RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 ATP2B4P23634 1241 aa7.34□□□□□ -1.23
VPS50-209ENST00000467326 CTBSQ01459 385 aa7.34□□□□□ -1.23
VPS50-209ENST00000467326 DGKZQ13574 1117 aa7.34□□□□□ -1.23
VPS50-209ENST00000467326 FAM182BQ5T319 152 aa7.34□□□□□ -1.23
VPS50-209ENST00000467326 IER5Q5VY09 327 aa7.34□□□□□ -1.23
VPS50-209ENST00000467326 MYO19Q96H55 970 aa7.34□□□□□ -1.23
VPS50-209ENST00000467326 CEP63Q96MT8 703 aa7.34□□□□□ -1.23
VPS50-209ENST00000467326 BRD7Q9NPI1 651 aa7.34□□□□□ -1.23
VPS50-209ENST00000467326 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.34□□□□□ -1.23
VPS50-209ENST00000467326 SLAIN2Q9P270 581 aa7.34□□□□□ -1.23
VPS50-209ENST00000467326 HCN2Q9UL51 889 aa7.34□□□□□ -1.23
VPS50-209ENST00000467326 TMEM88BA6NKF7 163 aa7.33□□□□□ -1.24
VPS50-209ENST00000467326 C2CD2LO14523 706 aa7.33□□□□□ -1.24
VPS50-209ENST00000467326 BTLAQ7Z6A9 289 aa7.33□□□□□ -1.24
VPS50-209ENST00000467326 COL26A1Q96A83 441 aa7.33□□□□□ -1.24
VPS50-209ENST00000467326 RRAGCQ9HB90 399 aa7.33□□□□□ -1.24
VPS50-209ENST00000467326 STRN4Q9NRL3 753 aa7.33□□□□□ -1.24
VPS50-209ENST00000467326 KLK14Q9P0G3 267 aa7.33□□□□□ -1.24
VPS50-209ENST00000467326 MARK1Q9P0L2 795 aa7.33□□□□□ -1.24
VPS50-209ENST00000467326 KRBA1A5PL33 1030 aa7.32□□□□□ -1.24
VPS50-209ENST00000467326 PTCD1O75127 700 aaKnown RBP7.31□□□□□ -1.24
VPS50-209ENST00000467326 FURINP09958 794 aa7.31□□□□□ -1.24
VPS50-209ENST00000467326 ARAFP10398 606 aa7.31□□□□□ -1.24
VPS50-209ENST00000467326 SLCO4C1Q6ZQN7 724 aa7.31□□□□□ -1.24
VPS50-209ENST00000467326 GOLGA6L1Q8N7Z2 621 aa7.31□□□□□ -1.24
VPS50-209ENST00000467326 BCS1LQ9Y276 419 aa7.31□□□□□ -1.24
VPS50-209ENST00000467326 USTQ9Y2C2 406 aa7.31□□□□□ -1.24
VPS50-209ENST00000467326 SFSWAPQ12872 951 aaKnown RBP7.3□□□□□ -1.24
VPS50-209ENST00000467326 C16orf46Q6P387 395 aa7.3□□□□□ -1.24
VPS50-209ENST00000467326 AVENQ9NQS1 362 aaPredicted RBP7.3□□□□□ -1.24
VPS50-209ENST00000467326 GGA1Q9UJY5 639 aa7.3□□□□□ -1.24
VPS50-209ENST00000467326 LRFN2Q9ULH4 789 aa7.3□□□□□ -1.24
VPS50-209ENST00000467326 EPB42P16452 691 aa7.29□□□□□ -1.24
VPS50-209ENST00000467326 ADH6P28332 368 aa7.29□□□□□ -1.24
VPS50-209ENST00000467326 IDH3AP50213 366 aa7.29□□□□□ -1.24
VPS50-209ENST00000467326 KCNQ4P56696 695 aa7.29□□□□□ -1.24
VPS50-209ENST00000467326 C11orf91Q3C1V1 193 aa7.29□□□□□ -1.24
VPS50-209ENST00000467326 COX20Q5RI15 118 aa7.29□□□□□ -1.24
VPS50-209ENST00000467326 ZNF468Q5VIY5 522 aaPredicted RBP7.29□□□□□ -1.24
VPS50-209ENST00000467326 CAPN12Q6ZSI9 719 aa7.29□□□□□ -1.24
VPS50-209ENST00000467326 NOP53Q9NZM5 478 aaKnown RBP7.29□□□□□ -1.24
VPS50-209ENST00000467326 DMGDHQ9UI17 866 aaKnown RBP7.29□□□□□ -1.24
VPS50-209ENST00000467326 PRR12Q9ULL5 1215 aa7.29□□□□□ -1.24
VPS50-209ENST00000467326 KCNH4Q9UQ05 1017 aa7.29□□□□□ -1.24
VPS50-209ENST00000467326 CARNS1A5YM72 827 aa7.28□□□□□ -1.24
VPS50-209ENST00000467326 AMPD1P23109 780 aa7.28□□□□□ -1.24
VPS50-209ENST00000467326 SNRPNP63162 240 aaKnown RBP7.28□□□□□ -1.24
VPS50-209ENST00000467326 SPEM2Q0P670 501 aa7.28□□□□□ -1.24
VPS50-209ENST00000467326 NAA30Q147X3 362 aaPredicted RBP7.28□□□□□ -1.24
VPS50-209ENST00000467326 GRIN2CQ14957 1233 aa7.28□□□□□ -1.24
VPS50-209ENST00000467326 EDARADDQ8WWZ3 215 aa7.28□□□□□ -1.24
VPS50-209ENST00000467326 SAP130Q9H0E3 1048 aa7.28□□□□□ -1.24
VPS50-209ENST00000467326 NEURL1BA8MQ27 555 aa7.27□□□□□ -1.25
VPS50-209ENST00000467326 ARSDP51689 593 aa7.27□□□□□ -1.25
VPS50-209ENST00000467326 NEUROD1Q13562 356 aa7.27□□□□□ -1.25
VPS50-209ENST00000467326 RAB44Q7Z6P3 723 aaPredicted RBP7.27□□□□□ -1.25
VPS50-209ENST00000467326 RETREG2Q8NC44 543 aa7.27□□□□□ -1.25
VPS50-209ENST00000467326 IFT43Q96FT9 208 aa7.27□□□□□ -1.25
VPS50-209ENST00000467326 SLC30A3Q99726 388 aa7.27□□□□□ -1.25
VPS50-209ENST00000467326 TNFRSF10BO14763 440 aa7.26□□□□□ -1.25
VPS50-209ENST00000467326 GNB5O14775 395 aa7.26□□□□□ -1.25
VPS50-209ENST00000467326 MICAL2O94851 1124 aa7.26□□□□□ -1.25
VPS50-209ENST00000467326 SSFA2P28290 1259 aa7.26□□□□□ -1.25
VPS50-209ENST00000467326 INPP5BP32019 993 aa7.26□□□□□ -1.25
VPS50-209ENST00000467326 PCBP4P57723 403 aaKnown RBP7.26□□□□□ -1.25
VPS50-209ENST00000467326 C1orf229Q6ZS94 237 aaPredicted RBP7.26□□□□□ -1.25
VPS50-209ENST00000467326 FCHSD1Q86WN1 690 aa7.26□□□□□ -1.25
VPS50-209ENST00000467326 ETFBKMTQ8IXQ9 262 aa7.26□□□□□ -1.25
VPS50-209ENST00000467326 SEPT3Q9UH03 358 aa7.26□□□□□ -1.25
VPS50-209ENST00000467326 SHISA8B8ZZ34 492 aa7.25□□□□□ -1.25
VPS50-209ENST00000467326 EPXP11678 715 aa7.25□□□□□ -1.25
VPS50-209ENST00000467326 BRD2P25440 801 aaKnown RBP7.25□□□□□ -1.25
VPS50-209ENST00000467326 B4GALNT3Q6L9W6 998 aa7.25□□□□□ -1.25
VPS50-209ENST00000467326 SYT9Q86SS6 491 aa7.25□□□□□ -1.25
VPS50-209ENST00000467326 TREML1Q86YW5 311 aa7.25□□□□□ -1.25
VPS50-209ENST00000467326 COL8A1P27658 744 aa7.24□□□□□ -1.25
VPS50-209ENST00000467326 SCNN1AP37088 669 aa7.24□□□□□ -1.25
VPS50-209ENST00000467326 LCE3BQ5TA77 95 aa7.24□□□□□ -1.25
VPS50-209ENST00000467326 KLF15Q9UIH9 416 aa7.24□□□□□ -1.25
VPS50-209ENST00000467326 SIN3BO75182 1162 aa7.23□□□□□ -1.25
VPS50-209ENST00000467326 GRNP28799 593 aaKnown RBP7.23□□□□□ -1.25
VPS50-209ENST00000467326 BHMTQ93088 406 aa7.23□□□□□ -1.25
VPS50-209ENST00000467326 KRTAP4-12Q9BQ66 201 aa7.23□□□□□ -1.25
VPS50-209ENST00000467326 MTMR7Q9Y216 660 aa7.23□□□□□ -1.25
VPS50-209ENST00000467326 C1QTNF9BB2RNN3 333 aa7.22□□□□□ -1.25
VPS50-209ENST00000467326 CCINQ13939 588 aa7.22□□□□□ -1.25
VPS50-209ENST00000467326 FAM26DQ5JW98 314 aa7.22□□□□□ -1.25
VPS50-209ENST00000467326 PHLDB3Q6NSJ2 640 aa7.22□□□□□ -1.25
VPS50-209ENST00000467326 RGL4Q8IZJ4 473 aa7.22□□□□□ -1.25
VPS50-209ENST00000467326 ABTB2Q8N961 1025 aa7.22□□□□□ -1.25
VPS50-209ENST00000467326 HELQQ8TDG4 1101 aa7.22□□□□□ -1.25
VPS50-209ENST00000467326 PNMA5Q96PV4 448 aa7.22□□□□□ -1.25
VPS50-209ENST00000467326 STIM2Q9P246 746 aa7.22□□□□□ -1.25
VPS50-209ENST00000467326 ELOA3CA0A087WX78 387 aaPredicted RBP7.21□□□□□ -1.26
VPS50-209ENST00000467326 ELOA3DA6NLF2 546 aaPredicted RBP7.21□□□□□ -1.26
VPS50-209ENST00000467326 NFKB1P19838 968 aa7.21□□□□□ -1.26
VPS50-209ENST00000467326 ELOA3BQ3SY89 546 aa7.21□□□□□ -1.26
VPS50-209ENST00000467326 ZMYM1Q5SVZ6 1142 aa7.21□□□□□ -1.26
VPS50-209ENST00000467326 ELOA3Q8NG57 546 aa7.21□□□□□ -1.26
VPS50-209ENST00000467326 TNFRSF25Q93038 417 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms