RNA–Protein interactions for RNA: ENST00000465441.1

CSPG5-204, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 4

Gene CSPG5, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-204ENST00000465441 PARP10Q53GL7 1025 aa27.31■■□□□ 1.96
CSPG5-204ENST00000465441 COPS6Q7L5N1 327 aa27.31■■□□□ 1.96
CSPG5-204ENST00000465441 LAS1LQ9Y4W2 734 aaKnown RBP27.31■■□□□ 1.96
CSPG5-204ENST00000465441 POTEIP0CG38 1075 aa27.3■■□□□ 1.96
CSPG5-204ENST00000465441 POTEJP0CG39 1038 aa27.3■■□□□ 1.96
CSPG5-204ENST00000465441 IARSP41252 1262 aaKnown RBP27.3■■□□□ 1.96
CSPG5-204ENST00000465441 KRT24Q2M2I5 525 aa27.3■■□□□ 1.96
CSPG5-204ENST00000465441 JMYQ8N9B5 988 aa27.3■■□□□ 1.96
CSPG5-204ENST00000465441 AIMP1Q12904 312 aaKnown RBP27.29■■□□□ 1.96
CSPG5-204ENST00000465441 CC2D2BQ6DHV5 1058 aa27.29■■□□□ 1.96
CSPG5-204ENST00000465441 C3orf67Q6ZVT6 689 aa27.29■■□□□ 1.96
CSPG5-204ENST00000465441 RBM17Q96I25 401 aaKnown RBP27.29■■□□□ 1.96
CSPG5-204ENST00000465441 CHADLQ6NUI6 762 aa27.28■■□□□ 1.96
CSPG5-204ENST00000465441 XAGE3Q8WTP9 111 aa27.28■■□□□ 1.96
CSPG5-204ENST00000465441 L3MBTL3Q96JM7 780 aaPredicted RBP27.28■■□□□ 1.96
CSPG5-204ENST00000465441 NLRP3Q96P20 1036 aa27.28■■□□□ 1.96
CSPG5-204ENST00000465441 CRAMP1Q96RY5 1269 aa27.28■■□□□ 1.96
CSPG5-204ENST00000465441 PSMD1Q99460 953 aa27.28■■□□□ 1.96
CSPG5-204ENST00000465441 UTP14AQ9BVJ6 771 aaKnown RBP27.28■■□□□ 1.96
CSPG5-204ENST00000465441 RIC1Q4ADV7 1423 aa27.27■■□□□ 1.96
CSPG5-204ENST00000465441 ZNF541Q9H0D2 1346 aa27.27■■□□□ 1.96
CSPG5-204ENST00000465441 SLC10A5Q5PT55 438 aa27.27■■□□□ 1.96
CSPG5-204ENST00000465441 PRKRIP1Q9H875 184 aaPredicted RBP27.27■■□□□ 1.96
CSPG5-204ENST00000465441 IQCA1LA6NCM1 817 aa27.26■■□□□ 1.95
CSPG5-204ENST00000465441 FZD9O00144 591 aa27.26■■□□□ 1.95
CSPG5-204ENST00000465441 TAF1DQ9H5J8 278 aaPredicted RBP27.26■■□□□ 1.95
CSPG5-204ENST00000465441 DDX21Q9NR30 783 aaKnown RBP eCLIP27.26■■□□□ 1.95
CSPG5-204ENST00000465441 SNED1Q8TER0 1413 aa27.25■■□□□ 1.95
CSPG5-204ENST00000465441 TCERG1O14776 1098 aaKnown RBP27.25■■□□□ 1.95
CSPG5-204ENST00000465441 HSP90AB3PQ58FF7 597 aa27.24■■□□□ 1.95
CSPG5-204ENST00000465441 TCIRG1Q13488 830 aa27.23■■□□□ 1.95
CSPG5-204ENST00000465441 SLC51AQ86UW1 340 aa27.23■■□□□ 1.95
CSPG5-204ENST00000465441 PPEF1O14829 653 aaPredicted RBP27.22■■□□□ 1.95
CSPG5-204ENST00000465441 GRIPAP1Q4V328 841 aa27.22■■□□□ 1.95
CSPG5-204ENST00000465441 NLRP10Q86W26 655 aa27.22■■□□□ 1.95
CSPG5-204ENST00000465441 JDP2Q8WYK2 163 aa27.22■■□□□ 1.95
CSPG5-204ENST00000465441 CHPF2Q9P2E5 772 aa27.21■■□□□ 1.95
CSPG5-204ENST00000465441 HACL1Q9UJ83 578 aa27.21■■□□□ 1.95
CSPG5-204ENST00000465441 LDHDQ86WU2 507 aa27.2■■□□□ 1.94
CSPG5-204ENST00000465441 CFAP44Q96MT7 982 aa27.2■■□□□ 1.94
CSPG5-204ENST00000465441 HDGFL1Q5TGJ6 251 aa27.19■■□□□ 1.94
CSPG5-204ENST00000465441 SCN4AP35499 1836 aa27.18■■□□□ 1.94
CSPG5-204ENST00000465441 HCLS1P14317 486 aaPredicted RBP27.18■■□□□ 1.94
CSPG5-204ENST00000465441 EPHX2P34913 555 aa27.18■■□□□ 1.94
CSPG5-204ENST00000465441 EAPPQ56P03 285 aaPredicted RBP27.18■■□□□ 1.94
CSPG5-204ENST00000465441 GPC2Q8N158 579 aa27.18■■□□□ 1.94
CSPG5-204ENST00000465441 TRMT112Q9UI30 125 aaKnown RBP27.18■■□□□ 1.94
CSPG5-204ENST00000465441 RNF123Q5XPI4 1314 aa27.17■■□□□ 1.94
CSPG5-204ENST00000465441 HOXB7P09629 217 aa27.17■■□□□ 1.94
CSPG5-204ENST00000465441 EIF6P56537 245 aaKnown RBP27.17■■□□□ 1.94
CSPG5-204ENST00000465441 LARGE2Q8N3Y3 721 aa27.17■■□□□ 1.94
CSPG5-204ENST00000465441 CLEC11AQ9Y240 323 aa27.17■■□□□ 1.94
CSPG5-204ENST00000465441 ATP6V0A2Q9Y487 856 aa27.17■■□□□ 1.94
CSPG5-204ENST00000465441 ABCC4O15439 1325 aa27.16■■□□□ 1.94
CSPG5-204ENST00000465441 APAF1O14727 1248 aa27.16■■□□□ 1.94
CSPG5-204ENST00000465441 DUSP27Q5VZP5 1158 aa27.16■■□□□ 1.94
CSPG5-204ENST00000465441 ANKRD13DQ6ZTN6 518 aa27.16■■□□□ 1.94
CSPG5-204ENST00000465441 CREBZFQ9NS37 354 aa27.16■■□□□ 1.94
CSPG5-204ENST00000465441 DBF4Q9UBU7 674 aaPredicted RBP27.16■■□□□ 1.94
CSPG5-204ENST00000465441 PLBD2Q8NHP8 589 aa27.15■■□□□ 1.94
CSPG5-204ENST00000465441 ZNF428Q96B54 188 aa27.15■■□□□ 1.94
CSPG5-204ENST00000465441 TMX4Q9H1E5 349 aaPredicted RBP27.15■■□□□ 1.94
CSPG5-204ENST00000465441 MBIPQ9NS73 344 aa27.15■■□□□ 1.94
CSPG5-204ENST00000465441 GJA3Q9Y6H8 435 aa27.15■■□□□ 1.94
CSPG5-204ENST00000465441 BBOX1O75936 387 aa27.14■■□□□ 1.94
CSPG5-204ENST00000465441 ITGBL1O95965 494 aaPredicted RBP27.14■■□□□ 1.94
CSPG5-204ENST00000465441 ZNF853P0CG23 659 aa27.14■■□□□ 1.94
CSPG5-204ENST00000465441 COL4A5P29400 1685 aa27.14■■□□□ 1.93
CSPG5-204ENST00000465441 SH3TC1Q8TE82 1336 aa27.14■■□□□ 1.93
CSPG5-204ENST00000465441 PASKQ96RG2 1323 aa27.14■■□□□ 1.93
CSPG5-204ENST00000465441 PNMA8AQ86V59 439 aaPredicted RBP27.13■■□□□ 1.93
CSPG5-204ENST00000465441 SP8Q8IXZ3 490 aa27.12■■□□□ 1.93
CSPG5-204ENST00000465441 ISCA1Q9BUE6 129 aa27.12■■□□□ 1.93
CSPG5-204ENST00000465441 PPIP5K2O43314 1243 aa27.11■■□□□ 1.93
CSPG5-204ENST00000465441 DDX46Q7L014 1031 aaKnown RBP27.11■■□□□ 1.93
CSPG5-204ENST00000465441 HYPKQ9NX55 129 aa27.11■■□□□ 1.93
CSPG5-204ENST00000465441 ANKRD36CQ5JPF3 1778 aa27.1■■□□□ 1.93
CSPG5-204ENST00000465441 ATP5J2-PTCD1G3V325 749 aa27.1■■□□□ 1.93
CSPG5-204ENST00000465441 AOC3Q16853 763 aa27.1■■□□□ 1.93
CSPG5-204ENST00000465441 NIM1KQ8IY84 436 aa27.1■■□□□ 1.93
CSPG5-204ENST00000465441 VPS33BQ9H267 617 aa27.1■■□□□ 1.93
CSPG5-204ENST00000465441 MKRN1Q9UHC7 482 aaKnown RBP27.1■■□□□ 1.93
CSPG5-204ENST00000465441 COL13A1Q5TAT6 717 aaPredicted RBP27.09■■□□□ 1.93
CSPG5-204ENST00000465441 MAP1SQ66K74 1059 aaPredicted RBP27.09■■□□□ 1.93
CSPG5-204ENST00000465441 RTFDC1Q9BY42 306 aaPredicted RBP27.09■■□□□ 1.93
CSPG5-204ENST00000465441 IFT57Q9NWB7 429 aa27.09■■□□□ 1.93
CSPG5-204ENST00000465441 ELL2O00472 640 aaPredicted RBP27.08■■□□□ 1.93
CSPG5-204ENST00000465441 HSPA1AP0DMV8 641 aaKnown RBP27.08■■□□□ 1.93
CSPG5-204ENST00000465441 HSPA1BP0DMV9 641 aaKnown RBP27.08■■□□□ 1.93
CSPG5-204ENST00000465441 GNAI1P63096 354 aa27.08■■□□□ 1.93
CSPG5-204ENST00000465441 GRAPQ13588 217 aa27.08■■□□□ 1.93
CSPG5-204ENST00000465441 CNTROBQ8N137 903 aa27.08■■□□□ 1.93
CSPG5-204ENST00000465441 MPNDQ8N594 471 aa27.08■■□□□ 1.93
CSPG5-204ENST00000465441 SUPT20HQ8NEM7 779 aa27.08■■□□□ 1.93
CSPG5-204ENST00000465441 GRAPLQ8TC17 118 aaPredicted RBP27.08■■□□□ 1.93
CSPG5-204ENST00000465441 FAM89AQ96GI7 184 aa27.08■■□□□ 1.93
CSPG5-204ENST00000465441 EPS15P42566 896 aa27.07■■□□□ 1.92
CSPG5-204ENST00000465441 SCNN1DP51172 638 aa27.07■■□□□ 1.92
CSPG5-204ENST00000465441 DPP8Q6V1X1 898 aaPredicted RBP27.07■■□□□ 1.92
CSPG5-204ENST00000465441 LMOD1P29536 600 aaPredicted RBP27.06■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms