RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 ITGB2P05107 769 aa8.89□□□□□ -0.99
ITGB1-208ENST00000464001 SUZ12Q15022 739 aaKnown RBP8.89□□□□□ -0.99
ITGB1-208ENST00000464001 IER5Q5VY09 327 aa8.89□□□□□ -0.99
ITGB1-208ENST00000464001 MDFIQ99750 246 aa8.89□□□□□ -0.99
ITGB1-208ENST00000464001 CDCA8Q53HL2 280 aa8.88□□□□□ -0.99
ITGB1-208ENST00000464001 VTI1AQ96AJ9 217 aa8.88□□□□□ -0.99
ITGB1-208ENST00000464001 TGFBR3LH3BV60 316 aa8.87□□□□□ -0.99
ITGB1-208ENST00000464001 FOXO3O43524 673 aa8.87□□□□□ -0.99
ITGB1-208ENST00000464001 RAB44Q7Z6P3 723 aaPredicted RBP8.87□□□□□ -0.99
ITGB1-208ENST00000464001 EFCC1Q9HA90 598 aa8.87□□□□□ -0.99
ITGB1-208ENST00000464001 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.87□□□□□ -0.99
ITGB1-208ENST00000464001 WEE1P30291 646 aa8.86□□□□□ -0.99
ITGB1-208ENST00000464001 BHMTQ93088 406 aa8.86□□□□□ -0.99
ITGB1-208ENST00000464001 SPDYE3A6NKU9 549 aa8.85□□□□□ -0.99
ITGB1-208ENST00000464001 PROCP04070 461 aa8.85□□□□□ -0.99
ITGB1-208ENST00000464001 ADH7P40394 386 aa8.85□□□□□ -0.99
ITGB1-208ENST00000464001 TRIM11Q96F44 468 aa8.85□□□□□ -0.99
ITGB1-208ENST00000464001 PLVAPQ9BX97 442 aa8.85□□□□□ -0.99
ITGB1-208ENST00000464001 NOVA2Q9UNW9 492 aaKnown RBP8.85□□□□□ -0.99
ITGB1-208ENST00000464001 EPB42P16452 691 aa8.84□□□□□ -0.99
ITGB1-208ENST00000464001 M0R082 166 aa8.83□□□□□ -1
ITGB1-208ENST00000464001 ZNF417Q8TAU3 575 aa8.83□□□□□ -1
ITGB1-208ENST00000464001 PNMA5Q96PV4 448 aa8.83□□□□□ -1
ITGB1-208ENST00000464001 ZNF587Q96SQ5 575 aaPredicted RBP8.83□□□□□ -1
ITGB1-208ENST00000464001 ZMYND15Q9H091 742 aa8.83□□□□□ -1
ITGB1-208ENST00000464001 DMGDHQ9UI17 866 aaKnown RBP8.83□□□□□ -1
ITGB1-208ENST00000464001 BCS1LQ9Y276 419 aa8.83□□□□□ -1
ITGB1-208ENST00000464001 DGKZQ13574 1117 aa8.82□□□□□ -1
ITGB1-208ENST00000464001 CCINQ13939 588 aa8.82□□□□□ -1
ITGB1-208ENST00000464001 MICALL1Q8N3F8 863 aa8.82□□□□□ -1
ITGB1-208ENST00000464001 GSX2Q9BZM3 304 aa8.82□□□□□ -1
ITGB1-208ENST00000464001 UBE2OQ9C0C9 1292 aaKnown RBP8.82□□□□□ -1
ITGB1-208ENST00000464001 PRDM6Q9NQX0 595 aa8.82□□□□□ -1
ITGB1-208ENST00000464001 KLK14Q9P0G3 267 aa8.82□□□□□ -1
ITGB1-208ENST00000464001 STARD13Q9Y3M8 1113 aa8.82□□□□□ -1
ITGB1-208ENST00000464001 C1QTNF9BB2RNN3 333 aa8.81□□□□□ -1
ITGB1-208ENST00000464001 SPATA31C1P0DKV0 1188 aa8.81□□□□□ -1
ITGB1-208ENST00000464001 IDH3AP50213 366 aa8.81□□□□□ -1
ITGB1-208ENST00000464001 TBC1D8BQ0IIM8 1120 aa8.81□□□□□ -1
ITGB1-208ENST00000464001 ELOAQ14241 798 aaKnown RBP8.81□□□□□ -1
ITGB1-208ENST00000464001 SWI5Q1ZZU3 235 aa8.81□□□□□ -1
ITGB1-208ENST00000464001 C11orf91Q3C1V1 193 aa8.81□□□□□ -1
ITGB1-208ENST00000464001 PRRT3Q5FWE3 981 aa8.81□□□□□ -1
ITGB1-208ENST00000464001 MYO19Q96H55 970 aa8.81□□□□□ -1
ITGB1-208ENST00000464001 IGFLR1Q9H665 355 aa8.81□□□□□ -1
ITGB1-208ENST00000464001 QTRT2Q9H974 415 aaKnown RBP8.81□□□□□ -1
ITGB1-208ENST00000464001 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.81□□□□□ -1
ITGB1-208ENST00000464001 ACIN1Q9UKV3 1341 aaKnown RBP8.8□□□□□ -1
ITGB1-208ENST00000464001 CD163Q86VB7 1156 aa8.8□□□□□ -1
ITGB1-208ENST00000464001 ALBP02768 609 aa8.79□□□□□ -1
ITGB1-208ENST00000464001 INPP5BP32019 993 aa8.79□□□□□ -1
ITGB1-208ENST00000464001 BAG6P46379 1132 aa8.79□□□□□ -1
ITGB1-208ENST00000464001 ARSDP51689 593 aa8.79□□□□□ -1
ITGB1-208ENST00000464001 C11orf16Q9NQ32 467 aa8.79□□□□□ -1
ITGB1-208ENST00000464001 MICAL2O94851 1124 aa8.78□□□□□ -1
ITGB1-208ENST00000464001 NFKB1P19838 968 aa8.78□□□□□ -1
ITGB1-208ENST00000464001 C20orf204Q6ZNR8 217 aa8.78□□□□□ -1
ITGB1-208ENST00000464001 SLC6A14Q9UN76 642 aa8.78□□□□□ -1
ITGB1-208ENST00000464001 LILRB5O75023 590 aa8.77□□□□□ -1.01
ITGB1-208ENST00000464001 ADAM23O75077 832 aa8.77□□□□□ -1.01
ITGB1-208ENST00000464001 CHRNA4P43681 627 aa8.77□□□□□ -1.01
ITGB1-208ENST00000464001 TRIM28Q13263 835 aaKnown RBP8.77□□□□□ -1.01
ITGB1-208ENST00000464001 COL9A3Q14050 684 aaPredicted RBP8.77□□□□□ -1.01
ITGB1-208ENST00000464001 PCSK7Q16549 785 aa8.77□□□□□ -1.01
ITGB1-208ENST00000464001 C8orf86Q6ZUL3 223 aa8.77□□□□□ -1.01
ITGB1-208ENST00000464001 IFT43Q96FT9 208 aa8.77□□□□□ -1.01
ITGB1-208ENST00000464001 PRIMPOLQ96LW4 560 aa8.77□□□□□ -1.01
ITGB1-208ENST00000464001 DNAJB12Q9NXW2 375 aaKnown RBP8.77□□□□□ -1.01
ITGB1-208ENST00000464001 ZMIZ1Q9ULJ6 1067 aa8.77□□□□□ -1.01
ITGB1-208ENST00000464001 FKBP5Q13451 457 aaPredicted RBP8.76□□□□□ -1.01
ITGB1-208ENST00000464001 CCDC97Q96F63 343 aaPredicted RBP8.76□□□□□ -1.01
ITGB1-208ENST00000464001 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.75□□□□□ -1.01
ITGB1-208ENST00000464001 PRMT3O60678 531 aa8.75□□□□□ -1.01
ITGB1-208ENST00000464001 ATG7O95352 703 aa8.75□□□□□ -1.01
ITGB1-208ENST00000464001 MAP3K6O95382 1288 aa8.75□□□□□ -1.01
ITGB1-208ENST00000464001 APBA3O96018 575 aa8.75□□□□□ -1.01
ITGB1-208ENST00000464001 NID1P14543 1247 aa8.75□□□□□ -1.01
ITGB1-208ENST00000464001 SRPK2P78362 688 aaKnown RBP8.75□□□□□ -1.01
ITGB1-208ENST00000464001 LRFN2Q9ULH4 789 aa8.75□□□□□ -1.01
ITGB1-208ENST00000464001 K7ELQ4 463 aaPredicted RBP8.74□□□□□ -1.01
ITGB1-208ENST00000464001 GRNP28799 593 aaKnown RBP8.74□□□□□ -1.01
ITGB1-208ENST00000464001 TRAPPC3LQ5T215 181 aa8.74□□□□□ -1.01
ITGB1-208ENST00000464001 STK32AQ8WU08 396 aa8.74□□□□□ -1.01
ITGB1-208ENST00000464001 JPH1Q9HDC5 661 aaPredicted RBP8.74□□□□□ -1.01
ITGB1-208ENST00000464001 SERPINA10Q9UK55 444 aa8.74□□□□□ -1.01
ITGB1-208ENST00000464001 LOC100996750A0A140TA64 210 aa8.73□□□□□ -1.01
ITGB1-208ENST00000464001 GATA4P43694 442 aa8.73□□□□□ -1.01
ITGB1-208ENST00000464001 FAM69CQ0P6D2 419 aa8.73□□□□□ -1.01
ITGB1-208ENST00000464001 OCLNQ16625 522 aa8.73□□□□□ -1.01
ITGB1-208ENST00000464001 COX20Q5RI15 118 aa8.73□□□□□ -1.01
ITGB1-208ENST00000464001 PSAPL1Q6NUJ1 521 aa8.73□□□□□ -1.01
ITGB1-208ENST00000464001 KRT25Q7Z3Z0 450 aa8.73□□□□□ -1.01
ITGB1-208ENST00000464001 TREML1Q86YW5 311 aa8.73□□□□□ -1.01
ITGB1-208ENST00000464001 NUDT8Q8WV74 236 aa8.73□□□□□ -1.01
ITGB1-208ENST00000464001 NACC1Q96RE7 527 aa8.73□□□□□ -1.01
ITGB1-208ENST00000464001 KRTAP4-6Q9BYQ5 205 aa8.73□□□□□ -1.01
ITGB1-208ENST00000464001 RTCBQ9Y3I0 505 aaKnown RBP8.73□□□□□ -1.01
ITGB1-208ENST00000464001 OPLAHO14841 1288 aa8.72□□□□□ -1.01
ITGB1-208ENST00000464001 RGS9O75916 674 aaPredicted RBP8.72□□□□□ -1.01
ITGB1-208ENST00000464001 FURINP09958 794 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms