RNA–Protein interactions for RNA: ENST00000464646.1

RPP40-203, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 5 BASIC

Gene RPP40, Length 1,042 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-203ENST00000464646 JDP2Q8WYK2 163 aa18.02■□□□□ 0.48
RPP40-203ENST00000464646 KLRG1Q96E93 195 aa18.02■□□□□ 0.48
RPP40-203ENST00000464646 NLRP3Q96P20 1036 aa18.02■□□□□ 0.48
RPP40-203ENST00000464646 UTP14AQ9BVJ6 771 aaKnown RBP18.02■□□□□ 0.48
RPP40-203ENST00000464646 CLEC11AQ9Y240 323 aa18.02■□□□□ 0.48
RPP40-203ENST00000464646 POTECB2RU33 542 aa18.01■□□□□ 0.47
RPP40-203ENST00000464646 IARSP41252 1262 aaKnown RBP18.01■□□□□ 0.47
RPP40-203ENST00000464646 DNAJC5GQ8N7S2 189 aa18.01■□□□□ 0.47
RPP40-203ENST00000464646 IQCA1LA6NCM1 817 aa18■□□□□ 0.47
RPP40-203ENST00000464646 PPEF1O14829 653 aaPredicted RBP18■□□□□ 0.47
RPP40-203ENST00000464646 NTSR2O95665 410 aa18■□□□□ 0.47
RPP40-203ENST00000464646 PDIA6Q15084 440 aa18■□□□□ 0.47
RPP40-203ENST00000464646 HSP90AB3PQ58FF7 597 aa18■□□□□ 0.47
RPP40-203ENST00000464646 HDGFL1Q5TGJ6 251 aa18■□□□□ 0.47
RPP40-203ENST00000464646 EIF6P56537 245 aaKnown RBP17.99■□□□□ 0.47
RPP40-203ENST00000464646 CHADLQ6NUI6 762 aa17.99■□□□□ 0.47
RPP40-203ENST00000464646 PRKRIP1Q9H875 184 aaPredicted RBP17.99■□□□□ 0.47
RPP40-203ENST00000464646 TRIM35Q9UPQ4 493 aa17.99■□□□□ 0.47
RPP40-203ENST00000464646 GJA3Q9Y6H8 435 aa17.99■□□□□ 0.47
RPP40-203ENST00000464646 ZNF541Q9H0D2 1346 aa17.98■□□□□ 0.47
RPP40-203ENST00000464646 CHL1O00533 1208 aa17.98■□□□□ 0.47
RPP40-203ENST00000464646 CRY2Q49AN0 593 aa17.98■□□□□ 0.47
RPP40-203ENST00000464646 CC2D2BQ6DHV5 1058 aa17.98■□□□□ 0.47
RPP40-203ENST00000464646 LARGE2Q8N3Y3 721 aa17.98■□□□□ 0.47
RPP40-203ENST00000464646 CHPF2Q9P2E5 772 aa17.98■□□□□ 0.47
RPP40-203ENST00000464646 TRMT112Q9UI30 125 aaKnown RBP17.98■□□□□ 0.47
RPP40-203ENST00000464646 IBTKQ9P2D0 1353 aaPredicted RBP17.97■□□□□ 0.47
RPP40-203ENST00000464646 POTEIP0CG38 1075 aa17.97■□□□□ 0.47
RPP40-203ENST00000464646 POTEJP0CG39 1038 aa17.97■□□□□ 0.47
RPP40-203ENST00000464646 DDX21Q9NR30 783 aaKnown RBP eCLIP17.97■□□□□ 0.47
RPP40-203ENST00000464646 HACL1Q9UJ83 578 aa17.97■□□□□ 0.47
RPP40-203ENST00000464646 HCLS1P14317 486 aaPredicted RBP17.96■□□□□ 0.47
RPP40-203ENST00000464646 C3orf67Q6ZVT6 689 aa17.96■□□□□ 0.47
RPP40-203ENST00000464646 CRAMP1Q96RY5 1269 aa17.96■□□□□ 0.47
RPP40-203ENST00000464646 RNF123Q5XPI4 1314 aa17.96■□□□□ 0.46
RPP40-203ENST00000464646 ELL2O00472 640 aaPredicted RBP17.95■□□□□ 0.46
RPP40-203ENST00000464646 APAF1O14727 1248 aa17.95■□□□□ 0.46
RPP40-203ENST00000464646 IFFO2Q5TF58 517 aa17.95■□□□□ 0.46
RPP40-203ENST00000464646 DUSP27Q5VZP5 1158 aa17.95■□□□□ 0.46
RPP40-203ENST00000464646 PSMD1Q99460 953 aa17.95■□□□□ 0.46
RPP40-203ENST00000464646 TAF1DQ9H5J8 278 aaPredicted RBP17.95■□□□□ 0.46
RPP40-203ENST00000464646 PPIP5K2O43314 1243 aa17.94■□□□□ 0.46
RPP40-203ENST00000464646 LMOD1P29536 600 aaPredicted RBP17.94■□□□□ 0.46
RPP40-203ENST00000464646 HOXA10P31260 410 aaPredicted RBP17.94■□□□□ 0.46
RPP40-203ENST00000464646 EPHX2P34913 555 aa17.94■□□□□ 0.46
RPP40-203ENST00000464646 TCIRG1Q13488 830 aa17.94■□□□□ 0.46
RPP40-203ENST00000464646 DDX46Q7L014 1031 aaKnown RBP17.94■□□□□ 0.46
RPP40-203ENST00000464646 LRP10Q7Z4F1 713 aa17.94■□□□□ 0.46
RPP40-203ENST00000464646 NLRP10Q86W26 655 aa17.94■□□□□ 0.46
RPP40-203ENST00000464646 NIM1KQ8IY84 436 aa17.94■□□□□ 0.46
RPP40-203ENST00000464646 ANKRD36CQ5JPF3 1778 aa17.94■□□□□ 0.46
RPP40-203ENST00000464646 SCN4AP35499 1836 aa17.93■□□□□ 0.46
RPP40-203ENST00000464646 GRIPAP1Q4V328 841 aa17.93■□□□□ 0.46
RPP40-203ENST00000464646 RTL5Q5HYW3 569 aaPredicted RBP17.93■□□□□ 0.46
RPP40-203ENST00000464646 ANKRD13DQ6ZTN6 518 aa17.93■□□□□ 0.46
RPP40-203ENST00000464646 SLC51AQ86UW1 340 aa17.93■□□□□ 0.46
RPP40-203ENST00000464646 LDHDQ86WU2 507 aa17.93■□□□□ 0.46
RPP40-203ENST00000464646 CFAP44Q96MT7 982 aa17.93■□□□□ 0.46
RPP40-203ENST00000464646 MBIPQ9NS73 344 aa17.93■□□□□ 0.46
RPP40-203ENST00000464646 DBF4Q9UBU7 674 aaPredicted RBP17.93■□□□□ 0.46
RPP40-203ENST00000464646 MKRN1Q9UHC7 482 aaKnown RBP17.93■□□□□ 0.46
RPP40-203ENST00000464646 SH3TC1Q8TE82 1336 aa17.93■□□□□ 0.46
RPP40-203ENST00000464646 ATP5J2-PTCD1G3V325 749 aa17.92■□□□□ 0.46
RPP40-203ENST00000464646 CALD1Q05682 793 aaKnown RBP17.92■□□□□ 0.46
RPP40-203ENST00000464646 L3MBTL3Q96JM7 780 aaPredicted RBP17.92■□□□□ 0.46
RPP40-203ENST00000464646 ABCC4O15439 1325 aa17.92■□□□□ 0.46
RPP40-203ENST00000464646 RIC1Q4ADV7 1423 aa17.91■□□□□ 0.46
RPP40-203ENST00000464646 FZD9O00144 591 aa17.91■□□□□ 0.46
RPP40-203ENST00000464646 GNAI1P63096 354 aa17.91■□□□□ 0.46
RPP40-203ENST00000464646 AOC3Q16853 763 aa17.91■□□□□ 0.46
RPP40-203ENST00000464646 SLC10A5Q5PT55 438 aa17.91■□□□□ 0.46
RPP40-203ENST00000464646 DPP8Q6V1X1 898 aaPredicted RBP17.91■□□□□ 0.46
RPP40-203ENST00000464646 RIC3Q7Z5B4 369 aa17.91■□□□□ 0.46
RPP40-203ENST00000464646 GPC2Q8N158 579 aa17.91■□□□□ 0.46
RPP40-203ENST00000464646 PLBD2Q8NHP8 589 aa17.91■□□□□ 0.46
RPP40-203ENST00000464646 HYPKQ9NX55 129 aa17.91■□□□□ 0.46
RPP40-203ENST00000464646 CEP350Q5VT06 3117 aa17.91■□□□□ 0.46
RPP40-203ENST00000464646 HOXB7P09629 217 aa17.9■□□□□ 0.46
RPP40-203ENST00000464646 GOLGA2Q08379 1002 aa17.9■□□□□ 0.46
RPP40-203ENST00000464646 MPNDQ8N594 471 aa17.9■□□□□ 0.46
RPP40-203ENST00000464646 SUPT20HQ8NEM7 779 aa17.9■□□□□ 0.46
RPP40-203ENST00000464646 ATP6V0A2Q9Y487 856 aa17.9■□□□□ 0.46
RPP40-203ENST00000464646 PNMA8AQ86V59 439 aaPredicted RBP17.89■□□□□ 0.45
RPP40-203ENST00000464646 FAM89AQ96GI7 184 aa17.89■□□□□ 0.45
RPP40-203ENST00000464646 BBOX1O75936 387 aa17.88■□□□□ 0.45
RPP40-203ENST00000464646 MAP1SQ66K74 1059 aaPredicted RBP17.88■□□□□ 0.45
RPP40-203ENST00000464646 JMYQ8N9B5 988 aa17.88■□□□□ 0.45
RPP40-203ENST00000464646 CREBZFQ9NS37 354 aa17.88■□□□□ 0.45
RPP40-203ENST00000464646 IFT57Q9NWB7 429 aa17.88■□□□□ 0.45
RPP40-203ENST00000464646 LAMB2P55268 1798 aa17.88■□□□□ 0.45
RPP40-203ENST00000464646 GRAPQ13588 217 aa17.87■□□□□ 0.45
RPP40-203ENST00000464646 SP8Q8IXZ3 490 aa17.87■□□□□ 0.45
RPP40-203ENST00000464646 GRAPLQ8TC17 118 aaPredicted RBP17.87■□□□□ 0.45
RPP40-203ENST00000464646 TAF1P21675 1872 aa17.86■□□□□ 0.45
RPP40-203ENST00000464646 HSPA1AP0DMV8 641 aaKnown RBP17.86■□□□□ 0.45
RPP40-203ENST00000464646 HSPA1BP0DMV9 641 aaKnown RBP17.86■□□□□ 0.45
RPP40-203ENST00000464646 CNTROBQ8N137 903 aa17.86■□□□□ 0.45
RPP40-203ENST00000464646 MYD88Q99836 296 aa17.86■□□□□ 0.45
RPP40-203ENST00000464646 PHAXQ9H814 394 aaKnown RBP17.86■□□□□ 0.45
RPP40-203ENST00000464646 TMEM88BA6NKF7 163 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms