RNA–Protein interactions for RNA: ENST00000465505.2

SNX4-202, Transcript of sorting nexin 4, humanhuman

TSL 5

Gene SNX4, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-202ENST00000465505 FAM196BA6NMK8 535 aa6.27□□□□□ -1.41
SNX4-202ENST00000465505 IGFBP4P22692 258 aa6.27□□□□□ -1.41
SNX4-202ENST00000465505 ADH7P40394 386 aa6.27□□□□□ -1.41
SNX4-202ENST00000465505 NEUROD1Q13562 356 aa6.27□□□□□ -1.41
SNX4-202ENST00000465505 C20orf204Q6ZNR8 217 aa6.27□□□□□ -1.41
SNX4-202ENST00000465505 NGLY1Q96IV0 654 aa6.27□□□□□ -1.41
SNX4-202ENST00000465505 DMGDHQ9UI17 866 aaKnown RBP6.27□□□□□ -1.41
SNX4-202ENST00000465505 USP17L15C9J2P7 530 aa6.26□□□□□ -1.41
SNX4-202ENST00000465505 USP17L10C9JJH3 530 aa6.26□□□□□ -1.41
SNX4-202ENST00000465505 USP17L13C9JLJ4 530 aa6.26□□□□□ -1.41
SNX4-202ENST00000465505 USP17L12C9JPN9 530 aa6.26□□□□□ -1.41
SNX4-202ENST00000465505 USP17L11C9JVI0 530 aa6.26□□□□□ -1.41
SNX4-202ENST00000465505 USP17L21D6R901 530 aa6.26□□□□□ -1.41
SNX4-202ENST00000465505 USP17L18D6R9N7 530 aa6.26□□□□□ -1.41
SNX4-202ENST00000465505 USP17L22D6RA61 530 aa6.26□□□□□ -1.41
SNX4-202ENST00000465505 USP17L17D6RBQ6 530 aa6.26□□□□□ -1.41
SNX4-202ENST00000465505 USP17L19D6RCP7 530 aa6.26□□□□□ -1.41
SNX4-202ENST00000465505 USP17L20D6RJB6 530 aa6.26□□□□□ -1.41
SNX4-202ENST00000465505 ALBP02768 609 aa6.26□□□□□ -1.41
SNX4-202ENST00000465505 SPATA31C1P0DKV0 1188 aa6.26□□□□□ -1.41
SNX4-202ENST00000465505 USP17L24Q0WX57 530 aa6.26□□□□□ -1.41
SNX4-202ENST00000465505 HIF1AQ16665 826 aa6.26□□□□□ -1.41
SNX4-202ENST00000465505 RTN1Q16799 776 aa6.26□□□□□ -1.41
SNX4-202ENST00000465505 C8orf86Q6ZUL3 223 aa6.26□□□□□ -1.41
SNX4-202ENST00000465505 ARXQ96QS3 562 aa6.26□□□□□ -1.41
SNX4-202ENST00000465505 BCS1LQ9Y276 419 aa6.26□□□□□ -1.41
SNX4-202ENST00000465505 IER5Q5VY09 327 aa6.25□□□□□ -1.41
SNX4-202ENST00000465505 BHMTQ93088 406 aa6.25□□□□□ -1.41
SNX4-202ENST00000465505 GSX2Q9BZM3 304 aa6.25□□□□□ -1.41
SNX4-202ENST00000465505 SPDYE3A6NKU9 549 aa6.24□□□□□ -1.41
SNX4-202ENST00000465505 TGFBR3LH3BV60 316 aa6.24□□□□□ -1.41
SNX4-202ENST00000465505 NID1P14543 1247 aa6.24□□□□□ -1.41
SNX4-202ENST00000465505 WEE1P30291 646 aa6.24□□□□□ -1.41
SNX4-202ENST00000465505 CFAP70Q5T0N1 1121 aa6.24□□□□□ -1.41
SNX4-202ENST00000465505 EFCC1Q9HA90 598 aa6.24□□□□□ -1.41
SNX4-202ENST00000465505 ZNF777Q9ULD5 760 aaPredicted RBP6.24□□□□□ -1.41
SNX4-202ENST00000465505 GRNP28799 593 aaKnown RBP6.23□□□□□ -1.41
SNX4-202ENST00000465505 GATA4P43694 442 aa6.23□□□□□ -1.41
SNX4-202ENST00000465505 PRRT3Q5FWE3 981 aa6.23□□□□□ -1.41
SNX4-202ENST00000465505 INPP5BP32019 993 aa6.22□□□□□ -1.41
SNX4-202ENST00000465505 TRIM28Q13263 835 aaKnown RBP6.22□□□□□ -1.41
SNX4-202ENST00000465505 CCINQ13939 588 aa6.22□□□□□ -1.41
SNX4-202ENST00000465505 DOC2BQ14184 412 aa6.22□□□□□ -1.41
SNX4-202ENST00000465505 IGFLR1Q9H665 355 aa6.22□□□□□ -1.41
SNX4-202ENST00000465505 KLK14Q9P0G3 267 aa6.22□□□□□ -1.41
SNX4-202ENST00000465505 FAM229AH3BQW9 127 aa6.21□□□□□ -1.42
SNX4-202ENST00000465505 LILRB5O75023 590 aa6.21□□□□□ -1.42
SNX4-202ENST00000465505 CDCA8Q53HL2 280 aa6.21□□□□□ -1.42
SNX4-202ENST00000465505 ILDR2Q71H61 639 aa6.21□□□□□ -1.42
SNX4-202ENST00000465505 UBE2OQ9C0C9 1292 aaKnown RBP6.21□□□□□ -1.42
SNX4-202ENST00000465505 QTRT2Q9H974 415 aaKnown RBP6.21□□□□□ -1.42
SNX4-202ENST00000465505 SLC6A14Q9UN76 642 aa6.21□□□□□ -1.42
SNX4-202ENST00000465505 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.21□□□□□ -1.42
SNX4-202ENST00000465505 FOXO3O43524 673 aa6.2□□□□□ -1.42
SNX4-202ENST00000465505 ITGB7P26010 798 aa6.2□□□□□ -1.42
SNX4-202ENST00000465505 TBC1D8BQ0IIM8 1120 aa6.2□□□□□ -1.42
SNX4-202ENST00000465505 DGKZQ13574 1117 aa6.2□□□□□ -1.42
SNX4-202ENST00000465505 GRIK4Q16099 956 aa6.2□□□□□ -1.42
SNX4-202ENST00000465505 FAM200AQ8TCP9 573 aa6.2□□□□□ -1.42
SNX4-202ENST00000465505 DNAJB12Q9NXW2 375 aaKnown RBP6.2□□□□□ -1.42
SNX4-202ENST00000465505 APBA3O96018 575 aa6.19□□□□□ -1.42
SNX4-202ENST00000465505 NFKB1P19838 968 aa6.19□□□□□ -1.42
SNX4-202ENST00000465505 RFX1P22670 979 aa6.19□□□□□ -1.42
SNX4-202ENST00000465505 IDH3AP50213 366 aa6.19□□□□□ -1.42
SNX4-202ENST00000465505 C11orf91Q3C1V1 193 aa6.19□□□□□ -1.42
SNX4-202ENST00000465505 TRAPPC3LQ5T215 181 aa6.19□□□□□ -1.42
SNX4-202ENST00000465505 NUDT8Q8WV74 236 aa6.19□□□□□ -1.42
SNX4-202ENST00000465505 MYO19Q96H55 970 aa6.19□□□□□ -1.42
SNX4-202ENST00000465505 PNMA5Q96PV4 448 aa6.19□□□□□ -1.42
SNX4-202ENST00000465505 C11orf16Q9NQ32 467 aa6.19□□□□□ -1.42
SNX4-202ENST00000465505 LRFN2Q9ULH4 789 aa6.19□□□□□ -1.42
SNX4-202ENST00000465505 MICAL2O94851 1124 aa6.18□□□□□ -1.42
SNX4-202ENST00000465505 MAP3K6O95382 1288 aa6.18□□□□□ -1.42
SNX4-202ENST00000465505 EPB42P16452 691 aa6.18□□□□□ -1.42
SNX4-202ENST00000465505 AFF1P51825 1210 aaKnown RBP6.18□□□□□ -1.42
SNX4-202ENST00000465505 XP32Q5T750 250 aa6.18□□□□□ -1.42
SNX4-202ENST00000465505 PSAPL1Q6NUJ1 521 aa6.18□□□□□ -1.42
SNX4-202ENST00000465505 SEMA6BQ9H3T3 888 aa6.18□□□□□ -1.42
SNX4-202ENST00000465505 JPH1Q9HDC5 661 aaPredicted RBP6.18□□□□□ -1.42
SNX4-202ENST00000465505 ZFATQ9P243 1243 aa6.18□□□□□ -1.42
SNX4-202ENST00000465505 NAGPAQ9UK23 515 aa6.18□□□□□ -1.42
SNX4-202ENST00000465505 A0A0A0MRY4 1105 aa6.17□□□□□ -1.42
SNX4-202ENST00000465505 ZBTB42B2RXF5 422 aa6.17□□□□□ -1.42
SNX4-202ENST00000465505 OPLAHO14841 1288 aa6.17□□□□□ -1.42
SNX4-202ENST00000465505 TARSP26639 723 aaKnown RBP6.17□□□□□ -1.42
SNX4-202ENST00000465505 ARSDP51689 593 aa6.17□□□□□ -1.42
SNX4-202ENST00000465505 RSPO4Q2I0M5 234 aaPredicted RBP6.17□□□□□ -1.42
SNX4-202ENST00000465505 NKAPLQ5M9Q1 402 aa6.17□□□□□ -1.42
SNX4-202ENST00000465505 IFT43Q96FT9 208 aa6.17□□□□□ -1.42
SNX4-202ENST00000465505 NACC1Q96RE7 527 aa6.17□□□□□ -1.42
SNX4-202ENST00000465505 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.17□□□□□ -1.42
SNX4-202ENST00000465505 TPSG1Q9NRR2 321 aa6.17□□□□□ -1.42
SNX4-202ENST00000465505 RGS9O75916 674 aaPredicted RBP6.16□□□□□ -1.42
SNX4-202ENST00000465505 SELPP16109 830 aa6.16□□□□□ -1.42
SNX4-202ENST00000465505 SRPK2P78362 688 aaKnown RBP6.16□□□□□ -1.42
SNX4-202ENST00000465505 TRPM4Q8TD43 1214 aa6.16□□□□□ -1.42
SNX4-202ENST00000465505 VTI1AQ96AJ9 217 aa6.16□□□□□ -1.42
SNX4-202ENST00000465505 NOVA2Q9UNW9 492 aaKnown RBP6.16□□□□□ -1.42
SNX4-202ENST00000465505 C9orf172C9J069 976 aa6.15□□□□□ -1.42
SNX4-202ENST00000465505 SASH3O75995 380 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms