RNA–Protein interactions for RNA: ENST00000466830.5

CMC1-205, Transcript of C-X9-C motif containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMC1, Length 6,033 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-205ENST00000466830 CAVIN2O95810 425 aa13.12□□□□□ -0.31
CMC1-205ENST00000466830 ZFYP08048 801 aaPredicted RBP13.12□□□□□ -0.31
CMC1-205ENST00000466830 ATP10AO60312 1499 aa13.12□□□□□ -0.31
CMC1-205ENST00000466830 CLIP2Q9UDT6 1046 aa13.11□□□□□ -0.31
CMC1-205ENST00000466830 SBNO1A3KN83 1393 aa13.11□□□□□ -0.31
CMC1-205ENST00000466830 ABCA8O94911 1581 aa13.11□□□□□ -0.31
CMC1-205ENST00000466830 IL15P40933 162 aaPredicted RBP13.11□□□□□ -0.31
CMC1-205ENST00000466830 PHAXQ9H814 394 aaKnown RBP13.11□□□□□ -0.31
CMC1-205ENST00000466830 ADCY5O95622 1261 aa13.11□□□□□ -0.31
CMC1-205ENST00000466830 CDR1P51861 262 aa13.11□□□□□ -0.31
CMC1-205ENST00000466830 SSRP1Q08945 709 aaKnown RBP13.11□□□□□ -0.31
CMC1-205ENST00000466830 CWF19L2Q2TBE0 894 aaKnown RBP13.11□□□□□ -0.31
CMC1-205ENST00000466830 TCEANC2Q96MN5 208 aa13.11□□□□□ -0.31
CMC1-205ENST00000466830 RANBP6O60518 1105 aaKnown RBP13.11□□□□□ -0.31
CMC1-205ENST00000466830 ZNF165P49910 485 aa13.11□□□□□ -0.31
CMC1-205ENST00000466830 MCMDC2Q4G0Z9 681 aa13.11□□□□□ -0.31
CMC1-205ENST00000466830 BMP2KQ9NSY1 1161 aaPredicted RBP13.11□□□□□ -0.31
CMC1-205ENST00000466830 MAGI2Q86UL8 1455 aa13.11□□□□□ -0.31
CMC1-205ENST00000466830 RRP9O43818 475 aaKnown RBP13.11□□□□□ -0.31
CMC1-205ENST00000466830 IARSP41252 1262 aaKnown RBP13.11□□□□□ -0.31
CMC1-205ENST00000466830 USP5P45974 858 aa13.1□□□□□ -0.31
CMC1-205ENST00000466830 NFATC2IPQ8NCF5 419 aa13.1□□□□□ -0.31
CMC1-205ENST00000466830 LUC7LQ9NQ29 371 aaKnown RBP13.1□□□□□ -0.31
CMC1-205ENST00000466830 PIP4K2BP78356 416 aa13.1□□□□□ -0.31
CMC1-205ENST00000466830 PTPN14Q15678 1187 aa13.1□□□□□ -0.31
CMC1-205ENST00000466830 INTS4Q96HW7 963 aaKnown RBP13.1□□□□□ -0.31
CMC1-205ENST00000466830 HCLS1P14317 486 aaPredicted RBP13.1□□□□□ -0.31
CMC1-205ENST00000466830 SETQ01105 290 aaPredicted RBP13.1□□□□□ -0.31
CMC1-205ENST00000466830 MKNK2Q9HBH9 465 aa13.1□□□□□ -0.31
CMC1-205ENST00000466830 ADAMTS2O95450 1211 aa13.1□□□□□ -0.31
CMC1-205ENST00000466830 USP48Q86UV5 1035 aa13.1□□□□□ -0.31
CMC1-205ENST00000466830 DEF6Q9H4E7 631 aa13.1□□□□□ -0.31
CMC1-205ENST00000466830 UQCRFS1P1P0C7P4 283 aa13.09□□□□□ -0.31
CMC1-205ENST00000466830 KDM5CP41229 1560 aa13.09□□□□□ -0.31
CMC1-205ENST00000466830 NMIQ13287 307 aaPredicted RBP13.09□□□□□ -0.31
CMC1-205ENST00000466830 STX1AQ16623 288 aa13.09□□□□□ -0.31
CMC1-205ENST00000466830 DZIP1Q86YF9 867 aaKnown RBP13.09□□□□□ -0.31
CMC1-205ENST00000466830 C19orf44Q9H6X5 657 aa13.09□□□□□ -0.31
CMC1-205ENST00000466830 CNPY2Q9Y2B0 182 aa13.09□□□□□ -0.31
CMC1-205ENST00000466830 TMEM67Q5HYA8 995 aa13.09□□□□□ -0.31
CMC1-205ENST00000466830 CDC5LQ99459 802 aaKnown RBP13.09□□□□□ -0.31
CMC1-205ENST00000466830 ZHX3Q9H4I2 956 aa13.09□□□□□ -0.31
CMC1-205ENST00000466830 RNMTO43148 476 aaKnown RBP13.09□□□□□ -0.31
CMC1-205ENST00000466830 F13A1P00488 732 aa13.09□□□□□ -0.31
CMC1-205ENST00000466830 TANGO6Q9C0B7 1094 aa13.09□□□□□ -0.31
CMC1-205ENST00000466830 MICU3Q86XE3 530 aa13.09□□□□□ -0.31
CMC1-205ENST00000466830 ZGPATQ8N5A5 531 aaKnown RBP13.09□□□□□ -0.31
CMC1-205ENST00000466830 CNNM3Q8NE01 707 aa13.09□□□□□ -0.31
CMC1-205ENST00000466830 NEMFO60524 1076 aa13.08□□□□□ -0.31
CMC1-205ENST00000466830 HOXB7P09629 217 aa13.08□□□□□ -0.31
CMC1-205ENST00000466830 METAP2P50579 478 aaKnown RBP eCLIP13.08□□□□□ -0.31
CMC1-205ENST00000466830 GIMAP6Q6P9H5 292 aa13.08□□□□□ -0.31
CMC1-205ENST00000466830 PLXNC1O60486 1568 aa13.08□□□□□ -0.32
CMC1-205ENST00000466830 TXLNBQ8N3L3 684 aa13.08□□□□□ -0.32
CMC1-205ENST00000466830 OTUD7AQ8TE49 926 aaPredicted RBP13.08□□□□□ -0.32
CMC1-205ENST00000466830 EPB41L2O43491 1005 aaKnown RBP13.08□□□□□ -0.32
CMC1-205ENST00000466830 POLR3DP05423 398 aaPredicted RBP13.08□□□□□ -0.32
CMC1-205ENST00000466830 DDX21Q9NR30 783 aaKnown RBP eCLIP13.08□□□□□ -0.32
CMC1-205ENST00000466830 RBM5P52756 815 aaKnown RBP eCLIP13.08□□□□□ -0.32
CMC1-205ENST00000466830 AK2P54819 239 aa13.08□□□□□ -0.32
CMC1-205ENST00000466830 ATP2B3Q16720 1220 aa13.08□□□□□ -0.32
CMC1-205ENST00000466830 DCAF5Q96JK2 942 aa13.08□□□□□ -0.32
CMC1-205ENST00000466830 SSBP05455 408 aaKnown RBP eCLIP13.08□□□□□ -0.32
CMC1-205ENST00000466830 CATIPQ7Z7H3 387 aa13.08□□□□□ -0.32
CMC1-205ENST00000466830 PANK2Q9BZ23 570 aa13.08□□□□□ -0.32
CMC1-205ENST00000466830 MFSD6Q6ZSS7 791 aa13.07□□□□□ -0.32
CMC1-205ENST00000466830 LRRC2Q9BYS8 371 aa13.07□□□□□ -0.32
CMC1-205ENST00000466830 ANKIB1Q9P2G1 1089 aa13.07□□□□□ -0.32
CMC1-205ENST00000466830 PPFIA3O75145 1194 aa13.07□□□□□ -0.32
CMC1-205ENST00000466830 ARHGAP29Q52LW3 1261 aa13.07□□□□□ -0.32
CMC1-205ENST00000466830 ZSCAN29Q8IWY8 852 aaPredicted RBP13.07□□□□□ -0.32
CMC1-205ENST00000466830 KLF18A0A0U1RQI7 1052 aa13.07□□□□□ -0.32
CMC1-205ENST00000466830 ZSCAN12O43309 604 aa13.07□□□□□ -0.32
CMC1-205ENST00000466830 TOP1P11387 765 aaKnown RBP13.07□□□□□ -0.32
CMC1-205ENST00000466830 HMGB2P26583 209 aaKnown RBP13.07□□□□□ -0.32
CMC1-205ENST00000466830 KIF18AQ8NI77 898 aa13.07□□□□□ -0.32
CMC1-205ENST00000466830 ERLIN1O75477 346 aa13.07□□□□□ -0.32
CMC1-205ENST00000466830 UBXN4Q92575 508 aa13.07□□□□□ -0.32
CMC1-205ENST00000466830 NEO1Q92859 1461 aa13.07□□□□□ -0.32
CMC1-205ENST00000466830 KDM5AP29375 1690 aaKnown RBP13.07□□□□□ -0.32
CMC1-205ENST00000466830 KLHL10Q6JEL2 608 aa13.07□□□□□ -0.32
CMC1-205ENST00000466830 SEC63Q9UGP8 760 aaKnown RBP13.07□□□□□ -0.32
CMC1-205ENST00000466830 RAD50Q92878 1312 aa13.07□□□□□ -0.32
CMC1-205ENST00000466830 SAMD9LQ8IVG5 1584 aa13.06□□□□□ -0.32
CMC1-205ENST00000466830 PLEKHG3A1L390 1219 aa13.06□□□□□ -0.32
CMC1-205ENST00000466830 EIF5P55010 431 aaKnown RBP13.06□□□□□ -0.32
CMC1-205ENST00000466830 TRMT2AQ8IZ69 625 aaKnown RBP13.06□□□□□ -0.32
CMC1-205ENST00000466830 KLHL34Q8N239 644 aa13.06□□□□□ -0.32
CMC1-205ENST00000466830 Q6ZUG5 572 aa13.06□□□□□ -0.32
CMC1-205ENST00000466830 PDCL2Q8N4E4 241 aa13.06□□□□□ -0.32
CMC1-205ENST00000466830 GSDMDP57764 484 aa13.06□□□□□ -0.32
CMC1-205ENST00000466830 NOM1Q5C9Z4 860 aaKnown RBP13.06□□□□□ -0.32
CMC1-205ENST00000466830 PAG1Q9NWQ8 432 aa13.06□□□□□ -0.32
CMC1-205ENST00000466830 DNM1Q05193 864 aaKnown RBP13.06□□□□□ -0.32
CMC1-205ENST00000466830 ODF2Q5BJF6 829 aa13.06□□□□□ -0.32
CMC1-205ENST00000466830 CREB3L3Q68CJ9 461 aa13.06□□□□□ -0.32
CMC1-205ENST00000466830 ZNF444Q8N0Y2 327 aaPredicted RBP13.06□□□□□ -0.32
CMC1-205ENST00000466830 BIN1O00499 593 aa13.05□□□□□ -0.32
CMC1-205ENST00000466830 RAB11FIP4Q86YS3 637 aa13.05□□□□□ -0.32
CMC1-205ENST00000466830 CCDC144CPQ8IYA2 1237 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms