RNA–Protein interactions for RNA: ENST00000464313.1

PTPN12-210, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 4

Gene PTPN12, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-210ENST00000464313 TEAD4Q15561 434 aa7.86□□□□□ -1.15
PTPN12-210ENST00000464313 NFATC2IPQ8NCF5 419 aa7.86□□□□□ -1.15
PTPN12-210ENST00000464313 C7orf43Q8WVR3 580 aa7.86□□□□□ -1.15
PTPN12-210ENST00000464313 NEUROD4Q9HD90 331 aa7.86□□□□□ -1.15
PTPN12-210ENST00000464313 ZNF232Q9UNY5 417 aa7.86□□□□□ -1.15
PTPN12-210ENST00000464313 ELNP15502 786 aa7.85□□□□□ -1.15
PTPN12-210ENST00000464313 PSME1Q06323 249 aa7.85□□□□□ -1.15
PTPN12-210ENST00000464313 FZD5Q13467 585 aa7.85□□□□□ -1.15
PTPN12-210ENST00000464313 EML3Q32P44 896 aa7.85□□□□□ -1.15
PTPN12-210ENST00000464313 SLC9A9Q8IVB4 645 aa7.85□□□□□ -1.15
PTPN12-210ENST00000464313 TNS4Q8IZW8 715 aa7.85□□□□□ -1.15
PTPN12-210ENST00000464313 TNFRSF25Q93038 417 aa7.85□□□□□ -1.15
PTPN12-210ENST00000464313 NID1P14543 1247 aa7.84□□□□□ -1.15
PTPN12-210ENST00000464313 ADH7P40394 386 aa7.84□□□□□ -1.15
PTPN12-210ENST00000464313 EPHA4P54764 986 aa7.84□□□□□ -1.15
PTPN12-210ENST00000464313 SPEM2Q0P670 501 aa7.84□□□□□ -1.15
PTPN12-210ENST00000464313 PRDM6Q9NQX0 595 aa7.84□□□□□ -1.15
PTPN12-210ENST00000464313 NOD1Q9Y239 953 aa7.84□□□□□ -1.15
PTPN12-210ENST00000464313 SRPK2P78362 688 aaKnown RBP7.83□□□□□ -1.16
PTPN12-210ENST00000464313 PLEKHM2Q8IWE5 1019 aa7.83□□□□□ -1.16
PTPN12-210ENST00000464313 PBXIP1Q96AQ6 731 aa7.83□□□□□ -1.16
PTPN12-210ENST00000464313 KANK4Q5T7N3 995 aaPredicted RBP7.82□□□□□ -1.16
PTPN12-210ENST00000464313 RHPN1Q8TCX5 695 aa7.82□□□□□ -1.16
PTPN12-210ENST00000464313 HSH2DQ96JZ2 352 aa7.82□□□□□ -1.16
PTPN12-210ENST00000464313 KRTAP4-2Q9BYR5 136 aa7.82□□□□□ -1.16
PTPN12-210ENST00000464313 SERTM1A2A2V5 107 aa7.81□□□□□ -1.16
PTPN12-210ENST00000464313 TRAPPC3LQ5T215 181 aa7.81□□□□□ -1.16
PTPN12-210ENST00000464313 C20orf204Q6ZNR8 217 aa7.81□□□□□ -1.16
PTPN12-210ENST00000464313 MKRN1Q9UHC7 482 aaKnown RBP7.81□□□□□ -1.16
PTPN12-210ENST00000464313 C9orf172C9J069 976 aa7.8□□□□□ -1.16
PTPN12-210ENST00000464313 CEP63Q96MT8 703 aa7.8□□□□□ -1.16
PTPN12-210ENST00000464313 VRTNQ9H8Y1 702 aa7.8□□□□□ -1.16
PTPN12-210ENST00000464313 BRD7Q9NPI1 651 aa7.8□□□□□ -1.16
PTPN12-210ENST00000464313 RNF112Q9ULX5 631 aa7.8□□□□□ -1.16
PTPN12-210ENST00000464313 HCN4Q9Y3Q4 1203 aa7.8□□□□□ -1.16
PTPN12-210ENST00000464313 SELPP16109 830 aa7.79□□□□□ -1.16
PTPN12-210ENST00000464313 CLDN10P78369 228 aa7.79□□□□□ -1.16
PTPN12-210ENST00000464313 TBC1D8BQ0IIM8 1120 aa7.79□□□□□ -1.16
PTPN12-210ENST00000464313 ADGRE1Q14246 886 aa7.79□□□□□ -1.16
PTPN12-210ENST00000464313 CRTC2Q53ET0 693 aaPredicted RBP7.79□□□□□ -1.16
PTPN12-210ENST00000464313 KIAA1024Q9UPX6 916 aa7.79□□□□□ -1.16
PTPN12-210ENST00000464313 GPC6Q9Y625 555 aaPredicted RBP7.79□□□□□ -1.16
PTPN12-210ENST00000464313 SFI1A8K8P3 1242 aa7.78□□□□□ -1.16
PTPN12-210ENST00000464313 NEUROD1Q13562 356 aa7.78□□□□□ -1.16
PTPN12-210ENST00000464313 MBTPS1Q14703 1052 aa7.78□□□□□ -1.16
PTPN12-210ENST00000464313 ZNF280CQ8ND82 737 aa7.78□□□□□ -1.16
PTPN12-210ENST00000464313 BHMTQ93088 406 aa7.78□□□□□ -1.16
PTPN12-210ENST00000464313 A0A0A0MRY4 1105 aa7.77□□□□□ -1.17
PTPN12-210ENST00000464313 USP17L15C9J2P7 530 aa7.77□□□□□ -1.17
PTPN12-210ENST00000464313 USP17L10C9JJH3 530 aa7.77□□□□□ -1.17
PTPN12-210ENST00000464313 USP17L13C9JLJ4 530 aa7.77□□□□□ -1.17
PTPN12-210ENST00000464313 USP17L12C9JPN9 530 aa7.77□□□□□ -1.17
PTPN12-210ENST00000464313 USP17L11C9JVI0 530 aa7.77□□□□□ -1.17
PTPN12-210ENST00000464313 USP17L21D6R901 530 aa7.77□□□□□ -1.17
PTPN12-210ENST00000464313 USP17L18D6R9N7 530 aa7.77□□□□□ -1.17
PTPN12-210ENST00000464313 USP17L22D6RA61 530 aa7.77□□□□□ -1.17
PTPN12-210ENST00000464313 USP17L17D6RBQ6 530 aa7.77□□□□□ -1.17
PTPN12-210ENST00000464313 USP17L19D6RCP7 530 aa7.77□□□□□ -1.17
PTPN12-210ENST00000464313 USP17L20D6RJB6 530 aa7.77□□□□□ -1.17
PTPN12-210ENST00000464313 LZTS3O60299 673 aaPredicted RBP7.77□□□□□ -1.17
PTPN12-210ENST00000464313 PPP1R15AO75807 674 aaPredicted RBP7.77□□□□□ -1.17
PTPN12-210ENST00000464313 RASA1P20936 1047 aa7.77□□□□□ -1.17
PTPN12-210ENST00000464313 USP17L24Q0WX57 530 aa7.77□□□□□ -1.17
PTPN12-210ENST00000464313 SHISA2Q6UWI4 295 aa7.77□□□□□ -1.17
PTPN12-210ENST00000464313 HOMEZQ8IX15 550 aa7.77□□□□□ -1.17
PTPN12-210ENST00000464313 OGFOD1Q8N543 542 aa7.77□□□□□ -1.17
PTPN12-210ENST00000464313 RETREG2Q8NC44 543 aa7.77□□□□□ -1.17
PTPN12-210ENST00000464313 TP53INP1Q96A56 240 aa7.77□□□□□ -1.17
PTPN12-210ENST00000464313 ZNF594Q96JF6 807 aaPredicted RBP7.77□□□□□ -1.17
PTPN12-210ENST00000464313 ARXQ96QS3 562 aa7.77□□□□□ -1.17
PTPN12-210ENST00000464313 PHACTR1Q9C0D0 580 aa7.77□□□□□ -1.17
PTPN12-210ENST00000464313 TSPAN10Q9H1Z9 355 aaPredicted RBP7.77□□□□□ -1.17
PTPN12-210ENST00000464313 KCNH4Q9UQ05 1017 aa7.77□□□□□ -1.17
PTPN12-210ENST00000464313 CARNS1A5YM72 827 aa7.76□□□□□ -1.17
PTPN12-210ENST00000464313 LILRB5O75023 590 aa7.76□□□□□ -1.17
PTPN12-210ENST00000464313 TYRO3Q06418 890 aa7.76□□□□□ -1.17
PTPN12-210ENST00000464313 TXNRD3Q86VQ6 643 aa7.76□□□□□ -1.17
PTPN12-210ENST00000464313 TPCN2Q8NHX9 752 aa7.76□□□□□ -1.17
PTPN12-210ENST00000464313 NUDT8Q8WV74 236 aa7.76□□□□□ -1.17
PTPN12-210ENST00000464313 IGFLR1Q9H665 355 aa7.76□□□□□ -1.17
PTPN12-210ENST00000464313 ZMIZ1Q9ULJ6 1067 aa7.76□□□□□ -1.17
PTPN12-210ENST00000464313 ATG7O95352 703 aa7.75□□□□□ -1.17
PTPN12-210ENST00000464313 KCNQ4P56696 695 aa7.75□□□□□ -1.17
PTPN12-210ENST00000464313 PTK7Q13308 1070 aa7.75□□□□□ -1.17
PTPN12-210ENST00000464313 STK32AQ8WU08 396 aa7.75□□□□□ -1.17
PTPN12-210ENST00000464313 SUSD3Q96L08 255 aa7.75□□□□□ -1.17
PTPN12-210ENST00000464313 UBE2OQ9C0C9 1292 aaKnown RBP7.75□□□□□ -1.17
PTPN12-210ENST00000464313 FAM196BA6NMK8 535 aa7.74□□□□□ -1.17
PTPN12-210ENST00000464313 ZBTB7BO15156 539 aaPredicted RBP7.74□□□□□ -1.17
PTPN12-210ENST00000464313 C1orf53Q5VUE5 145 aa7.74□□□□□ -1.17
PTPN12-210ENST00000464313 LARP1Q6PKG0 1096 aaKnown RBP7.74□□□□□ -1.17
PTPN12-210ENST00000464313 TRIM50Q86XT4 487 aa7.74□□□□□ -1.17
PTPN12-210ENST00000464313 JPH1Q9HDC5 661 aaPredicted RBP7.74□□□□□ -1.17
PTPN12-210ENST00000464313 SLC6A14Q9UN76 642 aa7.74□□□□□ -1.17
PTPN12-210ENST00000464313 NOVA2Q9UNW9 492 aaKnown RBP7.74□□□□□ -1.17
PTPN12-210ENST00000464313 ACIN1Q9UKV3 1341 aaKnown RBP7.74□□□□□ -1.17
PTPN12-210ENST00000464313 ATP1A2P50993 1020 aa7.73□□□□□ -1.17
PTPN12-210ENST00000464313 IRAK1P51617 712 aa7.73□□□□□ -1.17
PTPN12-210ENST00000464313 PSMA6P60900 246 aaKnown RBP7.73□□□□□ -1.17
PTPN12-210ENST00000464313 CCDC102BQ68D86 513 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms