RNA–Protein interactions for RNA: ENST00000465756.5

NPHP3-203, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 3,852 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-203ENST00000465756 G3V3G9 751 aa13.64□□□□□ -0.23
NPHP3-203ENST00000465756 ALDH1L2Q3SY69 923 aa13.64□□□□□ -0.23
NPHP3-203ENST00000465756 DCAF8Q5TAQ9 597 aa13.64□□□□□ -0.23
NPHP3-203ENST00000465756 CDC5LQ99459 802 aaKnown RBP13.64□□□□□ -0.23
NPHP3-203ENST00000465756 BBOX1O75936 387 aa13.64□□□□□ -0.23
NPHP3-203ENST00000465756 DNAAF4Q8WXU2 420 aa13.64□□□□□ -0.23
NPHP3-203ENST00000465756 FLIIQ13045 1269 aa13.64□□□□□ -0.23
NPHP3-203ENST00000465756 TAOK3Q9H2K8 898 aa13.64□□□□□ -0.23
NPHP3-203ENST00000465756 KIF16BQ96L93 1317 aa13.63□□□□□ -0.23
NPHP3-203ENST00000465756 ANXA1P04083 346 aa13.63□□□□□ -0.23
NPHP3-203ENST00000465756 CHMP4BQ9H444 224 aaKnown RBP13.63□□□□□ -0.23
NPHP3-203ENST00000465756 PTPRCP08575 1304 aa13.63□□□□□ -0.23
NPHP3-203ENST00000465756 HLFQ16534 295 aa13.63□□□□□ -0.23
NPHP3-203ENST00000465756 NLRP10Q86W26 655 aa13.63□□□□□ -0.23
NPHP3-203ENST00000465756 JDP2Q8WYK2 163 aa13.63□□□□□ -0.23
NPHP3-203ENST00000465756 SMC4Q9NTJ3 1288 aa13.63□□□□□ -0.23
NPHP3-203ENST00000465756 CHRNA5P30532 468 aa13.63□□□□□ -0.23
NPHP3-203ENST00000465756 SLC10A5Q5PT55 438 aa13.63□□□□□ -0.23
NPHP3-203ENST00000465756 MIER1Q8N108 512 aa13.62□□□□□ -0.23
NPHP3-203ENST00000465756 MAP3K2Q9Y2U5 619 aa13.62□□□□□ -0.23
NPHP3-203ENST00000465756 ALDH1L1O75891 902 aa13.62□□□□□ -0.23
NPHP3-203ENST00000465756 PCCAP05165 728 aaPredicted RBP13.62□□□□□ -0.23
NPHP3-203ENST00000465756 LMNB1P20700 586 aa13.62□□□□□ -0.23
NPHP3-203ENST00000465756 TAF7LQ5H9L4 462 aa13.62□□□□□ -0.23
NPHP3-203ENST00000465756 LINS1Q8NG48 757 aa13.62□□□□□ -0.23
NPHP3-203ENST00000465756 EYA3Q99504 573 aa13.62□□□□□ -0.23
NPHP3-203ENST00000465756 C9orf78Q9NZ63 289 aaPredicted RBP13.62□□□□□ -0.23
NPHP3-203ENST00000465756 ISCA1Q9BUE6 129 aa13.62□□□□□ -0.23
NPHP3-203ENST00000465756 SLFN5Q08AF3 891 aa13.61□□□□□ -0.23
NPHP3-203ENST00000465756 KRT24Q2M2I5 525 aa13.61□□□□□ -0.23
NPHP3-203ENST00000465756 SUSD4Q5VX71 490 aa13.61□□□□□ -0.23
NPHP3-203ENST00000465756 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.61□□□□□ -0.23
NPHP3-203ENST00000465756 ZBTB38Q8NAP3 1195 aaPredicted RBP13.61□□□□□ -0.23
NPHP3-203ENST00000465756 IRS4O14654 1257 aaPredicted RBP13.61□□□□□ -0.23
NPHP3-203ENST00000465756 PDE8AO60658 829 aa13.61□□□□□ -0.23
NPHP3-203ENST00000465756 SRGNP10124 158 aa13.61□□□□□ -0.23
NPHP3-203ENST00000465756 PDIA6Q15084 440 aa13.61□□□□□ -0.23
NPHP3-203ENST00000465756 SRCIN1Q9C0H9 1055 aa13.61□□□□□ -0.23
NPHP3-203ENST00000465756 VAMP4O75379 141 aa13.6□□□□□ -0.23
NPHP3-203ENST00000465756 PROSER3Q2NL68 480 aa13.6□□□□□ -0.23
NPHP3-203ENST00000465756 ERFEQ4G0M1 354 aa13.6□□□□□ -0.23
NPHP3-203ENST00000465756 VPS33BQ9H267 617 aa13.6□□□□□ -0.23
NPHP3-203ENST00000465756 GPBP1L1Q9HC44 474 aaPredicted RBP13.6□□□□□ -0.23
NPHP3-203ENST00000465756 RNF181Q9P0P0 153 aa13.6□□□□□ -0.23
NPHP3-203ENST00000465756 BCORQ6W2J9 1755 aa13.6□□□□□ -0.23
NPHP3-203ENST00000465756 PI4KAP2A4QPH2 592 aa13.6□□□□□ -0.23
NPHP3-203ENST00000465756 PI4KAP1Q8N8J0 262 aa13.6□□□□□ -0.23
NPHP3-203ENST00000465756 NTSR2O95665 410 aa13.6□□□□□ -0.23
NPHP3-203ENST00000465756 IGHMBP2P38935 993 aaKnown RBP13.6□□□□□ -0.23
NPHP3-203ENST00000465756 PRPF40BQ6NWY9 871 aaKnown RBP13.6□□□□□ -0.23
NPHP3-203ENST00000465756 BCL11AQ9H165 835 aa13.6□□□□□ -0.23
NPHP3-203ENST00000465756 PPEF1O14829 653 aaPredicted RBP13.59□□□□□ -0.23
NPHP3-203ENST00000465756 ATP5J2-PTCD1G3V325 749 aa13.59□□□□□ -0.23
NPHP3-203ENST00000465756 HOXA10P31260 410 aaPredicted RBP13.59□□□□□ -0.23
NPHP3-203ENST00000465756 EIF6P56537 245 aaKnown RBP13.59□□□□□ -0.23
NPHP3-203ENST00000465756 NUTM1Q86Y26 1132 aa13.59□□□□□ -0.23
NPHP3-203ENST00000465756 CDHR2Q9BYE9 1310 aa13.58□□□□□ -0.24
NPHP3-203ENST00000465756 LTBP3Q9NS15 1303 aa13.58□□□□□ -0.24
NPHP3-203ENST00000465756 SLC4A10Q6U841 1118 aa13.58□□□□□ -0.24
NPHP3-203ENST00000465756 CACNA1FO60840 1977 aa13.58□□□□□ -0.24
NPHP3-203ENST00000465756 CCT4P50991 539 aaKnown RBP13.58□□□□□ -0.24
NPHP3-203ENST00000465756 ZNF219Q9P2Y4 722 aaPredicted RBP13.58□□□□□ -0.24
NPHP3-203ENST00000465756 WWC3Q9ULE0 1092 aa13.58□□□□□ -0.24
NPHP3-203ENST00000465756 ANKRD18AQ8IVF6 992 aa13.58□□□□□ -0.24
NPHP3-203ENST00000465756 GRAPQ13588 217 aa13.57□□□□□ -0.24
NPHP3-203ENST00000465756 C9orf131Q5VYM1 1079 aa13.57□□□□□ -0.24
NPHP3-203ENST00000465756 TSPYL6Q8N831 410 aa13.57□□□□□ -0.24
NPHP3-203ENST00000465756 GRAPLQ8TC17 118 aaPredicted RBP13.57□□□□□ -0.24
NPHP3-203ENST00000465756 C21orf2O43822 256 aa13.57□□□□□ -0.24
NPHP3-203ENST00000465756 FKBP4Q02790 459 aaKnown RBP eCLIP13.57□□□□□ -0.24
NPHP3-203ENST00000465756 KLRG2A4D1S0 409 aaPredicted RBP13.56□□□□□ -0.24
NPHP3-203ENST00000465756 YBX3P16989 372 aaKnown RBP eCLIP13.56□□□□□ -0.24
NPHP3-203ENST00000465756 NIM1KQ8IY84 436 aa13.56□□□□□ -0.24
NPHP3-203ENST00000465756 PHAXQ9H814 394 aaKnown RBP13.56□□□□□ -0.24
NPHP3-203ENST00000465756 ZBED9Q6R2W3 1325 aa13.56□□□□□ -0.24
NPHP3-203ENST00000465756 SF3B3Q15393 1217 aaKnown RBP13.56□□□□□ -0.24
NPHP3-203ENST00000465756 TCERG1O14776 1098 aaKnown RBP13.56□□□□□ -0.24
NPHP3-203ENST00000465756 MPNDQ8N594 471 aa13.56□□□□□ -0.24
NPHP3-203ENST00000465756 MPHOSPH8Q99549 860 aa13.56□□□□□ -0.24
NPHP3-203ENST00000465756 CHMP3Q9Y3E7 222 aa13.56□□□□□ -0.24
NPHP3-203ENST00000465756 LMOD1P29536 600 aaPredicted RBP13.55□□□□□ -0.24
NPHP3-203ENST00000465756 KCNJ4P48050 445 aa13.55□□□□□ -0.24
NPHP3-203ENST00000465756 DPP8Q6V1X1 898 aaPredicted RBP13.55□□□□□ -0.24
NPHP3-203ENST00000465756 SP8Q8IXZ3 490 aa13.55□□□□□ -0.24
NPHP3-203ENST00000465756 CCDC24Q8N4L8 307 aa13.55□□□□□ -0.24
NPHP3-203ENST00000465756 KIF13BQ9NQT8 1826 aa13.55□□□□□ -0.24
NPHP3-203ENST00000465756 SENP3-EIF4A1A0A087X0R7 540 aa13.55□□□□□ -0.24
NPHP3-203ENST00000465756 ANKRD2Q9GZV1 360 aa13.55□□□□□ -0.24
NPHP3-203ENST00000465756 CHD4Q14839 1912 aa13.55□□□□□ -0.24
NPHP3-203ENST00000465756 ANKRD18BA2A2Z9 1011 aa13.55□□□□□ -0.24
NPHP3-203ENST00000465756 IQCA1LA6NCM1 817 aa13.55□□□□□ -0.24
NPHP3-203ENST00000465756 CRY2Q49AN0 593 aa13.55□□□□□ -0.24
NPHP3-203ENST00000465756 ZNF521Q96K83 1311 aa13.54□□□□□ -0.24
NPHP3-203ENST00000465756 HCLS1P14317 486 aaPredicted RBP13.54□□□□□ -0.24
NPHP3-203ENST00000465756 LARGE2Q8N3Y3 721 aa13.54□□□□□ -0.24
NPHP3-203ENST00000465756 ERICH6Q7L0X2 663 aa13.54□□□□□ -0.24
NPHP3-203ENST00000465756 UBN2Q6ZU65 1347 aa13.54□□□□□ -0.24
NPHP3-203ENST00000465756 FTSJ3Q8IY81 847 aaKnown RBP13.54□□□□□ -0.24
NPHP3-203ENST00000465756 FAM89AQ96GI7 184 aa13.54□□□□□ -0.24
NPHP3-203ENST00000465756 NUP98P52948 1817 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms