RNA–Protein interactions for RNA: ENST00000465957.1

HPS1-207, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 2

Gene HPS1, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-207ENST00000465957 DDX21Q9NR30 783 aaKnown RBP eCLIP21.22■□□□□ 0.99
HPS1-207ENST00000465957 DICER1Q9UPY3 1922 aaKnown RBP21.21■□□□□ 0.99
HPS1-207ENST00000465957 APLP1P51693 650 aa21.21■□□□□ 0.99
HPS1-207ENST00000465957 FAM9BQ8IZU0 186 aa21.21■□□□□ 0.99
HPS1-207ENST00000465957 CFAP44Q96MT7 982 aa21.21■□□□□ 0.99
HPS1-207ENST00000465957 ZNF277Q9NRM2 450 aaPredicted RBP21.21■□□□□ 0.99
HPS1-207ENST00000465957 CHPF2Q9P2E5 772 aa21.21■□□□□ 0.99
HPS1-207ENST00000465957 IBTKQ9P2D0 1353 aaPredicted RBP21.21■□□□□ 0.99
HPS1-207ENST00000465957 FKBP4Q02790 459 aaKnown RBP eCLIP21.2■□□□□ 0.98
HPS1-207ENST00000465957 FSTL1Q12841 308 aa21.2■□□□□ 0.98
HPS1-207ENST00000465957 PARP10Q53GL7 1025 aa21.2■□□□□ 0.98
HPS1-207ENST00000465957 PPP1R42Q7Z4L9 355 aa21.2■□□□□ 0.98
HPS1-207ENST00000465957 RPGRQ92834 1020 aaKnown RBP21.2■□□□□ 0.98
HPS1-207ENST00000465957 MBIPQ9NS73 344 aa21.2■□□□□ 0.98
HPS1-207ENST00000465957 DDNO94850 711 aaPredicted RBP21.19■□□□□ 0.98
HPS1-207ENST00000465957 HTRA3P83110 453 aa21.19■□□□□ 0.98
HPS1-207ENST00000465957 HDGFL1Q5TGJ6 251 aa21.19■□□□□ 0.98
HPS1-207ENST00000465957 SLC51AQ86UW1 340 aa21.19■□□□□ 0.98
HPS1-207ENST00000465957 UTP14AQ9BVJ6 771 aaKnown RBP21.19■□□□□ 0.98
HPS1-207ENST00000465957 ZNF853P0CG23 659 aa21.18■□□□□ 0.98
HPS1-207ENST00000465957 HOXA10P31260 410 aaPredicted RBP21.18■□□□□ 0.98
HPS1-207ENST00000465957 DIEXFQ68CQ4 756 aaKnown RBP21.18■□□□□ 0.98
HPS1-207ENST00000465957 RTKN2Q8IZC4 609 aa21.18■□□□□ 0.98
HPS1-207ENST00000465957 ZNF428Q96B54 188 aa21.18■□□□□ 0.98
HPS1-207ENST00000465957 RIC1Q4ADV7 1423 aa21.18■□□□□ 0.98
HPS1-207ENST00000465957 TCERG1O14776 1098 aaKnown RBP21.17■□□□□ 0.98
HPS1-207ENST00000465957 DUSP27Q5VZP5 1158 aa21.17■□□□□ 0.98
HPS1-207ENST00000465957 NLRP10Q86W26 655 aa21.17■□□□□ 0.98
HPS1-207ENST00000465957 SYNE4Q8N205 404 aa21.17■□□□□ 0.98
HPS1-207ENST00000465957 SMC1BQ8NDV3 1235 aa21.17■□□□□ 0.98
HPS1-207ENST00000465957 TCIRG1Q13488 830 aa21.16■□□□□ 0.98
HPS1-207ENST00000465957 SLC10A5Q5PT55 438 aa21.16■□□□□ 0.98
HPS1-207ENST00000465957 DNAJC5GQ8N7S2 189 aa21.16■□□□□ 0.98
HPS1-207ENST00000465957 RBM17Q96I25 401 aaKnown RBP21.16■□□□□ 0.98
HPS1-207ENST00000465957 WDR90Q96KV7 1748 aa21.15■□□□□ 0.98
HPS1-207ENST00000465957 HOXB7P09629 217 aa21.15■□□□□ 0.98
HPS1-207ENST00000465957 HSP90AB3PQ58FF7 597 aa21.15■□□□□ 0.98
HPS1-207ENST00000465957 NLRP3Q96P20 1036 aa21.15■□□□□ 0.98
HPS1-207ENST00000465957 CRAMP1Q96RY5 1269 aa21.15■□□□□ 0.98
HPS1-207ENST00000465957 SNED1Q8TER0 1413 aa21.14■□□□□ 0.98
HPS1-207ENST00000465957 ELL2O00472 640 aaPredicted RBP21.14■□□□□ 0.97
HPS1-207ENST00000465957 HCLS1P14317 486 aaPredicted RBP21.14■□□□□ 0.97
HPS1-207ENST00000465957 IFT57Q9NWB7 429 aa21.14■□□□□ 0.97
HPS1-207ENST00000465957 DBF4Q9UBU7 674 aaPredicted RBP21.14■□□□□ 0.97
HPS1-207ENST00000465957 IARSP41252 1262 aaKnown RBP21.13■□□□□ 0.97
HPS1-207ENST00000465957 GNAI1P63096 354 aa21.13■□□□□ 0.97
HPS1-207ENST00000465957 ANKRD13DQ6ZTN6 518 aa21.13■□□□□ 0.97
HPS1-207ENST00000465957 MIER1Q8N108 512 aa21.13■□□□□ 0.97
HPS1-207ENST00000465957 TRMT112Q9UI30 125 aaKnown RBP21.13■□□□□ 0.97
HPS1-207ENST00000465957 SALL2Q9Y467 1007 aaPredicted RBP21.13■□□□□ 0.97
HPS1-207ENST00000465957 ZNF541Q9H0D2 1346 aa21.12■□□□□ 0.97
HPS1-207ENST00000465957 PPEF1O14829 653 aaPredicted RBP21.12■□□□□ 0.97
HPS1-207ENST00000465957 HOXD11P31277 338 aaPredicted RBP21.12■□□□□ 0.97
HPS1-207ENST00000465957 PLBD2Q8NHP8 589 aa21.12■□□□□ 0.97
HPS1-207ENST00000465957 ANKRD36CQ5JPF3 1778 aa21.12■□□□□ 0.97
HPS1-207ENST00000465957 POTEIP0CG38 1075 aa21.11■□□□□ 0.97
HPS1-207ENST00000465957 POTEJP0CG39 1038 aa21.11■□□□□ 0.97
HPS1-207ENST00000465957 CALD1Q05682 793 aaKnown RBP21.11■□□□□ 0.97
HPS1-207ENST00000465957 CC2D2BQ6DHV5 1058 aa21.11■□□□□ 0.97
HPS1-207ENST00000465957 PSMD1Q99460 953 aa21.11■□□□□ 0.97
HPS1-207ENST00000465957 HYPKQ9NX55 129 aa21.11■□□□□ 0.97
HPS1-207ENST00000465957 ATP5J2-PTCD1G3V325 749 aa21.1■□□□□ 0.97
HPS1-207ENST00000465957 CCER2I3L3R5 266 aa21.1■□□□□ 0.97
HPS1-207ENST00000465957 WWC1Q8IX03 1113 aa21.1■□□□□ 0.97
HPS1-207ENST00000465957 C8orf58Q8NAV2 365 aa21.1■□□□□ 0.97
HPS1-207ENST00000465957 ABCC4O15439 1325 aa21.09■□□□□ 0.97
HPS1-207ENST00000465957 RNF123Q5XPI4 1314 aa21.09■□□□□ 0.97
HPS1-207ENST00000465957 SH3TC1Q8TE82 1336 aa21.09■□□□□ 0.97
HPS1-207ENST00000465957 FZD9O00144 591 aa21.08■□□□□ 0.97
HPS1-207ENST00000465957 CCDC27Q2M243 656 aa21.08■□□□□ 0.97
HPS1-207ENST00000465957 L3MBTL3Q96JM7 780 aaPredicted RBP21.08■□□□□ 0.97
HPS1-207ENST00000465957 ISCA1Q9BUE6 129 aa21.08■□□□□ 0.97
HPS1-207ENST00000465957 PHAXQ9H814 394 aaKnown RBP21.08■□□□□ 0.97
HPS1-207ENST00000465957 COL4A5P29400 1685 aa21.08■□□□□ 0.96
HPS1-207ENST00000465957 JDP2Q8WYK2 163 aa21.07■□□□□ 0.96
HPS1-207ENST00000465957 FAM89AQ96GI7 184 aa21.07■□□□□ 0.96
HPS1-207ENST00000465957 ATP6V0A2Q9Y487 856 aa21.07■□□□□ 0.96
HPS1-207ENST00000465957 PCNTO95613 3336 aa21.07■□□□□ 0.96
HPS1-207ENST00000465957 LAMB2P55268 1798 aa21.06■□□□□ 0.96
HPS1-207ENST00000465957 RTL5Q5HYW3 569 aaPredicted RBP21.06■□□□□ 0.96
HPS1-207ENST00000465957 TAF1DQ9H5J8 278 aaPredicted RBP21.06■□□□□ 0.96
HPS1-207ENST00000465957 IQCA1LA6NCM1 817 aa21.05■□□□□ 0.96
HPS1-207ENST00000465957 GRIPAP1Q4V328 841 aa21.05■□□□□ 0.96
HPS1-207ENST00000465957 NCBP3Q53F19 620 aaKnown RBP21.05■□□□□ 0.96
HPS1-207ENST00000465957 CHADLQ6NUI6 762 aa21.05■□□□□ 0.96
HPS1-207ENST00000465957 RIC3Q7Z5B4 369 aa21.05■□□□□ 0.96
HPS1-207ENST00000465957 LARGE2Q8N3Y3 721 aa21.05■□□□□ 0.96
HPS1-207ENST00000465957 TSPYL6Q8N831 410 aa21.05■□□□□ 0.96
HPS1-207ENST00000465957 TSR2Q969E8 191 aaKnown RBP21.05■□□□□ 0.96
HPS1-207ENST00000465957 KLRG1Q96E93 195 aa21.05■□□□□ 0.96
HPS1-207ENST00000465957 BBOX1O75936 387 aa21.04■□□□□ 0.96
HPS1-207ENST00000465957 DDX46Q7L014 1031 aaKnown RBP21.04■□□□□ 0.96
HPS1-207ENST00000465957 TMX4Q9H1E5 349 aaPredicted RBP21.04■□□□□ 0.96
HPS1-207ENST00000465957 RNF216Q9NWF9 866 aaPredicted RBP21.04■□□□□ 0.96
HPS1-207ENST00000465957 GPC2Q8N158 579 aa21.03■□□□□ 0.96
HPS1-207ENST00000465957 HACL1Q9UJ83 578 aa21.03■□□□□ 0.96
HPS1-207ENST00000465957 GJA3Q9Y6H8 435 aa21.03■□□□□ 0.96
HPS1-207ENST00000465957 SCN4AP35499 1836 aa21.02■□□□□ 0.96
HPS1-207ENST00000465957 GOLGA2Q08379 1002 aa21.02■□□□□ 0.96
HPS1-207ENST00000465957 TRIM28Q13263 835 aaKnown RBP21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms