RNA–Protein interactions for RNA: ENST00000464976.1

RAPGEF4-206, Transcript of Rap guanine nucleotide exchange factor 4, humanhuman

TSL 1 (best)

Gene RAPGEF4, Length 980 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4-206ENST00000464976 CECR2Q9BXF3 1484 aa8.19□□□□□ -1.1
RAPGEF4-206ENST00000464976 OPLAHO14841 1288 aa8.19□□□□□ -1.1
RAPGEF4-206ENST00000464976 PDGFAP04085 211 aa8.19□□□□□ -1.1
RAPGEF4-206ENST00000464976 C8orf34Q49A92 452 aa8.19□□□□□ -1.1
RAPGEF4-206ENST00000464976 NUDT16Q96DE0 195 aaKnown RBP8.19□□□□□ -1.1
RAPGEF4-206ENST00000464976 ASB16Q96NS5 453 aa8.19□□□□□ -1.1
RAPGEF4-206ENST00000464976 ZCCHC2Q9C0B9 1178 aaKnown RBP8.19□□□□□ -1.1
RAPGEF4-206ENST00000464976 USP20Q9Y2K6 914 aa8.19□□□□□ -1.1
RAPGEF4-206ENST00000464976 WFS1O76024 890 aa8.18□□□□□ -1.1
RAPGEF4-206ENST00000464976 EPB42P16452 691 aa8.18□□□□□ -1.1
RAPGEF4-206ENST00000464976 ERCC3P19447 782 aa8.18□□□□□ -1.1
RAPGEF4-206ENST00000464976 INPP5BP32019 993 aa8.18□□□□□ -1.1
RAPGEF4-206ENST00000464976 USP5P45974 858 aa8.18□□□□□ -1.1
RAPGEF4-206ENST00000464976 TYRO3Q06418 890 aa8.18□□□□□ -1.1
RAPGEF4-206ENST00000464976 LBRQ14739 615 aaKnown RBP8.18□□□□□ -1.1
RAPGEF4-206ENST00000464976 FIGNL1Q6PIW4 674 aa8.18□□□□□ -1.1
RAPGEF4-206ENST00000464976 TMC7Q7Z402 723 aa8.18□□□□□ -1.1
RAPGEF4-206ENST00000464976 CMTR1Q8N1G2 835 aaKnown RBP8.18□□□□□ -1.1
RAPGEF4-206ENST00000464976 CITED4Q96RK1 184 aa8.18□□□□□ -1.1
RAPGEF4-206ENST00000464976 RBCK1Q9BYM8 510 aa8.18□□□□□ -1.1
RAPGEF4-206ENST00000464976 RTCBQ9Y3I0 505 aaKnown RBP8.18□□□□□ -1.1
RAPGEF4-206ENST00000464976 KHNYNO15037 678 aaKnown RBP8.17□□□□□ -1.1
RAPGEF4-206ENST00000464976 ATXN7O15265 892 aaPredicted RBP8.17□□□□□ -1.1
RAPGEF4-206ENST00000464976 ITGA6P23229 1130 aa8.17□□□□□ -1.1
RAPGEF4-206ENST00000464976 PDE3BQ13370 1112 aa8.17□□□□□ -1.1
RAPGEF4-206ENST00000464976 DBN1Q16643 649 aa8.17□□□□□ -1.1
RAPGEF4-206ENST00000464976 TRIM22Q8IYM9 498 aa8.17□□□□□ -1.1
RAPGEF4-206ENST00000464976 BRD7Q9NPI1 651 aa8.17□□□□□ -1.1
RAPGEF4-206ENST00000464976 CUEDC1Q9NWM3 386 aaPredicted RBP8.17□□□□□ -1.1
RAPGEF4-206ENST00000464976 DCDC2BA2VCK2 349 aa8.16□□□□□ -1.1
RAPGEF4-206ENST00000464976 SAMD5Q5TGI4 173 aa8.16□□□□□ -1.1
RAPGEF4-206ENST00000464976 PCDHGC4Q9Y5F7 938 aa8.16□□□□□ -1.1
RAPGEF4-206ENST00000464976 CDC14CA4D256 554 aa8.15□□□□□ -1.1
RAPGEF4-206ENST00000464976 RPLP1P05386 114 aaKnown RBP8.15□□□□□ -1.1
RAPGEF4-206ENST00000464976 GTPBP3Q969Y2 492 aaKnown RBP8.15□□□□□ -1.1
RAPGEF4-206ENST00000464976 DMRTB1Q96MA1 342 aa8.15□□□□□ -1.1
RAPGEF4-206ENST00000464976 FNDC3AQ9Y2H6 1198 aaKnown RBP8.15□□□□□ -1.1
RAPGEF4-206ENST00000464976 SMARCA4P51532 1647 aa8.14□□□□□ -1.11
RAPGEF4-206ENST00000464976 A6NHS1 94 aa8.14□□□□□ -1.11
RAPGEF4-206ENST00000464976 UBAP1LF5GYI3 381 aa8.14□□□□□ -1.11
RAPGEF4-206ENST00000464976 PPFIA3O75145 1194 aa8.14□□□□□ -1.11
RAPGEF4-206ENST00000464976 THBS1P07996 1170 aa8.14□□□□□ -1.11
RAPGEF4-206ENST00000464976 GJD3Q8N144 294 aa8.14□□□□□ -1.11
RAPGEF4-206ENST00000464976 ZNF837Q96EG3 531 aaPredicted RBP8.14□□□□□ -1.11
RAPGEF4-206ENST00000464976 GGNBP2Q9H3C7 697 aa8.14□□□□□ -1.11
RAPGEF4-206ENST00000464976 FAM157BP0CG42 384 aa8.13□□□□□ -1.11
RAPGEF4-206ENST00000464976 PLCB3Q01970 1234 aa8.13□□□□□ -1.11
RAPGEF4-206ENST00000464976 EHHADHQ08426 723 aa8.13□□□□□ -1.11
RAPGEF4-206ENST00000464976 FOXR1Q6PIV2 292 aa8.13□□□□□ -1.11
RAPGEF4-206ENST00000464976 NPAS4Q8IUM7 802 aa8.13□□□□□ -1.11
RAPGEF4-206ENST00000464976 VWA5B2Q8N398 1253 aa8.13□□□□□ -1.11
RAPGEF4-206ENST00000464976 ABHD17AQ96GS6 310 aa8.13□□□□□ -1.11
RAPGEF4-206ENST00000464976 GMCL1Q96IK5 515 aa8.13□□□□□ -1.11
RAPGEF4-206ENST00000464976 FAM129BQ96TA1 746 aa8.13□□□□□ -1.11
RAPGEF4-206ENST00000464976 BCL2L13Q9BXK5 485 aa8.13□□□□□ -1.11
RAPGEF4-206ENST00000464976 KCNH4Q9UQ05 1017 aa8.13□□□□□ -1.11
RAPGEF4-206ENST00000464976 TERTO14746 1132 aaKnown RBP8.12□□□□□ -1.11
RAPGEF4-206ENST00000464976 GPR182O15218 404 aa8.12□□□□□ -1.11
RAPGEF4-206ENST00000464976 BNIP3LO60238 219 aa8.12□□□□□ -1.11
RAPGEF4-206ENST00000464976 XYLBO75191 536 aa8.12□□□□□ -1.11
RAPGEF4-206ENST00000464976 MAPTP10636 758 aaKnown RBP8.12□□□□□ -1.11
RAPGEF4-206ENST00000464976 TNP2Q05952 138 aa8.12□□□□□ -1.11
RAPGEF4-206ENST00000464976 SFSWAPQ12872 951 aaKnown RBP8.12□□□□□ -1.11
RAPGEF4-206ENST00000464976 TRERF1Q96PN7 1200 aa8.12□□□□□ -1.11
RAPGEF4-206ENST00000464976 NIF3L1Q9GZT8 377 aa8.12□□□□□ -1.11
RAPGEF4-206ENST00000464976 TREHO43280 583 aa8.11□□□□□ -1.11
RAPGEF4-206ENST00000464976 MAPK8P45983 427 aa8.11□□□□□ -1.11
RAPGEF4-206ENST00000464976 UBAP2LQ14157 1087 aaKnown RBP8.11□□□□□ -1.11
RAPGEF4-206ENST00000464976 TRIP4Q15650 581 aaPredicted RBP8.11□□□□□ -1.11
RAPGEF4-206ENST00000464976 ZNF438Q7Z4V0 828 aa8.11□□□□□ -1.11
RAPGEF4-206ENST00000464976 PHF24Q9UPV7 400 aa8.11□□□□□ -1.11
RAPGEF4-206ENST00000464976 AMOTL2Q9Y2J4 779 aa8.11□□□□□ -1.11
RAPGEF4-206ENST00000464976 KCNMB2Q9Y691 235 aa8.11□□□□□ -1.11
RAPGEF4-206ENST00000464976 MROH2BQ7Z745 1585 aa8.1□□□□□ -1.11
RAPGEF4-206ENST00000464976 GPR25O00155 361 aa8.1□□□□□ -1.11
RAPGEF4-206ENST00000464976 EFSO43281 561 aa8.1□□□□□ -1.11
RAPGEF4-206ENST00000464976 WIPF1O43516 503 aa8.1□□□□□ -1.11
RAPGEF4-206ENST00000464976 CD33P20138 364 aa8.1□□□□□ -1.11
RAPGEF4-206ENST00000464976 GRNP28799 593 aaKnown RBP8.1□□□□□ -1.11
RAPGEF4-206ENST00000464976 RBM25P49756 843 aaKnown RBP8.1□□□□□ -1.11
RAPGEF4-206ENST00000464976 VEGFBP49765 207 aa8.1□□□□□ -1.11
RAPGEF4-206ENST00000464976 EAPPQ56P03 285 aaPredicted RBP8.1□□□□□ -1.11
RAPGEF4-206ENST00000464976 SV2AQ7L0J3 742 aa8.1□□□□□ -1.11
RAPGEF4-206ENST00000464976 KRT25Q7Z3Z0 450 aa8.1□□□□□ -1.11
RAPGEF4-206ENST00000464976 NPM2Q86SE8 214 aaKnown RBP8.1□□□□□ -1.11
RAPGEF4-206ENST00000464976 GIPC2Q8TF65 315 aa8.1□□□□□ -1.11
RAPGEF4-206ENST00000464976 STRN4Q9NRL3 753 aa8.1□□□□□ -1.11
RAPGEF4-206ENST00000464976 MARK1Q9P0L2 795 aa8.1□□□□□ -1.11
RAPGEF4-206ENST00000464976 BAZ1AQ9NRL2 1556 aaPredicted RBP8.1□□□□□ -1.11
RAPGEF4-206ENST00000464976 P4HBP07237 508 aaKnown RBP8.09□□□□□ -1.11
RAPGEF4-206ENST00000464976 KCNQ4P56696 695 aa8.09□□□□□ -1.11
RAPGEF4-206ENST00000464976 LAMC2Q13753 1193 aa8.09□□□□□ -1.11
RAPGEF4-206ENST00000464976 ZNF428Q96B54 188 aa8.09□□□□□ -1.11
RAPGEF4-206ENST00000464976 PNMA5Q96PV4 448 aa8.09□□□□□ -1.11
RAPGEF4-206ENST00000464976 ELP3Q9H9T3 547 aa8.09□□□□□ -1.11
RAPGEF4-206ENST00000464976 ATXN7L1Q9ULK2 861 aaPredicted RBP8.09□□□□□ -1.11
RAPGEF4-206ENST00000464976 ATAD2BQ9ULI0 1458 aa8.08□□□□□ -1.12
RAPGEF4-206ENST00000464976 SASH3O75995 380 aa8.08□□□□□ -1.12
RAPGEF4-206ENST00000464976 IGHA2P01877 340 aa8.08□□□□□ -1.12
RAPGEF4-206ENST00000464976 NEFLP07196 543 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms