RNA–Protein interactions for RNA: ENST00000466032.1

CHMP3-206, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 436 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-206ENST00000466032 EIF4A1P60842 406 aaKnown RBP7.67□□□□□ -1.18
CHMP3-206ENST00000466032 KCNMA1Q12791 1236 aa7.67□□□□□ -1.18
CHMP3-206ENST00000466032 FAM98CQ17RN3 349 aaKnown RBP7.67□□□□□ -1.18
CHMP3-206ENST00000466032 TSR2Q969E8 191 aaKnown RBP7.67□□□□□ -1.18
CHMP3-206ENST00000466032 THUMPD2Q9BTF0 503 aaKnown RBP7.67□□□□□ -1.18
CHMP3-206ENST00000466032 DACH1Q9UI36 760 aa7.67□□□□□ -1.18
CHMP3-206ENST00000466032 SUPT16HQ9Y5B9 1047 aaKnown RBP7.67□□□□□ -1.18
CHMP3-206ENST00000466032 PTPRCP08575 1304 aa7.67□□□□□ -1.18
CHMP3-206ENST00000466032 HEG1Q9ULI3 1381 aa7.67□□□□□ -1.18
CHMP3-206ENST00000466032 KDM6AO15550 1401 aaPredicted RBP7.67□□□□□ -1.18
CHMP3-206ENST00000466032 CANXP27824 592 aaKnown RBP7.66□□□□□ -1.18
CHMP3-206ENST00000466032 ZKSCAN2Q63HK3 967 aa7.66□□□□□ -1.18
CHMP3-206ENST00000466032 API5Q9BZZ5 524 aaKnown RBP7.66□□□□□ -1.18
CHMP3-206ENST00000466032 SMC4Q9NTJ3 1288 aa7.66□□□□□ -1.18
CHMP3-206ENST00000466032 HPS5Q9UPZ3 1129 aa7.66□□□□□ -1.18
CHMP3-206ENST00000466032 THSD7AQ9UPZ6 1657 aa7.66□□□□□ -1.18
CHMP3-206ENST00000466032 SENP3-EIF4A1A0A087X0R7 540 aa7.65□□□□□ -1.18
CHMP3-206ENST00000466032 SIPA1L3O60292 1781 aaPredicted RBP7.65□□□□□ -1.18
CHMP3-206ENST00000466032 CACNA1FO60840 1977 aa7.65□□□□□ -1.18
CHMP3-206ENST00000466032 GIGYF1O75420 1035 aaPredicted RBP7.65□□□□□ -1.18
CHMP3-206ENST00000466032 RXRBP28702 533 aa7.65□□□□□ -1.18
CHMP3-206ENST00000466032 FOXK1P85037 733 aa7.65□□□□□ -1.18
CHMP3-206ENST00000466032 FAM196AQ6ZSG2 479 aa7.65□□□□□ -1.18
CHMP3-206ENST00000466032 C8orf58Q8NAV2 365 aa7.65□□□□□ -1.18
CHMP3-206ENST00000466032 TMUB1Q9BVT8 246 aa7.65□□□□□ -1.18
CHMP3-206ENST00000466032 DBF4Q9UBU7 674 aaPredicted RBP7.65□□□□□ -1.18
CHMP3-206ENST00000466032 KDM3BQ7LBC6 1761 aa7.64□□□□□ -1.19
CHMP3-206ENST00000466032 STARD3NLO95772 234 aa7.64□□□□□ -1.19
CHMP3-206ENST00000466032 DDX58O95786 925 aaKnown RBP7.64□□□□□ -1.19
CHMP3-206ENST00000466032 LCE3BQ5TA77 95 aa7.64□□□□□ -1.19
CHMP3-206ENST00000466032 HDGFL1Q5TGJ6 251 aa7.64□□□□□ -1.19
CHMP3-206ENST00000466032 ATF7IPQ6VMQ6 1270 aa7.64□□□□□ -1.19
CHMP3-206ENST00000466032 SEPT12Q8IYM1 358 aa7.64□□□□□ -1.19
CHMP3-206ENST00000466032 MARCH10Q8NA82 808 aaPredicted RBP7.64□□□□□ -1.19
CHMP3-206ENST00000466032 EMID1Q96A84 441 aaPredicted RBP7.64□□□□□ -1.19
CHMP3-206ENST00000466032 HYPKQ9NX55 129 aa7.64□□□□□ -1.19
CHMP3-206ENST00000466032 HDAC5Q9UQL6 1122 aa7.64□□□□□ -1.19
CHMP3-206ENST00000466032 SHANK3Q9BYB0 1731 aa7.64□□□□□ -1.19
CHMP3-206ENST00000466032 GLI3P10071 1580 aa7.63□□□□□ -1.19
CHMP3-206ENST00000466032 PROX2Q3B8N5 592 aa7.63□□□□□ -1.19
CHMP3-206ENST00000466032 KRT27Q7Z3Y8 459 aa7.63□□□□□ -1.19
CHMP3-206ENST00000466032 ZNF598Q86UK7 904 aaKnown RBP7.63□□□□□ -1.19
CHMP3-206ENST00000466032 FTSJ3Q8IY81 847 aaKnown RBP7.63□□□□□ -1.19
CHMP3-206ENST00000466032 SSH1Q8WYL5 1049 aa7.63□□□□□ -1.19
CHMP3-206ENST00000466032 PIGBQ92521 554 aa7.63□□□□□ -1.19
CHMP3-206ENST00000466032 MTRQ99707 1265 aa7.63□□□□□ -1.19
CHMP3-206ENST00000466032 ADAM33Q9BZ11 813 aa7.63□□□□□ -1.19
CHMP3-206ENST00000466032 MIS18AQ9NYP9 233 aa7.63□□□□□ -1.19
CHMP3-206ENST00000466032 VIRMAQ69YN4 1812 aaKnown RBP7.63□□□□□ -1.19
CHMP3-206ENST00000466032 IBTKQ9P2D0 1353 aaPredicted RBP7.62□□□□□ -1.19
CHMP3-206ENST00000466032 KRTAP4-8A0A0G2JLE6 195 aa7.62□□□□□ -1.19
CHMP3-206ENST00000466032 PPP1R3GB7ZBB8 358 aa7.62□□□□□ -1.19
CHMP3-206ENST00000466032 GDF9O60383 454 aa7.62□□□□□ -1.19
CHMP3-206ENST00000466032 BCAR3O75815 825 aa7.62□□□□□ -1.19
CHMP3-206ENST00000466032 PRIM1P49642 420 aaKnown RBP7.62□□□□□ -1.19
CHMP3-206ENST00000466032 NPM2Q86SE8 214 aaKnown RBP7.62□□□□□ -1.19
CHMP3-206ENST00000466032 DZIP1LQ8IYY4 767 aaKnown RBP7.62□□□□□ -1.19
CHMP3-206ENST00000466032 TSPYL6Q8N831 410 aa7.62□□□□□ -1.19
CHMP3-206ENST00000466032 KRTAP9-9Q9BYP9 154 aa7.62□□□□□ -1.19
CHMP3-206ENST00000466032 KRTAP9-4Q9BYQ2 154 aa7.62□□□□□ -1.19
CHMP3-206ENST00000466032 BCL11BQ9C0K0 894 aaPredicted RBP7.62□□□□□ -1.19
CHMP3-206ENST00000466032 DDX21Q9NR30 783 aaKnown RBP eCLIP7.62□□□□□ -1.19
CHMP3-206ENST00000466032 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.62□□□□□ -1.19
CHMP3-206ENST00000466032 DDX19BQ9UMR2 479 aa7.62□□□□□ -1.19
CHMP3-206ENST00000466032 ELL2O00472 640 aaPredicted RBP7.61□□□□□ -1.19
CHMP3-206ENST00000466032 RGL2O15211 777 aa7.61□□□□□ -1.19
CHMP3-206ENST00000466032 SPRYD7Q5W111 196 aa7.61□□□□□ -1.19
CHMP3-206ENST00000466032 PLPP6Q8IY26 295 aa7.61□□□□□ -1.19
CHMP3-206ENST00000466032 FRAT1Q92837 279 aaPredicted RBP7.61□□□□□ -1.19
CHMP3-206ENST00000466032 SYTL4Q96C24 671 aaPredicted RBP7.61□□□□□ -1.19
CHMP3-206ENST00000466032 ZNF496Q96IT1 587 aaPredicted RBP7.61□□□□□ -1.19
CHMP3-206ENST00000466032 ATG3Q9NT62 314 aa7.61□□□□□ -1.19
CHMP3-206ENST00000466032 ZNF831Q5JPB2 1677 aa7.6□□□□□ -1.19
CHMP3-206ENST00000466032 PAPPAQ13219 1627 aa7.6□□□□□ -1.19
CHMP3-206ENST00000466032 KAT6BQ8WYB5 2073 aa7.6□□□□□ -1.19
CHMP3-206ENST00000466032 EIF2S2P20042 333 aaKnown RBP7.6□□□□□ -1.19
CHMP3-206ENST00000466032 SLC19A1P41440 591 aa7.6□□□□□ -1.19
CHMP3-206ENST00000466032 CCT4P50991 539 aaKnown RBP7.6□□□□□ -1.19
CHMP3-206ENST00000466032 FLIIQ13045 1269 aa7.6□□□□□ -1.19
CHMP3-206ENST00000466032 SLC39A6Q13433 755 aa7.6□□□□□ -1.19
CHMP3-206ENST00000466032 PPP4R2Q9NY27 417 aa7.6□□□□□ -1.19
CHMP3-206ENST00000466032 NOB1Q9ULX3 412 aaKnown RBP7.6□□□□□ -1.19
CHMP3-206ENST00000466032 UBR2Q8IWV8 1755 aa7.6□□□□□ -1.19
CHMP3-206ENST00000466032 LOC102724428A0A0B4J2F2 783 aa7.59□□□□□ -1.19
CHMP3-206ENST00000466032 TRIM27P14373 513 aa7.59□□□□□ -1.19
CHMP3-206ENST00000466032 GGCXP38435 758 aa7.59□□□□□ -1.19
CHMP3-206ENST00000466032 SIK1P57059 783 aa7.59□□□□□ -1.19
CHMP3-206ENST00000466032 MVPQ14764 893 aaKnown RBP7.59□□□□□ -1.19
CHMP3-206ENST00000466032 SLC27A3Q5K4L6 730 aa7.59□□□□□ -1.19
CHMP3-206ENST00000466032 RC3H1Q5TC82 1133 aaKnown RBP7.59□□□□□ -1.19
CHMP3-206ENST00000466032 INTS3Q68E01 1043 aaKnown RBP7.59□□□□□ -1.19
CHMP3-206ENST00000466032 ZNF516Q92618 1163 aa7.59□□□□□ -1.19
CHMP3-206ENST00000466032 ZDHHC16Q969W1 377 aa7.59□□□□□ -1.19
CHMP3-206ENST00000466032 ASAP1Q9ULH1 1129 aa7.59□□□□□ -1.19
CHMP3-206ENST00000466032 PXDNLA1KZ92 1463 aa7.59□□□□□ -1.19
CHMP3-206ENST00000466032 RGS12O14924 1447 aa7.59□□□□□ -1.19
CHMP3-206ENST00000466032 CICQ96RK0 1608 aaPredicted RBP7.59□□□□□ -1.19
CHMP3-206ENST00000466032 ITGB4P16144 1822 aa7.59□□□□□ -1.19
CHMP3-206ENST00000466032 PALLDQ8WX93 1383 aa7.59□□□□□ -1.2
CHMP3-206ENST00000466032 KCPQ6ZWJ8 1503 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms