RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 CRY2Q49AN0 593 aa16.77■□□□□ 0.27
XRN1-203ENST00000463916 PPP1R42Q7Z4L9 355 aa16.77■□□□□ 0.27
XRN1-203ENST00000463916 C7orf43Q8WVR3 580 aa16.77■□□□□ 0.27
XRN1-203ENST00000463916 FANCIQ9NVI1 1328 aa16.77■□□□□ 0.27
XRN1-203ENST00000463916 UTP14AQ9BVJ6 771 aaKnown RBP16.76■□□□□ 0.27
XRN1-203ENST00000463916 RNF181Q9P0P0 153 aa16.76■□□□□ 0.27
XRN1-203ENST00000463916 ANKRD36CQ5JPF3 1778 aa16.76■□□□□ 0.27
XRN1-203ENST00000463916 HSP90AB3PQ58FF7 597 aa16.76■□□□□ 0.27
XRN1-203ENST00000463916 OLFM4Q6UX06 510 aa16.76■□□□□ 0.27
XRN1-203ENST00000463916 ATP5J2-PTCD1G3V325 749 aa16.75■□□□□ 0.27
XRN1-203ENST00000463916 TWISTNBQ3B726 338 aaPredicted RBP16.75■□□□□ 0.27
XRN1-203ENST00000463916 CCDC30Q5VVM6 783 aa16.75■□□□□ 0.27
XRN1-203ENST00000463916 ISCA1Q9BUE6 129 aa16.74■□□□□ 0.27
XRN1-203ENST00000463916 GPBP1L1Q9HC44 474 aaPredicted RBP16.74■□□□□ 0.27
XRN1-203ENST00000463916 SLC10A5Q5PT55 438 aa16.74■□□□□ 0.27
XRN1-203ENST00000463916 ARFGEF2Q9Y6D5 1785 aa16.74■□□□□ 0.27
XRN1-203ENST00000463916 RIC1Q4ADV7 1423 aa16.74■□□□□ 0.27
XRN1-203ENST00000463916 LMNB1P20700 586 aa16.73■□□□□ 0.27
XRN1-203ENST00000463916 SLC51AQ86UW1 340 aa16.73■□□□□ 0.27
XRN1-203ENST00000463916 TRMT112Q9UI30 125 aaKnown RBP16.73■□□□□ 0.27
XRN1-203ENST00000463916 FER1L6Q2WGJ9 1857 aa16.73■□□□□ 0.27
XRN1-203ENST00000463916 HCLS1P14317 486 aaPredicted RBP16.73■□□□□ 0.27
XRN1-203ENST00000463916 HOXA10P31260 410 aaPredicted RBP16.73■□□□□ 0.27
XRN1-203ENST00000463916 ZNF521Q96K83 1311 aa16.72■□□□□ 0.27
XRN1-203ENST00000463916 ALDH1B1P30837 517 aa16.72■□□□□ 0.27
XRN1-203ENST00000463916 EXOSC9Q06265 439 aaKnown RBP16.72■□□□□ 0.27
XRN1-203ENST00000463916 RIC3Q7Z5B4 369 aa16.72■□□□□ 0.27
XRN1-203ENST00000463916 GOLGA2Q08379 1002 aa16.71■□□□□ 0.27
XRN1-203ENST00000463916 CCDC88AQ3V6T2 1871 aa16.71■□□□□ 0.27
XRN1-203ENST00000463916 G2E3Q7L622 706 aa16.71■□□□□ 0.27
XRN1-203ENST00000463916 NLRP3Q96P20 1036 aa16.71■□□□□ 0.27
XRN1-203ENST00000463916 VAMP4O75379 141 aa16.71■□□□□ 0.27
XRN1-203ENST00000463916 RPGRQ92834 1020 aaKnown RBP16.71■□□□□ 0.27
XRN1-203ENST00000463916 FAM89AQ96GI7 184 aa16.71■□□□□ 0.27
XRN1-203ENST00000463916 SH3TC1Q8TE82 1336 aa16.7■□□□□ 0.26
XRN1-203ENST00000463916 TRIM28Q13263 835 aaKnown RBP16.7■□□□□ 0.26
XRN1-203ENST00000463916 RNF123Q5XPI4 1314 aa16.7■□□□□ 0.26
XRN1-203ENST00000463916 CCER2I3L3R5 266 aa16.69■□□□□ 0.26
XRN1-203ENST00000463916 SLC4A2P04920 1241 aa16.69■□□□□ 0.26
XRN1-203ENST00000463916 RTL5Q5HYW3 569 aaPredicted RBP16.69■□□□□ 0.26
XRN1-203ENST00000463916 CHMP4AQ9BY43 222 aa16.69■□□□□ 0.26
XRN1-203ENST00000463916 TAOK3Q9H2K8 898 aa16.69■□□□□ 0.26
XRN1-203ENST00000463916 C1QTNF8P60827 252 aa16.69■□□□□ 0.26
XRN1-203ENST00000463916 MYD88Q99836 296 aa16.69■□□□□ 0.26
XRN1-203ENST00000463916 STK31Q9BXU1 1019 aa16.69■□□□□ 0.26
XRN1-203ENST00000463916 NMRK2Q9NPI5 230 aa16.69■□□□□ 0.26
XRN1-203ENST00000463916 LTBP3Q9NS15 1303 aa16.69■□□□□ 0.26
XRN1-203ENST00000463916 KIF3CO14782 793 aa16.68■□□□□ 0.26
XRN1-203ENST00000463916 CCDC93Q567U6 631 aa16.68■□□□□ 0.26
XRN1-203ENST00000463916 SOGA3Q5TF21 947 aa16.68■□□□□ 0.26
XRN1-203ENST00000463916 CRAMP1Q96RY5 1269 aa16.68■□□□□ 0.26
XRN1-203ENST00000463916 MAP3K2Q9Y2U5 619 aa16.68■□□□□ 0.26
XRN1-203ENST00000463916 CEP350Q5VT06 3117 aa16.68■□□□□ 0.26
XRN1-203ENST00000463916 PI4KAP2A4QPH2 592 aa16.68■□□□□ 0.26
XRN1-203ENST00000463916 PI4KAP1Q8N8J0 262 aa16.68■□□□□ 0.26
XRN1-203ENST00000463916 RBM17Q96I25 401 aaKnown RBP16.68■□□□□ 0.26
XRN1-203ENST00000463916 LAMB2P55268 1798 aa16.68■□□□□ 0.26
XRN1-203ENST00000463916 SNED1Q8TER0 1413 aa16.67■□□□□ 0.26
XRN1-203ENST00000463916 METTL22Q9BUU2 404 aaPredicted RBP16.67■□□□□ 0.26
XRN1-203ENST00000463916 MYH16Q9H6N6 1097 aa16.67■□□□□ 0.26
XRN1-203ENST00000463916 DDX58O95786 925 aaKnown RBP16.66■□□□□ 0.26
XRN1-203ENST00000463916 KSR2Q6VAB6 950 aa16.66■□□□□ 0.26
XRN1-203ENST00000463916 JARID2Q92833 1246 aaPredicted RBP16.66■□□□□ 0.26
XRN1-203ENST00000463916 DDX60Q8IY21 1712 aaKnown RBP16.66■□□□□ 0.26
XRN1-203ENST00000463916 ABCC4O15439 1325 aa16.66■□□□□ 0.26
XRN1-203ENST00000463916 ZNF277Q9NRM2 450 aaPredicted RBP16.66■□□□□ 0.26
XRN1-203ENST00000463916 IGKV5-2P06315 115 aa16.65■□□□□ 0.26
XRN1-203ENST00000463916 FKBP4Q02790 459 aaKnown RBP eCLIP16.65■□□□□ 0.26
XRN1-203ENST00000463916 DIEXFQ68CQ4 756 aaKnown RBP16.65■□□□□ 0.26
XRN1-203ENST00000463916 RTKN2Q8IZC4 609 aa16.65■□□□□ 0.26
XRN1-203ENST00000463916 TIAM2Q8IVF5 1701 aa16.65■□□□□ 0.26
XRN1-203ENST00000463916 TAF1P21675 1872 aa16.65■□□□□ 0.26
XRN1-203ENST00000463916 PPEF1O14829 653 aaPredicted RBP16.65■□□□□ 0.26
XRN1-203ENST00000463916 FLIIQ13045 1269 aa16.65■□□□□ 0.26
XRN1-203ENST00000463916 MIER1Q8N108 512 aa16.65■□□□□ 0.26
XRN1-203ENST00000463916 ZBTB38Q8NAP3 1195 aaPredicted RBP16.65■□□□□ 0.26
XRN1-203ENST00000463916 CCDC191Q8NCU4 936 aa16.65■□□□□ 0.26
XRN1-203ENST00000463916 ZC3H4Q9UPT8 1303 aaKnown RBP16.64■□□□□ 0.26
XRN1-203ENST00000463916 IRS4O14654 1257 aaPredicted RBP16.64■□□□□ 0.25
XRN1-203ENST00000463916 DICER1Q9UPY3 1922 aaKnown RBP16.64■□□□□ 0.25
XRN1-203ENST00000463916 GLTPD2A6NH11 291 aa16.63■□□□□ 0.25
XRN1-203ENST00000463916 RRAGCQ9HB90 399 aa16.63■□□□□ 0.25
XRN1-203ENST00000463916 CWF19L2Q2TBE0 894 aaKnown RBP16.63■□□□□ 0.25
XRN1-203ENST00000463916 CDCA7LQ96GN5 454 aa16.63■□□□□ 0.25
XRN1-203ENST00000463916 CWC25Q9NXE8 425 aaPredicted RBP16.63■□□□□ 0.25
XRN1-203ENST00000463916 KDM2BQ8NHM5 1336 aa16.63■□□□□ 0.25
XRN1-203ENST00000463916 COL4A1P02462 1669 aa16.62■□□□□ 0.25
XRN1-203ENST00000463916 SF3B3Q15393 1217 aaKnown RBP16.62■□□□□ 0.25
XRN1-203ENST00000463916 DDX46Q7L014 1031 aaKnown RBP16.62■□□□□ 0.25
XRN1-203ENST00000463916 ATP6V0A2Q9Y487 856 aa16.62■□□□□ 0.25
XRN1-203ENST00000463916 CC2D2BQ6DHV5 1058 aa16.61■□□□□ 0.25
XRN1-203ENST00000463916 PSMD1Q99460 953 aa16.61■□□□□ 0.25
XRN1-203ENST00000463916 PCCAP05165 728 aaPredicted RBP16.61■□□□□ 0.25
XRN1-203ENST00000463916 FKBP5Q13451 457 aaPredicted RBP16.61■□□□□ 0.25
XRN1-203ENST00000463916 NEURL1BA8MQ27 555 aa16.6■□□□□ 0.25
XRN1-203ENST00000463916 BBOX1O75936 387 aa16.6■□□□□ 0.25
XRN1-203ENST00000463916 SLFN5Q08AF3 891 aa16.6■□□□□ 0.25
XRN1-203ENST00000463916 GRAPQ13588 217 aa16.6■□□□□ 0.25
XRN1-203ENST00000463916 GRAPLQ8TC17 118 aaPredicted RBP16.6■□□□□ 0.25
XRN1-203ENST00000463916 CELF1Q92879 486 aaKnown RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms