RNA–Protein interactions for RNA: ENST00000467246.5

HPS1-208, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best)

Gene HPS1, Length 2,791 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-208ENST00000467246 ZBTB3Q9H5J0 574 aa13.83□□□□□ -0.19
HPS1-208ENST00000467246 BTG4Q9NY30 223 aa13.83□□□□□ -0.19
HPS1-208ENST00000467246 LAMB4A4D0S4 1761 aa13.83□□□□□ -0.2
HPS1-208ENST00000467246 TFCP2Q12800 502 aa13.83□□□□□ -0.2
HPS1-208ENST00000467246 CUL4AQ13619 759 aa13.83□□□□□ -0.2
HPS1-208ENST00000467246 LMBR1LQ6UX01 489 aa13.83□□□□□ -0.2
HPS1-208ENST00000467246 RUFY2Q8WXA3 655 aa13.83□□□□□ -0.2
HPS1-208ENST00000467246 AFDNP55196 1824 aaKnown RBP13.82□□□□□ -0.2
HPS1-208ENST00000467246 FAM227BQ96M60 508 aa13.82□□□□□ -0.2
HPS1-208ENST00000467246 SHANK3Q9BYB0 1731 aa13.82□□□□□ -0.2
HPS1-208ENST00000467246 H7C1W4 665 aa13.82□□□□□ -0.2
HPS1-208ENST00000467246 TMOD3Q9NYL9 352 aa13.82□□□□□ -0.2
HPS1-208ENST00000467246 COL15A1P39059 1388 aa13.81□□□□□ -0.2
HPS1-208ENST00000467246 UBR2Q8IWV8 1755 aa13.81□□□□□ -0.2
HPS1-208ENST00000467246 FSD2A1L4K1 749 aa13.81□□□□□ -0.2
HPS1-208ENST00000467246 FOXO4P98177 505 aa13.81□□□□□ -0.2
HPS1-208ENST00000467246 MCTP1Q6DN14 999 aa13.81□□□□□ -0.2
HPS1-208ENST00000467246 DBNLQ9UJU6 430 aaKnown RBP13.81□□□□□ -0.2
HPS1-208ENST00000467246 NHSL1Q5SYE7 1610 aa13.81□□□□□ -0.2
HPS1-208ENST00000467246 GOLGA6L3A6NEY3 463 aa13.81□□□□□ -0.2
HPS1-208ENST00000467246 GOLGA6L22H0YM25 854 aa13.81□□□□□ -0.2
HPS1-208ENST00000467246 TNNI3KQ59H18 835 aa13.81□□□□□ -0.2
HPS1-208ENST00000467246 FOXD4L5Q5VV16 416 aaPredicted RBP13.81□□□□□ -0.2
HPS1-208ENST00000467246 FOXD4L4Q8WXT5 416 aaPredicted RBP13.81□□□□□ -0.2
HPS1-208ENST00000467246 EDC3Q96F86 508 aaKnown RBP13.81□□□□□ -0.2
HPS1-208ENST00000467246 CHAMP1Q96JM3 812 aa13.81□□□□□ -0.2
HPS1-208ENST00000467246 CWC25Q9NXE8 425 aaPredicted RBP13.81□□□□□ -0.2
HPS1-208ENST00000467246 ASAP1Q9ULH1 1129 aa13.81□□□□□ -0.2
HPS1-208ENST00000467246 CHMP3Q9Y3E7 222 aa13.81□□□□□ -0.2
HPS1-208ENST00000467246 FPGT-TNNI3KV9GXZ4 949 aa13.81□□□□□ -0.2
HPS1-208ENST00000467246 TNS2Q63HR2 1409 aa13.8□□□□□ -0.2
HPS1-208ENST00000467246 NMIQ13287 307 aaPredicted RBP13.8□□□□□ -0.2
HPS1-208ENST00000467246 SKOR2Q2VWA4 1001 aaPredicted RBP13.8□□□□□ -0.2
HPS1-208ENST00000467246 CPA1P15085 419 aa13.8□□□□□ -0.2
HPS1-208ENST00000467246 PIGBQ92521 554 aa13.8□□□□□ -0.2
HPS1-208ENST00000467246 LARP6Q9BRS8 491 aaKnown RBP13.8□□□□□ -0.2
HPS1-208ENST00000467246 ZNF330Q9Y3S2 320 aaPredicted RBP13.8□□□□□ -0.2
HPS1-208ENST00000467246 L1TD1Q5T7N2 865 aaKnown RBP13.79□□□□□ -0.2
HPS1-208ENST00000467246 PRPF40BQ6NWY9 871 aaKnown RBP13.79□□□□□ -0.2
HPS1-208ENST00000467246 TTC14Q96N46 770 aa13.79□□□□□ -0.2
HPS1-208ENST00000467246 FSD1Q9BTV5 496 aa13.79□□□□□ -0.2
HPS1-208ENST00000467246 XRCC6P12956 609 aaKnown RBP eCLIP13.79□□□□□ -0.2
HPS1-208ENST00000467246 PTMSP20962 102 aa13.79□□□□□ -0.2
HPS1-208ENST00000467246 INTS4Q96HW7 963 aaKnown RBP13.79□□□□□ -0.2
HPS1-208ENST00000467246 NDUFB9Q9Y6M9 179 aa13.79□□□□□ -0.2
HPS1-208ENST00000467246 PAPPAQ13219 1627 aa13.79□□□□□ -0.2
HPS1-208ENST00000467246 A0A0D9SFI3 127 aa13.78□□□□□ -0.2
HPS1-208ENST00000467246 ADCK5Q3MIX3 580 aa13.78□□□□□ -0.2
HPS1-208ENST00000467246 CCDC171Q6TFL3 1326 aa13.78□□□□□ -0.2
HPS1-208ENST00000467246 CASTP20810 708 aaKnown RBP13.78□□□□□ -0.2
HPS1-208ENST00000467246 AK2P54819 239 aa13.78□□□□□ -0.2
HPS1-208ENST00000467246 DNAJC10Q8IXB1 793 aa13.78□□□□□ -0.2
HPS1-208ENST00000467246 CCDC191Q8NCU4 936 aa13.78□□□□□ -0.2
HPS1-208ENST00000467246 DBNDD2Q9BQY9 259 aa13.78□□□□□ -0.2
HPS1-208ENST00000467246 TOGARAM1Q9Y4F4 1720 aa13.78□□□□□ -0.2
HPS1-208ENST00000467246 NECTIN1Q15223 517 aa13.77□□□□□ -0.2
HPS1-208ENST00000467246 DDX49Q9Y6V7 483 aaKnown RBP13.77□□□□□ -0.2
HPS1-208ENST00000467246 HIP1O00291 1037 aa13.77□□□□□ -0.21
HPS1-208ENST00000467246 ATP5JP18859 108 aa13.77□□□□□ -0.21
HPS1-208ENST00000467246 ATG3Q9NT62 314 aa13.77□□□□□ -0.21
HPS1-208ENST00000467246 LMBRD1Q9NUN5 540 aa13.77□□□□□ -0.21
HPS1-208ENST00000467246 CCDC9Q9Y3X0 531 aaKnown RBP13.77□□□□□ -0.21
HPS1-208ENST00000467246 RBM8AQ9Y5S9 174 aaKnown RBP13.77□□□□□ -0.21
HPS1-208ENST00000467246 RUFY3Q7L099 469 aa13.77□□□□□ -0.21
HPS1-208ENST00000467246 ATG9AQ7Z3C6 839 aa13.77□□□□□ -0.21
HPS1-208ENST00000467246 MAP4K1Q92918 833 aa13.76□□□□□ -0.21
HPS1-208ENST00000467246 ZNF594Q96JF6 807 aaPredicted RBP13.76□□□□□ -0.21
HPS1-208ENST00000467246 JAKMIP1Q96N16 626 aaKnown RBP13.76□□□□□ -0.21
HPS1-208ENST00000467246 NUP188Q5SRE5 1749 aa13.76□□□□□ -0.21
HPS1-208ENST00000467246 BRD1O95696 1058 aa13.76□□□□□ -0.21
HPS1-208ENST00000467246 CHGBP05060 677 aa13.76□□□□□ -0.21
HPS1-208ENST00000467246 KLHL40Q2TBA0 621 aa13.76□□□□□ -0.21
HPS1-208ENST00000467246 ZNF589Q86UQ0 364 aaPredicted RBP13.76□□□□□ -0.21
HPS1-208ENST00000467246 GAS2L3Q86XJ1 694 aa13.76□□□□□ -0.21
HPS1-208ENST00000467246 KCNB2Q92953 911 aa13.76□□□□□ -0.21
HPS1-208ENST00000467246 PRPF40AO75400 957 aaKnown RBP13.75□□□□□ -0.21
HPS1-208ENST00000467246 KCNJ4P48050 445 aa13.75□□□□□ -0.21
HPS1-208ENST00000467246 VSIG10Q8N0Z9 540 aa13.75□□□□□ -0.21
HPS1-208ENST00000467246 DNAJC2Q99543 621 aaKnown RBP13.75□□□□□ -0.21
HPS1-208ENST00000467246 PANK2Q9BZ23 570 aa13.75□□□□□ -0.21
HPS1-208ENST00000467246 SNRKQ9NRH2 765 aa13.75□□□□□ -0.21
HPS1-208ENST00000467246 COL9A3Q14050 684 aaPredicted RBP13.75□□□□□ -0.21
HPS1-208ENST00000467246 LRRC24Q50LG9 513 aa13.75□□□□□ -0.21
HPS1-208ENST00000467246 CREB3L3Q68CJ9 461 aa13.75□□□□□ -0.21
HPS1-208ENST00000467246 ISCA1Q9BUE6 129 aa13.75□□□□□ -0.21
HPS1-208ENST00000467246 LIMCH1Q9UPQ0 1083 aa13.75□□□□□ -0.21
HPS1-208ENST00000467246 TIMM10P62072 90 aa13.74□□□□□ -0.21
HPS1-208ENST00000467246 TCIRG1Q13488 830 aa13.74□□□□□ -0.21
HPS1-208ENST00000467246 FAM43AQ8N2R8 423 aa13.74□□□□□ -0.21
HPS1-208ENST00000467246 PKNOX2Q96KN3 472 aa13.74□□□□□ -0.21
HPS1-208ENST00000467246 NEUROD6Q96NK8 337 aa13.74□□□□□ -0.21
HPS1-208ENST00000467246 ZSWIM6Q9HCJ5 1215 aa13.74□□□□□ -0.21
HPS1-208ENST00000467246 TJP1Q07157 1748 aa13.74□□□□□ -0.21
HPS1-208ENST00000467246 MED23Q9ULK4 1368 aa13.74□□□□□ -0.21
HPS1-208ENST00000467246 LARGE1O95461 756 aa13.73□□□□□ -0.21
HPS1-208ENST00000467246 ZKSCAN1P17029 563 aaPredicted RBP13.73□□□□□ -0.21
HPS1-208ENST00000467246 SLC4A9Q96Q91 983 aa13.73□□□□□ -0.21
HPS1-208ENST00000467246 PDRG1Q9NUG6 133 aa13.73□□□□□ -0.21
HPS1-208ENST00000467246 TAF6LQ9Y6J9 622 aa13.73□□□□□ -0.21
HPS1-208ENST00000467246 SLC27A2O14975 620 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms