RNA–Protein interactions for RNA: ENST00000466912.5

PTPN20-211, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 3

Gene PTPN20, Length 446 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-211ENST00000466912 ERFEQ4G0M1 354 aa12.81□□□□□ -0.36
PTPN20-211ENST00000466912 PPP1R42Q7Z4L9 355 aa12.81□□□□□ -0.36
PTPN20-211ENST00000466912 DNAAF4Q8WXU2 420 aa12.81□□□□□ -0.36
PTPN20-211ENST00000466912 GOLGB1Q14789 3259 aaKnown RBP12.81□□□□□ -0.36
PTPN20-211ENST00000466912 ABCC12Q96J65 1359 aa12.81□□□□□ -0.36
PTPN20-211ENST00000466912 F6X3S4 739 aa12.8□□□□□ -0.36
PTPN20-211ENST00000466912 CHRNA5P30532 468 aa12.8□□□□□ -0.36
PTPN20-211ENST00000466912 SLC10A5Q5PT55 438 aa12.8□□□□□ -0.36
PTPN20-211ENST00000466912 SMC4Q9NTJ3 1288 aa12.8□□□□□ -0.36
PTPN20-211ENST00000466912 PDE6BP35913 854 aa12.79□□□□□ -0.36
PTPN20-211ENST00000466912 SYNE4Q8N205 404 aa12.79□□□□□ -0.36
PTPN20-211ENST00000466912 CCDC191Q8NCU4 936 aa12.79□□□□□ -0.36
PTPN20-211ENST00000466912 RNF123Q5XPI4 1314 aa12.79□□□□□ -0.36
PTPN20-211ENST00000466912 NEURL1BA8MQ27 555 aa12.78□□□□□ -0.36
PTPN20-211ENST00000466912 NPHP1O15259 732 aa12.78□□□□□ -0.36
PTPN20-211ENST00000466912 GTF2E1P29083 439 aaPredicted RBP12.78□□□□□ -0.36
PTPN20-211ENST00000466912 CWF19L2Q2TBE0 894 aaKnown RBP12.78□□□□□ -0.36
PTPN20-211ENST00000466912 BEND3Q5T5X7 828 aa12.78□□□□□ -0.36
PTPN20-211ENST00000466912 C3orf67Q6ZVT6 689 aa12.78□□□□□ -0.36
PTPN20-211ENST00000466912 C2CD5Q86YS7 1000 aa12.78□□□□□ -0.36
PTPN20-211ENST00000466912 PLSCR2Q9NRY7 297 aa12.78□□□□□ -0.36
PTPN20-211ENST00000466912 CWC25Q9NXE8 425 aaPredicted RBP12.78□□□□□ -0.36
PTPN20-211ENST00000466912 TRMT112Q9UI30 125 aaKnown RBP12.78□□□□□ -0.36
PTPN20-211ENST00000466912 PDZRN3Q9UPQ7 1066 aa12.78□□□□□ -0.36
PTPN20-211ENST00000466912 PTPRCP08575 1304 aa12.78□□□□□ -0.36
PTPN20-211ENST00000466912 SH3TC1Q8TE82 1336 aa12.78□□□□□ -0.36
PTPN20-211ENST00000466912 NUP98P52948 1817 aa12.78□□□□□ -0.36
PTPN20-211ENST00000466912 AFDNP55196 1824 aaKnown RBP12.77□□□□□ -0.37
PTPN20-211ENST00000466912 KIF13BQ9NQT8 1826 aa12.77□□□□□ -0.37
PTPN20-211ENST00000466912 H0YIN7 160 aa12.77□□□□□ -0.37
PTPN20-211ENST00000466912 BCAR3O75815 825 aa12.77□□□□□ -0.37
PTPN20-211ENST00000466912 SRGNP10124 158 aa12.77□□□□□ -0.37
PTPN20-211ENST00000466912 YBX3P16989 372 aaKnown RBP eCLIP12.77□□□□□ -0.37
PTPN20-211ENST00000466912 NEXNQ0ZGT2 675 aa12.77□□□□□ -0.37
PTPN20-211ENST00000466912 CRY2Q49AN0 593 aa12.77□□□□□ -0.37
PTPN20-211ENST00000466912 ZBTB38Q8NAP3 1195 aaPredicted RBP12.77□□□□□ -0.37
PTPN20-211ENST00000466912 LINS1Q8NG48 757 aa12.77□□□□□ -0.37
PTPN20-211ENST00000466912 FAM89AQ96GI7 184 aa12.77□□□□□ -0.37
PTPN20-211ENST00000466912 NOB1Q9ULX3 412 aaKnown RBP12.77□□□□□ -0.37
PTPN20-211ENST00000466912 RIC1Q4ADV7 1423 aa12.77□□□□□ -0.37
PTPN20-211ENST00000466912 PCCAP05165 728 aaPredicted RBP12.76□□□□□ -0.37
PTPN20-211ENST00000466912 HCLS1P14317 486 aaPredicted RBP12.76□□□□□ -0.37
PTPN20-211ENST00000466912 GCKRQ14397 625 aa12.76□□□□□ -0.37
PTPN20-211ENST00000466912 YTHDC1Q96MU7 727 aaKnown RBP12.76□□□□□ -0.37
PTPN20-211ENST00000466912 PIM2Q9P1W9 311 aa12.76□□□□□ -0.37
PTPN20-211ENST00000466912 WWC3Q9ULE0 1092 aa12.76□□□□□ -0.37
PTPN20-211ENST00000466912 H7C1W4 665 aa12.75□□□□□ -0.37
PTPN20-211ENST00000466912 RTL5Q5HYW3 569 aaPredicted RBP12.75□□□□□ -0.37
PTPN20-211ENST00000466912 STYK1Q6J9G0 422 aa12.75□□□□□ -0.37
PTPN20-211ENST00000466912 ARHGAP45Q92619 1136 aa12.75□□□□□ -0.37
PTPN20-211ENST00000466912 JARID2Q92833 1246 aaPredicted RBP12.75□□□□□ -0.37
PTPN20-211ENST00000466912 MASTLQ96GX5 879 aa12.75□□□□□ -0.37
PTPN20-211ENST00000466912 NLRP3Q96P20 1036 aa12.75□□□□□ -0.37
PTPN20-211ENST00000466912 KIAA1551Q9HCM1 1747 aa12.75□□□□□ -0.37
PTPN20-211ENST00000466912 IRS4O14654 1257 aaPredicted RBP12.74□□□□□ -0.37
PTPN20-211ENST00000466912 NPR1P16066 1061 aa12.74□□□□□ -0.37
PTPN20-211ENST00000466912 HOXA10P31260 410 aaPredicted RBP12.74□□□□□ -0.37
PTPN20-211ENST00000466912 CASP7P55210 303 aa12.74□□□□□ -0.37
PTPN20-211ENST00000466912 GPR162Q16538 588 aa12.74□□□□□ -0.37
PTPN20-211ENST00000466912 DALRD3Q5D0E6 543 aaKnown RBP12.74□□□□□ -0.37
PTPN20-211ENST00000466912 ZNF622Q969S3 477 aaKnown RBP eCLIP12.74□□□□□ -0.37
PTPN20-211ENST00000466912 ARFGEF2Q9Y6D5 1785 aa12.74□□□□□ -0.37
PTPN20-211ENST00000466912 KIF16BQ96L93 1317 aa12.73□□□□□ -0.37
PTPN20-211ENST00000466912 CDHR2Q9BYE9 1310 aa12.73□□□□□ -0.37
PTPN20-211ENST00000466912 ALDH1L1O75891 902 aa12.73□□□□□ -0.37
PTPN20-211ENST00000466912 SF3B3Q15393 1217 aaKnown RBP12.73□□□□□ -0.37
PTPN20-211ENST00000466912 SLC4A10Q6U841 1118 aa12.73□□□□□ -0.37
PTPN20-211ENST00000466912 TTLL6Q8N841 843 aa12.73□□□□□ -0.37
PTPN20-211ENST00000466912 SRCIN1Q9C0H9 1055 aa12.73□□□□□ -0.37
PTPN20-211ENST00000466912 BCS1LQ9Y276 419 aa12.73□□□□□ -0.37
PTPN20-211ENST00000466912 CACNA1FO60840 1977 aa12.72□□□□□ -0.37
PTPN20-211ENST00000466912 ANKRD31Q8N7Z5 1873 aa12.72□□□□□ -0.37
PTPN20-211ENST00000466912 PELP1Q8IZL8 1130 aaKnown RBP12.72□□□□□ -0.37
PTPN20-211ENST00000466912 CNKSR1Q969H4 720 aa12.72□□□□□ -0.37
PTPN20-211ENST00000466912 PLA2G12BQ9BX93 195 aa12.72□□□□□ -0.37
PTPN20-211ENST00000466912 API5Q9BZZ5 524 aaKnown RBP12.72□□□□□ -0.37
PTPN20-211ENST00000466912 GRIN3BO60391 1043 aa12.71□□□□□ -0.37
PTPN20-211ENST00000466912 PDE8AO60658 829 aa12.71□□□□□ -0.37
PTPN20-211ENST00000466912 TRIM27P14373 513 aa12.71□□□□□ -0.37
PTPN20-211ENST00000466912 UBE3BQ7Z3V4 1068 aa12.71□□□□□ -0.37
PTPN20-211ENST00000466912 C7orf43Q8WVR3 580 aa12.71□□□□□ -0.37
PTPN20-211ENST00000466912 CRAMP1Q96RY5 1269 aa12.71□□□□□ -0.37
PTPN20-211ENST00000466912 TNNQ9UQP3 1299 aa12.71□□□□□ -0.37
PTPN20-211ENST00000466912 ANKRD36CQ5JPF3 1778 aa12.71□□□□□ -0.38
PTPN20-211ENST00000466912 TNRC6CQ9HCJ0 1690 aaKnown RBP12.7□□□□□ -0.38
PTPN20-211ENST00000466912 UTYO14607 1347 aa12.7□□□□□ -0.38
PTPN20-211ENST00000466912 ABCC4O15439 1325 aa12.7□□□□□ -0.38
PTPN20-211ENST00000466912 GRM8O00222 908 aa12.7□□□□□ -0.38
PTPN20-211ENST00000466912 IPO8O15397 1037 aaKnown RBP12.7□□□□□ -0.38
PTPN20-211ENST00000466912 ALDH1B1P30837 517 aa12.7□□□□□ -0.38
PTPN20-211ENST00000466912 DSG3P32926 999 aa12.7□□□□□ -0.38
PTPN20-211ENST00000466912 PRPF40BQ6NWY9 871 aaKnown RBP12.7□□□□□ -0.38
PTPN20-211ENST00000466912 ATF7IPQ6VMQ6 1270 aa12.7□□□□□ -0.38
PTPN20-211ENST00000466912 RPGRQ92834 1020 aaKnown RBP12.7□□□□□ -0.38
PTPN20-211ENST00000466912 RBM17Q96I25 401 aaKnown RBP12.7□□□□□ -0.38
PTPN20-211ENST00000466912 N4BP2Q86UW6 1770 aaPredicted RBP12.7□□□□□ -0.38
PTPN20-211ENST00000466912 HSP90B1P14625 803 aaKnown RBP12.69□□□□□ -0.38
PTPN20-211ENST00000466912 CCT4P50991 539 aaKnown RBP12.69□□□□□ -0.38
PTPN20-211ENST00000466912 ZKSCAN2Q63HK3 967 aa12.69□□□□□ -0.38
PTPN20-211ENST00000466912 FRAT1Q92837 279 aaPredicted RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms