 aaPredicted RBP19.15■□□□□ 0.66
ATPAF2-204ENST00000467560 PPIP5K2O43314 1243 aa19.14■□□□□ 0.65
ATPAF2-204ENST00000467560 ITGBL1O95965 494 aaPredicted RBP19.14■□□□□ 0.65
ATPAF2-204ENST00000467560 CALD1Q05682 793 aaKnown RBP19.14■□□□□ 0.65
ATPAF2-204ENST00000467560 GRAPQ13588 217 aa19.14■□□□□ 0.65
ATPAF2-204ENST00000467560 DDX46Q7L014 1031 aaKnown RBP19.14■□□□□ 0.65
ATPAF2-204ENST00000467560 GRAPLQ8TC17 118 aaPredicted RBP19.14■□□□□ 0.65
ATPAF2-204ENST00000467560 SCNN1DP51172 638 aa19.13■□□□□ 0.65
ATPAF2-204ENST00000467560 EIF6P56537 245 aaKnown RBP19.13■□□□□ 0.65
ATPAF2-204ENST00000467560 TRIM28Q13263 835 aaKnown RBP19.13■□□□□ 0.65
ATPAF2-204ENST00000467560 CELF1Q92879 486 aaKnown RBP19.13■□□□□ 0.65
ATPAF2-204ENST00000467560 DUOX1Q9NRD9 1551 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms