RNA–Protein interactions for RNA: ENST00000466732.2

VPS13D-203, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 377 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-203ENST00000466732 NEURL1BA8MQ27 555 aa7.71□□□□□ -1.18
VPS13D-203ENST00000466732 IDH3AP50213 366 aa7.71□□□□□ -1.18
VPS13D-203ENST00000466732 SLCO4C1Q6ZQN7 724 aa7.71□□□□□ -1.18
VPS13D-203ENST00000466732 GALNT6Q8NCL4 622 aa7.71□□□□□ -1.18
VPS13D-203ENST00000466732 IFT43Q96FT9 208 aa7.71□□□□□ -1.18
VPS13D-203ENST00000466732 SHISA8B8ZZ34 492 aa7.7□□□□□ -1.18
VPS13D-203ENST00000466732 MICAL2O94851 1124 aa7.7□□□□□ -1.18
VPS13D-203ENST00000466732 ADH6P28332 368 aa7.7□□□□□ -1.18
VPS13D-203ENST00000466732 PCBP4P57723 403 aaKnown RBP7.7□□□□□ -1.18
VPS13D-203ENST00000466732 SPEM2Q0P670 501 aa7.7□□□□□ -1.18
VPS13D-203ENST00000466732 NEDD1Q8NHV4 660 aa7.7□□□□□ -1.18
VPS13D-203ENST00000466732 EDARADDQ8WWZ3 215 aa7.7□□□□□ -1.18
VPS13D-203ENST00000466732 SSFA2P28290 1259 aa7.69□□□□□ -1.18
VPS13D-203ENST00000466732 INPP5BP32019 993 aa7.69□□□□□ -1.18
VPS13D-203ENST00000466732 SYT9Q86SS6 491 aa7.69□□□□□ -1.18
VPS13D-203ENST00000466732 SEPT3Q9UH03 358 aa7.69□□□□□ -1.18
VPS13D-203ENST00000466732 USTQ9Y2C2 406 aa7.69□□□□□ -1.18
VPS13D-203ENST00000466732 TNFRSF10BO14763 440 aa7.68□□□□□ -1.18
VPS13D-203ENST00000466732 EPXP11678 715 aa7.68□□□□□ -1.18
VPS13D-203ENST00000466732 BRD2P25440 801 aaKnown RBP7.68□□□□□ -1.18
VPS13D-203ENST00000466732 GRNP28799 593 aaKnown RBP7.68□□□□□ -1.18
VPS13D-203ENST00000466732 SCNN1AP37088 669 aa7.68□□□□□ -1.18
VPS13D-203ENST00000466732 ARSDP51689 593 aa7.68□□□□□ -1.18
VPS13D-203ENST00000466732 MARSP56192 900 aaKnown RBP7.68□□□□□ -1.18
VPS13D-203ENST00000466732 RAB44Q7Z6P3 723 aaPredicted RBP7.68□□□□□ -1.18
VPS13D-203ENST00000466732 FCHSD1Q86WN1 690 aa7.68□□□□□ -1.18
VPS13D-203ENST00000466732 TREML1Q86YW5 311 aa7.68□□□□□ -1.18
VPS13D-203ENST00000466732 OPLAHO14841 1288 aa7.67□□□□□ -1.18
VPS13D-203ENST00000466732 EPB42P16452 691 aa7.67□□□□□ -1.18
VPS13D-203ENST00000466732 FAM26DQ5JW98 314 aa7.67□□□□□ -1.18
VPS13D-203ENST00000466732 ETFBKMTQ8IXQ9 262 aa7.67□□□□□ -1.18
VPS13D-203ENST00000466732 SIN3BO75182 1162 aa7.66□□□□□ -1.18
VPS13D-203ENST00000466732 NEUROD1Q13562 356 aa7.66□□□□□ -1.18
VPS13D-203ENST00000466732 PHLDB3Q6NSJ2 640 aa7.66□□□□□ -1.18
VPS13D-203ENST00000466732 BHMTQ93088 406 aa7.66□□□□□ -1.18
VPS13D-203ENST00000466732 GSX2Q9BZM3 304 aa7.66□□□□□ -1.18
VPS13D-203ENST00000466732 RETREG2Q8NC44 543 aa7.65□□□□□ -1.18
VPS13D-203ENST00000466732 BTBD6Q96KE9 485 aa7.65□□□□□ -1.18
VPS13D-203ENST00000466732 STIM2Q9P246 746 aa7.65□□□□□ -1.18
VPS13D-203ENST00000466732 USP20Q9Y2K6 914 aa7.65□□□□□ -1.18
VPS13D-203ENST00000466732 AMPD1P23109 780 aa7.64□□□□□ -1.19
VPS13D-203ENST00000466732 CCINQ13939 588 aa7.64□□□□□ -1.19
VPS13D-203ENST00000466732 TNFRSF25Q93038 417 aa7.64□□□□□ -1.19
VPS13D-203ENST00000466732 SCARF2Q96GP6 870 aaPredicted RBP7.64□□□□□ -1.19
VPS13D-203ENST00000466732 MDFIQ99750 246 aa7.64□□□□□ -1.19
VPS13D-203ENST00000466732 EFCC1Q9HA90 598 aa7.64□□□□□ -1.19
VPS13D-203ENST00000466732 RTCBQ9Y3I0 505 aaKnown RBP7.64□□□□□ -1.19
VPS13D-203ENST00000466732 CNTNAP5Q8WYK1 1306 aa7.63□□□□□ -1.19
VPS13D-203ENST00000466732 ELOA3CA0A087WX78 387 aaPredicted RBP7.63□□□□□ -1.19
VPS13D-203ENST00000466732 ELOA3DA6NLF2 546 aaPredicted RBP7.63□□□□□ -1.19
VPS13D-203ENST00000466732 ADARB2-AS1A8MUL3 147 aa7.63□□□□□ -1.19
VPS13D-203ENST00000466732 SNRPNP63162 240 aaKnown RBP7.63□□□□□ -1.19
VPS13D-203ENST00000466732 ELOA3BQ3SY89 546 aa7.63□□□□□ -1.19
VPS13D-203ENST00000466732 CHSY3Q70JA7 882 aa7.63□□□□□ -1.19
VPS13D-203ENST00000466732 RGL4Q8IZJ4 473 aa7.63□□□□□ -1.19
VPS13D-203ENST00000466732 ELOA3Q8NG57 546 aa7.63□□□□□ -1.19
VPS13D-203ENST00000466732 HELQQ8TDG4 1101 aa7.63□□□□□ -1.19
VPS13D-203ENST00000466732 PNMA5Q96PV4 448 aa7.63□□□□□ -1.19
VPS13D-203ENST00000466732 C11orf16Q9NQ32 467 aa7.63□□□□□ -1.19
VPS13D-203ENST00000466732 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.63□□□□□ -1.19
VPS13D-203ENST00000466732 HOXB4P17483 251 aaPredicted RBP7.62□□□□□ -1.19
VPS13D-203ENST00000466732 NFKB1P19838 968 aa7.62□□□□□ -1.19
VPS13D-203ENST00000466732 CMTR1Q8N1G2 835 aaKnown RBP7.62□□□□□ -1.19
VPS13D-203ENST00000466732 ABTB2Q8N961 1025 aa7.62□□□□□ -1.19
VPS13D-203ENST00000466732 GTF3C2Q8WUA4 911 aaPredicted RBP7.62□□□□□ -1.19
VPS13D-203ENST00000466732 RRAGCQ9HB90 399 aa7.62□□□□□ -1.19
VPS13D-203ENST00000466732 RNF225M0QZC1 329 aaPredicted RBP7.61□□□□□ -1.19
VPS13D-203ENST00000466732 ZBTB39O15060 712 aa7.61□□□□□ -1.19
VPS13D-203ENST00000466732 ALAS2P22557 587 aa7.61□□□□□ -1.19
VPS13D-203ENST00000466732 ZAP70P43403 619 aa7.61□□□□□ -1.19
VPS13D-203ENST00000466732 KCNMA1Q12791 1236 aa7.61□□□□□ -1.19
VPS13D-203ENST00000466732 KRT25Q7Z3Z0 450 aa7.61□□□□□ -1.19
VPS13D-203ENST00000466732 BEND7Q8N7W2 519 aaPredicted RBP7.61□□□□□ -1.19
VPS13D-203ENST00000466732 KCNMB2Q9Y691 235 aa7.61□□□□□ -1.19
VPS13D-203ENST00000466732 XYLBO75191 536 aa7.6□□□□□ -1.19
VPS13D-203ENST00000466732 SASH3O75995 380 aa7.6□□□□□ -1.19
VPS13D-203ENST00000466732 EGFRP00533 1210 aa7.6□□□□□ -1.19
VPS13D-203ENST00000466732 ADH7P40394 386 aa7.6□□□□□ -1.19
VPS13D-203ENST00000466732 GSK3AP49840 483 aa7.6□□□□□ -1.19
VPS13D-203ENST00000466732 B4GALNT3Q6L9W6 998 aa7.6□□□□□ -1.19
VPS13D-203ENST00000466732 PODNQ7Z5L7 613 aa7.6□□□□□ -1.19
VPS13D-203ENST00000466732 UBE2OQ9C0C9 1292 aaKnown RBP7.6□□□□□ -1.19
VPS13D-203ENST00000466732 ZFATQ9P243 1243 aa7.6□□□□□ -1.19
VPS13D-203ENST00000466732 MTMR7Q9Y216 660 aa7.6□□□□□ -1.19
VPS13D-203ENST00000466732 TARSP26639 723 aaKnown RBP7.59□□□□□ -1.19
VPS13D-203ENST00000466732 IRS1P35568 1242 aa7.59□□□□□ -1.19
VPS13D-203ENST00000466732 DGKGP49619 791 aa7.59□□□□□ -1.19
VPS13D-203ENST00000466732 PDE4CQ08493 712 aa7.59□□□□□ -1.19
VPS13D-203ENST00000466732 TBC1D8BQ0IIM8 1120 aa7.59□□□□□ -1.19
VPS13D-203ENST00000466732 LINC00114Q6XXX2 140 aa7.59□□□□□ -1.19
VPS13D-203ENST00000466732 PIK3R5Q8WYR1 880 aa7.59□□□□□ -1.19
VPS13D-203ENST00000466732 IGFLR1Q9H665 355 aa7.59□□□□□ -1.19
VPS13D-203ENST00000466732 FAM13BQ9NYF5 915 aa7.59□□□□□ -1.19
VPS13D-203ENST00000466732 MKL2Q9ULH7 1088 aa7.59□□□□□ -1.19
VPS13D-203ENST00000466732 PHF20L1A8MW92 1017 aa7.58□□□□□ -1.2
VPS13D-203ENST00000466732 MAP3K6O95382 1288 aa7.58□□□□□ -1.2
VPS13D-203ENST00000466732 RARAP10276 462 aa7.58□□□□□ -1.2
VPS13D-203ENST00000466732 MTMR3Q13615 1198 aa7.58□□□□□ -1.2
VPS13D-203ENST00000466732 TRIP4Q15650 581 aaPredicted RBP7.58□□□□□ -1.2
VPS13D-203ENST00000466732 GPR152Q8TDT2 470 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms