RNA–Protein interactions for RNA: ENST00000464833.1

CHRD-211, Transcript of chordin, humanhuman

TSL 5

Gene CHRD, Length 1,340 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-211ENST00000464833 RNF123Q5XPI4 1314 aa35.25■■■■□ 3.23
CHRD-211ENST00000464833 ERFEQ4G0M1 354 aa35.25■■■■□ 3.23
CHRD-211ENST00000464833 COL11A2P13942 1736 aaPredicted RBP35.24■■■■□ 3.23
CHRD-211ENST00000464833 RIC1Q4ADV7 1423 aa35.24■■■■□ 3.23
CHRD-211ENST00000464833 TNRC6CQ9HCJ0 1690 aaKnown RBP35.24■■■■□ 3.23
CHRD-211ENST00000464833 KCNA3P22001 575 aa35.24■■■■□ 3.23
CHRD-211ENST00000464833 GTF2E1P29083 439 aaPredicted RBP35.24■■■■□ 3.23
CHRD-211ENST00000464833 DNAAF4Q8WXU2 420 aa35.24■■■■□ 3.23
CHRD-211ENST00000464833 CHRNA5P30532 468 aa35.23■■■■□ 3.23
CHRD-211ENST00000464833 PDE6BP35913 854 aa35.23■■■■□ 3.23
CHRD-211ENST00000464833 IGKV5-2P06315 115 aa35.22■■■■□ 3.23
CHRD-211ENST00000464833 BRPF1P55201 1214 aaPredicted RBP35.22■■■■□ 3.23
CHRD-211ENST00000464833 NEXNQ0ZGT2 675 aa35.21■■■■□ 3.23
CHRD-211ENST00000464833 CCDC191Q8NCU4 936 aa35.21■■■■□ 3.23
CHRD-211ENST00000464833 TRMT112Q9UI30 125 aaKnown RBP35.21■■■■□ 3.23
CHRD-211ENST00000464833 PTPRCP08575 1304 aa35.2■■■■□ 3.23
CHRD-211ENST00000464833 KLRG2A4D1S0 409 aaPredicted RBP35.2■■■■□ 3.23
CHRD-211ENST00000464833 F6X3S4 739 aa35.2■■■■□ 3.23
CHRD-211ENST00000464833 PDZRN3Q9UPQ7 1066 aa35.2■■■■□ 3.23
CHRD-211ENST00000464833 C2CD5Q86YS7 1000 aa35.19■■■■□ 3.22
CHRD-211ENST00000464833 SH3TC1Q8TE82 1336 aa35.19■■■■□ 3.22
CHRD-211ENST00000464833 SLC10A5Q5PT55 438 aa35.18■■■■□ 3.22
CHRD-211ENST00000464833 CWC25Q9NXE8 425 aaPredicted RBP35.18■■■■□ 3.22
CHRD-211ENST00000464833 H0YIN7 160 aa35.17■■■■□ 3.22
CHRD-211ENST00000464833 SYNE4Q8N205 404 aa35.17■■■■□ 3.22
CHRD-211ENST00000464833 NEURL1BA8MQ27 555 aa35.16■■■■□ 3.22
CHRD-211ENST00000464833 CWF19L2Q2TBE0 894 aaKnown RBP35.16■■■■□ 3.22
CHRD-211ENST00000464833 YTHDC1Q96MU7 727 aaKnown RBP35.16■■■■□ 3.22
CHRD-211ENST00000464833 GOLGB1Q14789 3259 aaKnown RBP35.16■■■■□ 3.22
CHRD-211ENST00000464833 DDX60Q8IY21 1712 aaKnown RBP35.16■■■■□ 3.22
CHRD-211ENST00000464833 LINS1Q8NG48 757 aa35.15■■■■□ 3.22
CHRD-211ENST00000464833 SRGNP10124 158 aa35.14■■■■□ 3.22
CHRD-211ENST00000464833 BEND3Q5T5X7 828 aa35.14■■■■□ 3.22
CHRD-211ENST00000464833 ZBTB38Q8NAP3 1195 aaPredicted RBP35.14■■■■□ 3.22
CHRD-211ENST00000464833 FAM89AQ96GI7 184 aa35.14■■■■□ 3.22
CHRD-211ENST00000464833 PIM2Q9P1W9 311 aa35.14■■■■□ 3.22
CHRD-211ENST00000464833 LAMB2P55268 1798 aa35.14■■■■□ 3.22
CHRD-211ENST00000464833 WWC3Q9ULE0 1092 aa35.13■■■■□ 3.21
CHRD-211ENST00000464833 PCCAP05165 728 aaPredicted RBP35.12■■■■□ 3.21
CHRD-211ENST00000464833 YBX3P16989 372 aaKnown RBP eCLIP35.12■■■■□ 3.21
CHRD-211ENST00000464833 CRY2Q49AN0 593 aa35.12■■■■□ 3.21
CHRD-211ENST00000464833 C3orf67Q6ZVT6 689 aa35.11■■■■□ 3.21
CHRD-211ENST00000464833 NOB1Q9ULX3 412 aaKnown RBP35.11■■■■□ 3.21
CHRD-211ENST00000464833 ARFGEF1Q9Y6D6 1849 aa35.11■■■■□ 3.21
CHRD-211ENST00000464833 BCAR3O75815 825 aa35.1■■■■□ 3.21
CHRD-211ENST00000464833 HCLS1P14317 486 aaPredicted RBP35.1■■■■□ 3.21
CHRD-211ENST00000464833 KIF16BQ96L93 1317 aa35.1■■■■□ 3.21
CHRD-211ENST00000464833 GCKRQ14397 625 aa35.09■■■■□ 3.21
CHRD-211ENST00000464833 GPR162Q16538 588 aa35.09■■■■□ 3.21
CHRD-211ENST00000464833 STYK1Q6J9G0 422 aa35.09■■■■□ 3.21
CHRD-211ENST00000464833 PELP1Q8IZL8 1130 aaKnown RBP35.09■■■■□ 3.21
CHRD-211ENST00000464833 MASTLQ96GX5 879 aa35.09■■■■□ 3.21
CHRD-211ENST00000464833 RTL5Q5HYW3 569 aaPredicted RBP35.08■■■■□ 3.21
CHRD-211ENST00000464833 SLC4A10Q6U841 1118 aa35.08■■■■□ 3.21
CHRD-211ENST00000464833 NPR1P16066 1061 aa35.07■■■■□ 3.21
CHRD-211ENST00000464833 DALRD3Q5D0E6 543 aaKnown RBP35.07■■■■□ 3.21
CHRD-211ENST00000464833 NLRP3Q96P20 1036 aa35.07■■■■□ 3.21
CHRD-211ENST00000464833 IRS4O14654 1257 aaPredicted RBP35.06■■■■□ 3.2
CHRD-211ENST00000464833 ZNF622Q969S3 477 aaKnown RBP eCLIP35.06■■■■□ 3.2
CHRD-211ENST00000464833 BCS1LQ9Y276 419 aa35.06■■■■□ 3.2
CHRD-211ENST00000464833 CACNA1SQ13698 1873 aa35.06■■■■□ 3.2
CHRD-211ENST00000464833 CDHR2Q9BYE9 1310 aa35.06■■■■□ 3.2
CHRD-211ENST00000464833 DCAF8L1A6NGE4 600 aa35.06■■■■□ 3.2
CHRD-211ENST00000464833 TTLL6Q8N841 843 aa35.06■■■■□ 3.2
CHRD-211ENST00000464833 ARHGAP45Q92619 1136 aa35.06■■■■□ 3.2
CHRD-211ENST00000464833 JARID2Q92833 1246 aaPredicted RBP35.06■■■■□ 3.2
CHRD-211ENST00000464833 H7C1W4 665 aa35.05■■■■□ 3.2
CHRD-211ENST00000464833 ALDH1L1O75891 902 aa35.05■■■■□ 3.2
CHRD-211ENST00000464833 SLX4Q8IY92 1834 aa35.04■■■■□ 3.2
CHRD-211ENST00000464833 API5Q9BZZ5 524 aaKnown RBP35.04■■■■□ 3.2
CHRD-211ENST00000464833 SRCIN1Q9C0H9 1055 aa35.04■■■■□ 3.2
CHRD-211ENST00000464833 HOXA10P31260 410 aaPredicted RBP35.03■■■■□ 3.2
CHRD-211ENST00000464833 CNKSR1Q969H4 720 aa35.03■■■■□ 3.2
CHRD-211ENST00000464833 CASP7P55210 303 aa35.02■■■■□ 3.2
CHRD-211ENST00000464833 UBE3BQ7Z3V4 1068 aa35.02■■■■□ 3.2
CHRD-211ENST00000464833 HSP90B1P14625 803 aaKnown RBP35.01■■■■□ 3.19
CHRD-211ENST00000464833 RPGRQ92834 1020 aaKnown RBP35.01■■■■□ 3.19
CHRD-211ENST00000464833 MYH3P11055 1940 aa35■■■■□ 3.19
CHRD-211ENST00000464833 IPO8O15397 1037 aaKnown RBP34.99■■■■□ 3.19
CHRD-211ENST00000464833 GRIN3BO60391 1043 aa34.99■■■■□ 3.19
CHRD-211ENST00000464833 SF3B3Q15393 1217 aaKnown RBP34.99■■■■□ 3.19
CHRD-211ENST00000464833 PRPF40BQ6NWY9 871 aaKnown RBP34.99■■■■□ 3.19
CHRD-211ENST00000464833 UTRNP46939 3433 aa34.98■■■■□ 3.19
CHRD-211ENST00000464833 PDE8AO60658 829 aa34.97■■■■□ 3.19
CHRD-211ENST00000464833 ALDH1B1P30837 517 aa34.97■■■■□ 3.19
CHRD-211ENST00000464833 FRAT1Q92837 279 aaPredicted RBP34.97■■■■□ 3.19
CHRD-211ENST00000464833 RBM17Q96I25 401 aaKnown RBP34.97■■■■□ 3.19
CHRD-211ENST00000464833 CRAMP1Q96RY5 1269 aa34.97■■■■□ 3.19
CHRD-211ENST00000464833 GRM8O00222 908 aa34.96■■■■□ 3.19
CHRD-211ENST00000464833 TRIM27P14373 513 aa34.96■■■■□ 3.19
CHRD-211ENST00000464833 ATF7IPQ6VMQ6 1270 aa34.96■■■■□ 3.19
CHRD-211ENST00000464833 ABCC4O15439 1325 aa34.95■■■■□ 3.19
CHRD-211ENST00000464833 RCAN3Q9UKA8 241 aa34.95■■■■□ 3.19
CHRD-211ENST00000464833 TAF1P21675 1872 aa34.94■■■■□ 3.18
CHRD-211ENST00000464833 PLA2G12BQ9BX93 195 aa34.94■■■■□ 3.18
CHRD-211ENST00000464833 CCT4P50991 539 aaKnown RBP34.93■■■■□ 3.18
CHRD-211ENST00000464833 ZKSCAN2Q63HK3 967 aa34.93■■■■□ 3.18
CHRD-211ENST00000464833 TNNQ9UQP3 1299 aa34.93■■■■□ 3.18
CHRD-211ENST00000464833 UTYO14607 1347 aa34.93■■■■□ 3.18
CHRD-211ENST00000464833 C7orf43Q8WVR3 580 aa34.92■■■■□ 3.18
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms